RNA–Protein interactions for RNA: ENST00000534638.1

ME3-211, Transcript of malic enzyme 3, humanhuman

TSL 4

Gene ME3, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-211ENST00000534638 ZBTB47Q9UFB7 747 aaPredicted RBP7.52□□□□□ -1.21
ME3-211ENST00000534638 KDM2AQ9Y2K7 1162 aa7.51□□□□□ -1.21
ME3-211ENST00000534638 PKD2Q13563 968 aa7.49□□□□□ -1.21
ME3-211ENST00000534638 IFNLR1Q8IU57 520 aaPredicted RBP7.49□□□□□ -1.21
ME3-211ENST00000534638 KLHL34Q8N239 644 aa7.49□□□□□ -1.21
ME3-211ENST00000534638 PAK3O75914 559 aaPredicted RBP7.48□□□□□ -1.21
ME3-211ENST00000534638 ZRANB1Q9UGI0 708 aa7.48□□□□□ -1.21
ME3-211ENST00000534638 TSPYL2Q9H2G4 693 aaPredicted RBP7.46□□□□□ -1.22
ME3-211ENST00000534638 NUBP1P53384 320 aa7.45□□□□□ -1.22
ME3-211ENST00000534638 RASEFQ8IZ41 740 aa7.45□□□□□ -1.22
ME3-211ENST00000534638 PAXIP1Q6ZW49 1069 aaPredicted RBP7.43□□□□□ -1.22
ME3-211ENST00000534638 ZNF579Q8NAF0 562 aaKnown RBP7.42□□□□□ -1.22
ME3-211ENST00000534638 CFAP44Q96MT7 982 aa7.42□□□□□ -1.22
ME3-211ENST00000534638 GABBR2O75899 941 aa7.4□□□□□ -1.22
ME3-211ENST00000534638 SPOCK2Q92563 424 aa7.4□□□□□ -1.22
ME3-211ENST00000534638 PHF12Q96QT6 1004 aa7.4□□□□□ -1.22
ME3-211ENST00000534638 TIMELESSQ9UNS1 1208 aa7.4□□□□□ -1.22
ME3-211ENST00000534638 DCAF8Q5TAQ9 597 aa7.39□□□□□ -1.23
ME3-211ENST00000534638 FAM212AQ96EL1 285 aa7.39□□□□□ -1.23
ME3-211ENST00000534638 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.39□□□□□ -1.23
ME3-211ENST00000534638 CCDC61Q9Y6R9 512 aa7.38□□□□□ -1.23
ME3-211ENST00000534638 BBXQ8WY36 941 aaPredicted RBP7.37□□□□□ -1.23
ME3-211ENST00000534638 CLCN6P51797 869 aa7.36□□□□□ -1.23
ME3-211ENST00000534638 TULP1O00294 542 aaPredicted RBP7.35□□□□□ -1.23
ME3-211ENST00000534638 GSE1Q14687 1217 aa7.34□□□□□ -1.23
ME3-211ENST00000534638 TSHZ2Q9NRE2 1034 aa7.34□□□□□ -1.23
ME3-211ENST00000534638 GALR2O43603 387 aaPredicted RBP7.33□□□□□ -1.24
ME3-211ENST00000534638 ECM2O94769 699 aaPredicted RBP7.33□□□□□ -1.24
ME3-211ENST00000534638 KIF12Q96FN5 646 aa7.33□□□□□ -1.24
ME3-211ENST00000534638 CIZ1Q9ULV3 898 aaPredicted RBP7.32□□□□□ -1.24
ME3-211ENST00000534638 MAP3K13O43283 966 aa7.31□□□□□ -1.24
ME3-211ENST00000534638 MS4A3Q96HJ5 214 aa7.31□□□□□ -1.24
ME3-211ENST00000534638 PYGBP11216 843 aa7.3□□□□□ -1.24
ME3-211ENST00000534638 RGL2O15211 777 aa7.27□□□□□ -1.25
ME3-211ENST00000534638 DCBLD2Q96PD2 775 aa7.27□□□□□ -1.25
ME3-211ENST00000534638 PCDHB13Q9Y5F0 798 aa7.27□□□□□ -1.25
ME3-211ENST00000534638 SGIP1Q9BQI5 828 aa7.26□□□□□ -1.25
ME3-211ENST00000534638 SPRYD3Q8NCJ5 442 aa7.25□□□□□ -1.25
ME3-211ENST00000534638 POTEIP0CG38 1075 aa7.24□□□□□ -1.25
ME3-211ENST00000534638 CHRM1P11229 460 aaPredicted RBP7.24□□□□□ -1.25
ME3-211ENST00000534638 NBR1Q14596 966 aa7.24□□□□□ -1.25
ME3-211ENST00000534638 IFNL1Q8IU54 200 aa7.23□□□□□ -1.25
ME3-211ENST00000534638 DAXXQ9UER7 740 aaPredicted RBP7.23□□□□□ -1.25
ME3-211ENST00000534638 TRPC6Q9Y210 931 aa7.23□□□□□ -1.25
ME3-211ENST00000534638 GTF3C3Q9Y5Q9 886 aa7.23□□□□□ -1.25
ME3-211ENST00000534638 TRIM41Q8WV44 630 aa7.22□□□□□ -1.25
ME3-211ENST00000534638 PCDHB8Q9UN66 801 aa7.21□□□□□ -1.26
ME3-211ENST00000534638 TIE1P35590 1138 aa7.19□□□□□ -1.26
ME3-211ENST00000534638 ZNF467Q7Z7K2 595 aaPredicted RBP7.19□□□□□ -1.26
ME3-211ENST00000534638 BMP2KQ9NSY1 1161 aaPredicted RBP7.19□□□□□ -1.26
ME3-211ENST00000534638 ATMINO43313 823 aaPredicted RBP7.18□□□□□ -1.26
ME3-211ENST00000534638 CHGAP10645 457 aaKnown RBP7.18□□□□□ -1.26
ME3-211ENST00000534638 ARXQ96QS3 562 aa7.18□□□□□ -1.26
ME3-211ENST00000534638 ASTLQ6HA08 431 aaPredicted RBP7.17□□□□□ -1.26
ME3-211ENST00000534638 TTLL13PA6NNM8 815 aa7.16□□□□□ -1.26
ME3-211ENST00000534638 ATN1P54259 1190 aaPredicted RBP7.16□□□□□ -1.26
ME3-211ENST00000534638 PELP1Q8IZL8 1130 aaKnown RBP7.16□□□□□ -1.26
ME3-211ENST00000534638 TMEM106CQ9BVX2 250 aa7.15□□□□□ -1.26
ME3-211ENST00000534638 PSEN1P49768 467 aa7.13□□□□□ -1.27
ME3-211ENST00000534638 DNAJC5Q9H3Z4 198 aa7.13□□□□□ -1.27
ME3-211ENST00000534638 PDAP1Q13442 181 aaKnown RBP7.12□□□□□ -1.27
ME3-211ENST00000534638 RNF25Q96BH1 459 aaPredicted RBP7.12□□□□□ -1.27
ME3-211ENST00000534638 RIOK3O14730 519 aaKnown RBP7.11□□□□□ -1.27
ME3-211ENST00000534638 LHX8Q68G74 356 aa7.11□□□□□ -1.27
ME3-211ENST00000534638 SLC39A7Q92504 469 aa7.11□□□□□ -1.27
ME3-211ENST00000534638 TRIM35Q9UPQ4 493 aa7.11□□□□□ -1.27
ME3-211ENST00000534638 TMEM132AQ24JP5 1023 aa7.1□□□□□ -1.27
ME3-211ENST00000534638 C7P10643 843 aa7.09□□□□□ -1.27
ME3-211ENST00000534638 METRNQ9UJH8 293 aa7.09□□□□□ -1.27
ME3-211ENST00000534638 VGFO15240 615 aaPredicted RBP7.08□□□□□ -1.28
ME3-211ENST00000534638 C14orf37Q86TY3 774 aa7.07□□□□□ -1.28
ME3-211ENST00000534638 HOMEZQ8IX15 550 aa7.06□□□□□ -1.28
ME3-211ENST00000534638 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.05□□□□□ -1.28
ME3-211ENST00000534638 GOLGA2Q08379 1002 aa7.05□□□□□ -1.28
ME3-211ENST00000534638 IER5LQ5T953 404 aa7.05□□□□□ -1.28
ME3-211ENST00000534638 ZFP91Q96JP5 570 aaPredicted RBP7.05□□□□□ -1.28
ME3-211ENST00000534638 CABP2Q9NPB3 220 aa7.04□□□□□ -1.28
ME3-211ENST00000534638 SEC24BO95487 1268 aa7.03□□□□□ -1.28
ME3-211ENST00000534638 MKRN3Q13064 507 aaKnown RBP7.03□□□□□ -1.28
ME3-211ENST00000534638 POTEFA5A3E0 1075 aa7.02□□□□□ -1.29
ME3-211ENST00000534638 ERICH6Q7L0X2 663 aa7.02□□□□□ -1.29
ME3-211ENST00000534638 HS6ST3Q8IZP7 471 aa7.02□□□□□ -1.29
ME3-211ENST00000534638 COLQQ9Y215 455 aaPredicted RBP7.02□□□□□ -1.29
ME3-211ENST00000534638 POTEB2H3BUK9 544 aa7.01□□□□□ -1.29
ME3-211ENST00000534638 PLCG2P16885 1265 aa7□□□□□ -1.29
ME3-211ENST00000534638 IRX5P78411 483 aaPredicted RBP7□□□□□ -1.29
ME3-211ENST00000534638 BCL11BQ9C0K0 894 aaPredicted RBP7□□□□□ -1.29
ME3-211ENST00000534638 STK25O00506 426 aa6.99□□□□□ -1.29
ME3-211ENST00000534638 NKX1-1Q15270 411 aaPredicted RBP6.99□□□□□ -1.29
ME3-211ENST00000534638 EFCAB3Q8N7B9 438 aa6.99□□□□□ -1.29
ME3-211ENST00000534638 OCEL1Q9H607 264 aa6.99□□□□□ -1.29
ME3-211ENST00000534638 STK24Q9Y6E0 443 aa6.99□□□□□ -1.29
ME3-211ENST00000534638 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.98□□□□□ -1.29
ME3-211ENST00000534638 POTEJP0CG39 1038 aa6.95□□□□□ -1.3
ME3-211ENST00000534638 PDCD7Q8N8D1 485 aaKnown RBP6.95□□□□□ -1.3
ME3-211ENST00000534638 SOX12O15370 315 aa6.94□□□□□ -1.3
ME3-211ENST00000534638 SUPT5HO00267 1087 aaKnown RBP6.93□□□□□ -1.3
ME3-211ENST00000534638 GTPBP6O43824 516 aaPredicted RBP6.93□□□□□ -1.3
ME3-211ENST00000534638 ILDR1Q86SU0 546 aaPredicted RBP6.93□□□□□ -1.3
ME3-211ENST00000534638 MAMSTRQ6ZN01 415 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms