RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-215ENST00000533961 METRNQ9UJH8 293 aa12.61□□□□□ -0.39
RDX-215ENST00000533961 POTEGQ6S5H5 508 aa12.59□□□□□ -0.39
RDX-215ENST00000533961 ATMINO43313 823 aaPredicted RBP12.58□□□□□ -0.4
RDX-215ENST00000533961 MAMSTRQ6ZN01 415 aa12.57□□□□□ -0.4
RDX-215ENST00000533961 EHMT2Q96KQ7 1210 aa12.54□□□□□ -0.4
RDX-215ENST00000533961 PCDH10Q9P2E7 1040 aa12.54□□□□□ -0.4
RDX-215ENST00000533961 TSPYL2Q9H2G4 693 aaPredicted RBP12.52□□□□□ -0.41
RDX-215ENST00000533961 POTEJP0CG39 1038 aa12.48□□□□□ -0.41
RDX-215ENST00000533961 SCUBE2Q9NQ36 999 aa12.47□□□□□ -0.41
RDX-215ENST00000533961 CCDC61Q9Y6R9 512 aa12.47□□□□□ -0.41
RDX-215ENST00000533961 ATN1P54259 1190 aaPredicted RBP12.45□□□□□ -0.42
RDX-215ENST00000533961 PROM2Q8N271 834 aa12.43□□□□□ -0.42
RDX-215ENST00000533961 KIF12Q96FN5 646 aa12.42□□□□□ -0.42
RDX-215ENST00000533961 PLEKHG5O94827 1062 aa12.4□□□□□ -0.42
RDX-215ENST00000533961 FAM163AQ96GL9 167 aaPredicted RBP12.39□□□□□ -0.43
RDX-215ENST00000533961 BMP2KQ9NSY1 1161 aaPredicted RBP12.36□□□□□ -0.43
RDX-215ENST00000533961 TIE1P35590 1138 aa12.35□□□□□ -0.43
RDX-215ENST00000533961 MAP3K13O43283 966 aa12.32□□□□□ -0.44
RDX-215ENST00000533961 LCE2DQ5TA82 110 aaPredicted RBP12.32□□□□□ -0.44
RDX-215ENST00000533961 MIER1Q8N108 512 aa12.32□□□□□ -0.44
RDX-215ENST00000533961 POTEFA5A3E0 1075 aa12.3□□□□□ -0.44
RDX-215ENST00000533961 TRPC6Q9Y210 931 aa12.3□□□□□ -0.44
RDX-215ENST00000533961 SEC24BO95487 1268 aa12.28□□□□□ -0.44
RDX-215ENST00000533961 RASEFQ8IZ41 740 aa12.26□□□□□ -0.45
RDX-215ENST00000533961 TTLL13PA6NNM8 815 aa12.23□□□□□ -0.45
RDX-215ENST00000533961 SGIP1Q9BQI5 828 aa12.22□□□□□ -0.45
RDX-215ENST00000533961 IER5LQ5T953 404 aa12.21□□□□□ -0.45
RDX-215ENST00000533961 COLQQ9Y215 455 aaPredicted RBP12.21□□□□□ -0.45
RDX-215ENST00000533961 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
RDX-215ENST00000533961 TRIM35Q9UPQ4 493 aa12.17□□□□□ -0.46
RDX-215ENST00000533961 PCDHB13Q9Y5F0 798 aa12.17□□□□□ -0.46
RDX-215ENST00000533961 ZBTB47Q9UFB7 747 aaPredicted RBP12.16□□□□□ -0.46
RDX-215ENST00000533961 CDAN1Q8IWY9 1227 aa12.12□□□□□ -0.47
RDX-215ENST00000533961 SLAIN1Q8ND83 568 aa12.08□□□□□ -0.48
RDX-215ENST00000533961 NUBP1P53384 320 aa12.07□□□□□ -0.48
RDX-215ENST00000533961 IFNL1Q8IU54 200 aa12.06□□□□□ -0.48
RDX-215ENST00000533961 FAM212AQ96EL1 285 aa12.05□□□□□ -0.48
RDX-215ENST00000533961 TMEM106CQ9BVX2 250 aa12.05□□□□□ -0.48
RDX-215ENST00000533961 PLCG2P16885 1265 aa12.04□□□□□ -0.48
RDX-215ENST00000533961 ST18O60284 1047 aa12.03□□□□□ -0.48
RDX-215ENST00000533961 IRX5P78411 483 aaPredicted RBP11.97□□□□□ -0.49
RDX-215ENST00000533961 OCEL1Q9H607 264 aa11.94□□□□□ -0.5
RDX-215ENST00000533961 SNPHO15079 494 aa11.93□□□□□ -0.5
RDX-215ENST00000533961 TMEM121BQ9BXQ6 578 aaPredicted RBP11.93□□□□□ -0.5
RDX-215ENST00000533961 DCAF8Q5TAQ9 597 aa11.89□□□□□ -0.51
RDX-215ENST00000533961 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.89□□□□□ -0.51
RDX-215ENST00000533961 PYGBP11216 843 aa11.85□□□□□ -0.51
RDX-215ENST00000533961 MMRN1Q13201 1228 aa11.83□□□□□ -0.52
RDX-215ENST00000533961 SPNS2Q8IVW8 549 aa11.82□□□□□ -0.52
RDX-215ENST00000533961 PCDHB8Q9UN66 801 aa11.8□□□□□ -0.52
RDX-215ENST00000533961 MARVELD3Q96A59 401 aa11.78□□□□□ -0.52
RDX-215ENST00000533961 FKBP8Q14318 412 aa11.76□□□□□ -0.53
RDX-215ENST00000533961 GOLGA2Q08379 1002 aa11.75□□□□□ -0.53
RDX-215ENST00000533961 C3orf67Q6ZVT6 689 aa11.75□□□□□ -0.53
RDX-215ENST00000533961 L3MBTL3Q96JM7 780 aaPredicted RBP11.74□□□□□ -0.53
RDX-215ENST00000533961 ZNF467Q7Z7K2 595 aaPredicted RBP11.73□□□□□ -0.53
RDX-215ENST00000533961 FBXO3Q9UK99 471 aa11.73□□□□□ -0.53
RDX-215ENST00000533961 MKRN3Q13064 507 aaKnown RBP11.72□□□□□ -0.53
RDX-215ENST00000533961 PDCD7Q8N8D1 485 aaKnown RBP11.71□□□□□ -0.53
RDX-215ENST00000533961 GSE1Q14687 1217 aa11.7□□□□□ -0.54
RDX-215ENST00000533961 EMP3P54852 163 aa11.69□□□□□ -0.54
RDX-215ENST00000533961 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.65□□□□□ -0.546e-7■■■□□ 14.8
RDX-215ENST00000533961 KLHL34Q8N239 644 aa11.64□□□□□ -0.55
RDX-215ENST00000533961 CHRM1P11229 460 aaPredicted RBP11.63□□□□□ -0.55
RDX-215ENST00000533961 PSEN1P49768 467 aa11.6□□□□□ -0.55
RDX-215ENST00000533961 HS3ST6Q96QI5 342 aa11.6□□□□□ -0.55
RDX-215ENST00000533961 FAM205CA6NFA0 338 aa11.59□□□□□ -0.55
RDX-215ENST00000533961 KRTAP3-3Q9BYR6 98 aa11.56□□□□□ -0.56
RDX-215ENST00000533961 KRTAP3-2Q9BYR7 98 aa11.56□□□□□ -0.56
RDX-215ENST00000533961 POTEB3A0JP26 581 aa11.55□□□□□ -0.56
RDX-215ENST00000533961 POTEBQ6S5H4 581 aa11.55□□□□□ -0.56
RDX-215ENST00000533961 G3V3G9 751 aa11.54□□□□□ -0.56
RDX-215ENST00000533961 ILDR1Q86SU0 546 aaPredicted RBP11.54□□□□□ -0.56
RDX-215ENST00000533961 VASPP50552 380 aaPredicted RBP11.53□□□□□ -0.56
RDX-215ENST00000533961 PDAP1Q13442 181 aaKnown RBP11.52□□□□□ -0.57
RDX-215ENST00000533961 DPY19L2Q6NUT2 758 aa11.48□□□□□ -0.57
RDX-215ENST00000533961 BOLA1Q9Y3E2 137 aa11.48□□□□□ -0.57
RDX-215ENST00000533961 HOXB3P14651 431 aaPredicted RBP11.45□□□□□ -0.58
RDX-215ENST00000533961 ZNF710Q8N1W2 664 aa11.45□□□□□ -0.58
RDX-215ENST00000533961 CABP2Q9NPB3 220 aa11.45□□□□□ -0.58
RDX-215ENST00000533961 HOXB1P14653 301 aaPredicted RBP11.43□□□□□ -0.58
RDX-215ENST00000533961 DOK7Q18PE1 504 aa11.43□□□□□ -0.58
RDX-215ENST00000533961 ERBB3P21860 1342 aa11.4□□□□□ -0.58
RDX-215ENST00000533961 CIZ1Q9ULV3 898 aaPredicted RBP11.38□□□□□ -0.59
RDX-215ENST00000533961 RIMBP2O15034 1052 aa11.37□□□□□ -0.59
RDX-215ENST00000533961 SPOCK2Q92563 424 aa11.37□□□□□ -0.59
RDX-215ENST00000533961 RNF166Q96A37 237 aaPredicted RBP11.33□□□□□ -0.6
RDX-215ENST00000533961 VARS2Q5ST30 1063 aaKnown RBP11.29□□□□□ -0.6
RDX-215ENST00000533961 ZSWIM6Q9HCJ5 1215 aa11.28□□□□□ -0.6
RDX-215ENST00000533961 IFNLR1Q8IU57 520 aaPredicted RBP11.27□□□□□ -0.61
RDX-215ENST00000533961 MYT1LQ9UL68 1186 aa11.27□□□□□ -0.61
RDX-215ENST00000533961 EFCAB3Q8N7B9 438 aa11.26□□□□□ -0.61
RDX-215ENST00000533961 ZNF687Q8N1G0 1237 aa11.25□□□□□ -0.61
RDX-215ENST00000533961 TRIM41Q8WV44 630 aa11.24□□□□□ -0.61
RDX-215ENST00000533961 MICALL2Q8IY33 904 aa11.22□□□□□ -0.61
RDX-215ENST00000533961 PTGER2P43116 358 aa11.21□□□□□ -0.61
RDX-215ENST00000533961 GPR153Q6NV75 609 aa11.19□□□□□ -0.62
RDX-215ENST00000533961 SOX12O15370 315 aa11.18□□□□□ -0.62
RDX-215ENST00000533961 TMEM92Q6UXU6 159 aa11.18□□□□□ -0.62
RDX-215ENST00000533961 ARSIQ5FYB1 569 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms