RNA–Protein interactions for RNA: ENST00000534049.5

ITGB1-219, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-219ENST00000534049 GABBR2O75899 941 aa11.91□□□□□ -0.5
ITGB1-219ENST00000534049 SPOCK2Q92563 424 aa11.91□□□□□ -0.5
ITGB1-219ENST00000534049 CCDC61Q9Y6R9 512 aa11.89□□□□□ -0.51
ITGB1-219ENST00000534049 GSE1Q14687 1217 aa11.87□□□□□ -0.51
ITGB1-219ENST00000534049 PHF12Q96QT6 1004 aa11.85□□□□□ -0.51
ITGB1-219ENST00000534049 DCAF8Q5TAQ9 597 aa11.84□□□□□ -0.51
ITGB1-219ENST00000534049 SGIP1Q9BQI5 828 aa11.8□□□□□ -0.52
ITGB1-219ENST00000534049 KIF12Q96FN5 646 aa11.78□□□□□ -0.52
ITGB1-219ENST00000534049 GALR2O43603 387 aaPredicted RBP11.75□□□□□ -0.53
ITGB1-219ENST00000534049 DCBLD2Q96PD2 775 aa11.75□□□□□ -0.53
ITGB1-219ENST00000534049 TRIM41Q8WV44 630 aa11.74□□□□□ -0.53
ITGB1-219ENST00000534049 MS4A3Q96HJ5 214 aa11.73□□□□□ -0.53
ITGB1-219ENST00000534049 MAP3K13O43283 966 aa11.72□□□□□ -0.53
ITGB1-219ENST00000534049 CIZ1Q9ULV3 898 aaPredicted RBP11.72□□□□□ -0.53
ITGB1-219ENST00000534049 CHRM1P11229 460 aaPredicted RBP11.71□□□□□ -0.53
ITGB1-219ENST00000534049 PCDHB13Q9Y5F0 798 aa11.71□□□□□ -0.53
ITGB1-219ENST00000534049 PYGBP11216 843 aa11.68□□□□□ -0.54
ITGB1-219ENST00000534049 ZNF467Q7Z7K2 595 aaPredicted RBP11.65□□□□□ -0.54
ITGB1-219ENST00000534049 TIE1P35590 1138 aa11.63□□□□□ -0.55
ITGB1-219ENST00000534049 ASTLQ6HA08 431 aaPredicted RBP11.61□□□□□ -0.55
ITGB1-219ENST00000534049 IFNL1Q8IU54 200 aa11.61□□□□□ -0.55
ITGB1-219ENST00000534049 POTEIP0CG38 1075 aa11.58□□□□□ -0.56
ITGB1-219ENST00000534049 ATMINO43313 823 aaPredicted RBP11.56□□□□□ -0.56
ITGB1-219ENST00000534049 BMP2KQ9NSY1 1161 aaPredicted RBP11.55□□□□□ -0.56
ITGB1-219ENST00000534049 TTLL13PA6NNM8 815 aa11.52□□□□□ -0.57
ITGB1-219ENST00000534049 SLC39A7Q92504 469 aa11.52□□□□□ -0.57
ITGB1-219ENST00000534049 PCDHB8Q9UN66 801 aa11.52□□□□□ -0.57
ITGB1-219ENST00000534049 TMEM106CQ9BVX2 250 aa11.51□□□□□ -0.57
ITGB1-219ENST00000534049 TRPC6Q9Y210 931 aa11.51□□□□□ -0.57
ITGB1-219ENST00000534049 C7P10643 843 aa11.5□□□□□ -0.57
ITGB1-219ENST00000534049 TAOK2Q9UL54 1235 aa11.5□□□□□ -0.57
ITGB1-219ENST00000534049 ATN1P54259 1190 aaPredicted RBP11.49□□□□□ -0.57
ITGB1-219ENST00000534049 PDAP1Q13442 181 aaKnown RBP11.49□□□□□ -0.57
ITGB1-219ENST00000534049 RIOK3O14730 519 aaKnown RBP11.46□□□□□ -0.57
ITGB1-219ENST00000534049 ECM2O94769 699 aaPredicted RBP11.46□□□□□ -0.57
ITGB1-219ENST00000534049 IER5LQ5T953 404 aa11.46□□□□□ -0.57
ITGB1-219ENST00000534049 PSEN1P49768 467 aa11.45□□□□□ -0.58
ITGB1-219ENST00000534049 TRIM35Q9UPQ4 493 aa11.45□□□□□ -0.58
ITGB1-219ENST00000534049 PKD2Q13563 968 aa11.43□□□□□ -0.58
ITGB1-219ENST00000534049 PELP1Q8IZL8 1130 aaKnown RBP11.43□□□□□ -0.58
ITGB1-219ENST00000534049 METRNQ9UJH8 293 aa11.43□□□□□ -0.58
ITGB1-219ENST00000534049 VGFO15240 615 aaPredicted RBP11.42□□□□□ -0.58
ITGB1-219ENST00000534049 GOLGA2Q08379 1002 aa11.42□□□□□ -0.58
ITGB1-219ENST00000534049 SEC24BO95487 1268 aa11.37□□□□□ -0.59
ITGB1-219ENST00000534049 LHX8Q68G74 356 aa11.37□□□□□ -0.59
ITGB1-219ENST00000534049 RNF25Q96BH1 459 aaPredicted RBP11.37□□□□□ -0.59
ITGB1-219ENST00000534049 MKRN3Q13064 507 aaKnown RBP11.35□□□□□ -0.59
ITGB1-219ENST00000534049 PLCG2P16885 1265 aa11.31□□□□□ -0.6
ITGB1-219ENST00000534049 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.3□□□□□ -0.6
ITGB1-219ENST00000534049 ZFP91Q96JP5 570 aaPredicted RBP11.3□□□□□ -0.6
ITGB1-219ENST00000534049 RGL2O15211 777 aa11.29□□□□□ -0.6
ITGB1-219ENST00000534049 MAMSTRQ6ZN01 415 aa11.29□□□□□ -0.6
ITGB1-219ENST00000534049 OCEL1Q9H607 264 aa11.29□□□□□ -0.6
ITGB1-219ENST00000534049 CABP2Q9NPB3 220 aa11.29□□□□□ -0.6
ITGB1-219ENST00000534049 IRX5P78411 483 aaPredicted RBP11.28□□□□□ -0.6
ITGB1-219ENST00000534049 AMER1Q5JTC6 1135 aaPredicted RBP11.26□□□□□ -0.61
ITGB1-219ENST00000534049 COLQQ9Y215 455 aaPredicted RBP11.24□□□□□ -0.61
ITGB1-219ENST00000534049 POTEFA5A3E0 1075 aa11.23□□□□□ -0.61
ITGB1-219ENST00000534049 STK25O00506 426 aa11.23□□□□□ -0.61
ITGB1-219ENST00000534049 BCL11BQ9C0K0 894 aaPredicted RBP11.23□□□□□ -0.61
ITGB1-219ENST00000534049 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.23□□□□□ -0.618e-14■□□□□ 11.3
ITGB1-219ENST00000534049 SCUBE2Q9NQ36 999 aa11.22□□□□□ -0.61
ITGB1-219ENST00000534049 SOX12O15370 315 aa11.21□□□□□ -0.61
ITGB1-219ENST00000534049 STK24Q9Y6E0 443 aa11.21□□□□□ -0.61
ITGB1-219ENST00000534049 POTEB2H3BUK9 544 aa11.2□□□□□ -0.62
ITGB1-219ENST00000534049 ILDR1Q86SU0 546 aaPredicted RBP11.2□□□□□ -0.62
ITGB1-219ENST00000534049 EFCAB3Q8N7B9 438 aa11.19□□□□□ -0.62
ITGB1-219ENST00000534049 L3MBTL3Q96JM7 780 aaPredicted RBP11.18□□□□□ -0.62
ITGB1-219ENST00000534049 PDCD7Q8N8D1 485 aaKnown RBP11.17□□□□□ -0.62
ITGB1-219ENST00000534049 HS6ST3Q8IZP7 471 aa11.15□□□□□ -0.62
ITGB1-219ENST00000534049 G3V3G9 751 aa11.13□□□□□ -0.63
ITGB1-219ENST00000534049 OTUD5Q96G74 571 aa11.13□□□□□ -0.63
ITGB1-219ENST00000534049 NLRP6P59044 892 aa11.12□□□□□ -0.63
ITGB1-219ENST00000534049 POTEJP0CG39 1038 aa11.11□□□□□ -0.63
ITGB1-219ENST00000534049 CHGAP10645 457 aaKnown RBP11.09□□□□□ -0.63
ITGB1-219ENST00000534049 C3orf67Q6ZVT6 689 aa11.07□□□□□ -0.64
ITGB1-219ENST00000534049 DNAJC5Q9H3Z4 198 aa11.07□□□□□ -0.64
ITGB1-219ENST00000534049 DCAF8L2P0C7V8 631 aa11.06□□□□□ -0.64
ITGB1-219ENST00000534049 RYDENQ9NUL5 291 aaKnown RBP11.06□□□□□ -0.64
ITGB1-219ENST00000534049 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.06□□□□□ -0.64
ITGB1-219ENST00000534049 PHF8Q9UPP1 1060 aa11.06□□□□□ -0.64
ITGB1-219ENST00000534049 BOLA1Q9Y3E2 137 aa11.06□□□□□ -0.64
ITGB1-219ENST00000534049 RTN4Q9NQC3 1192 aaKnown RBP11.05□□□□□ -0.64
ITGB1-219ENST00000534049 MFRPQ9BY79 579 aa11.03□□□□□ -0.64
ITGB1-219ENST00000534049 FBXO22Q8NEZ5 403 aa11.02□□□□□ -0.65
ITGB1-219ENST00000534049 DPY19L2Q6NUT2 758 aa11.01□□□□□ -0.65
ITGB1-219ENST00000534049 SLAIN1Q8ND83 568 aa11□□□□□ -0.65
ITGB1-219ENST00000534049 MS4A4AQ96JQ5 239 aa11□□□□□ -0.65
ITGB1-219ENST00000534049 TMEM121BQ9BXQ6 578 aaPredicted RBP10.99□□□□□ -0.65
ITGB1-219ENST00000534049 MICALL2Q8IY33 904 aa10.96□□□□□ -0.65
ITGB1-219ENST00000534049 SNPHO15079 494 aa10.93□□□□□ -0.66
ITGB1-219ENST00000534049 NKX1-1Q15270 411 aaPredicted RBP10.88□□□□□ -0.67
ITGB1-219ENST00000534049 BBXQ8WY36 941 aaPredicted RBP10.86□□□□□ -0.67
ITGB1-219ENST00000534049 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.82□□□□□ -0.68
ITGB1-219ENST00000534049 GTPBP6O43824 516 aaPredicted RBP10.8□□□□□ -0.68
ITGB1-219ENST00000534049 PPP1R37O75864 691 aa10.8□□□□□ -0.68
ITGB1-219ENST00000534049 FAM163AQ96GL9 167 aaPredicted RBP10.79□□□□□ -0.68
ITGB1-219ENST00000534049 DOK7Q18PE1 504 aa10.78□□□□□ -0.68
ITGB1-219ENST00000534049 TMC2Q8TDI7 906 aa10.78□□□□□ -0.68
ITGB1-219ENST00000534049 RIMBP2O15034 1052 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms