RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 CREBZFQ9NS37 354 aa11.68□□□□□ -0.54
BRCA2-205ENST00000533776 SLC39A7Q92504 469 aa11.66□□□□□ -0.54
BRCA2-205ENST00000533776 CDAN1Q8IWY9 1227 aa11.63□□□□□ -0.55
BRCA2-205ENST00000533776 ATMINO43313 823 aaPredicted RBP11.62□□□□□ -0.55
BRCA2-205ENST00000533776 SCUBE2Q9NQ36 999 aa11.6□□□□□ -0.55
BRCA2-205ENST00000533776 PAK3O75914 559 aaPredicted RBP11.59□□□□□ -0.55
BRCA2-205ENST00000533776 MS4A3Q96HJ5 214 aa11.52□□□□□ -0.57
BRCA2-205ENST00000533776 POTEFA5A3E0 1075 aa11.47□□□□□ -0.57
BRCA2-205ENST00000533776 MMRN1Q13201 1228 aa11.45□□□□□ -0.58
BRCA2-205ENST00000533776 ATN1P54259 1190 aaPredicted RBP11.43□□□□□ -0.58
BRCA2-205ENST00000533776 STAG3Q9UJ98 1225 aa11.43□□□□□ -0.58
BRCA2-205ENST00000533776 MNX1P50219 401 aaPredicted RBP11.4□□□□□ -0.58
BRCA2-205ENST00000533776 SPNS2Q8IVW8 549 aa11.39□□□□□ -0.59
BRCA2-205ENST00000533776 NPM1P06748 294 aaKnown RBP eCLIP11.38□□□□□ -0.59
BRCA2-205ENST00000533776 ST18O60284 1047 aa11.32□□□□□ -0.6
BRCA2-205ENST00000533776 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
BRCA2-205ENST00000533776 BMP2KQ9NSY1 1161 aaPredicted RBP11.28□□□□□ -0.6
BRCA2-205ENST00000533776 COLQQ9Y215 455 aaPredicted RBP11.26□□□□□ -0.61
BRCA2-205ENST00000533776 TRPC6Q9Y210 931 aa11.21□□□□□ -0.61
BRCA2-205ENST00000533776 KIF12Q96FN5 646 aa11.2□□□□□ -0.62
BRCA2-205ENST00000533776 CCDC61Q9Y6R9 512 aa11.2□□□□□ -0.62
BRCA2-205ENST00000533776 TIE1P35590 1138 aa11.18□□□□□ -0.62
BRCA2-205ENST00000533776 SLAIN1Q8ND83 568 aa11.17□□□□□ -0.62
BRCA2-205ENST00000533776 SEC24BO95487 1268 aa11.16□□□□□ -0.62
BRCA2-205ENST00000533776 TSPYL2Q9H2G4 693 aaPredicted RBP11.15□□□□□ -0.62
BRCA2-205ENST00000533776 TMEM121BQ9BXQ6 578 aaPredicted RBP11.13□□□□□ -0.63
BRCA2-205ENST00000533776 TTLL13PA6NNM8 815 aa11.09□□□□□ -0.63
BRCA2-205ENST00000533776 IER5LQ5T953 404 aa11.08□□□□□ -0.64
BRCA2-205ENST00000533776 MAP3K13O43283 966 aa11.06□□□□□ -0.64
BRCA2-205ENST00000533776 TRIM35Q9UPQ4 493 aa11.01□□□□□ -0.65
BRCA2-205ENST00000533776 PROM2Q8N271 834 aa11□□□□□ -0.65
BRCA2-205ENST00000533776 MARVELD3Q96A59 401 aa11□□□□□ -0.65
BRCA2-205ENST00000533776 KRTAP3-3Q9BYR6 98 aa10.96□□□□□ -0.65
BRCA2-205ENST00000533776 KRTAP3-2Q9BYR7 98 aa10.96□□□□□ -0.65
BRCA2-205ENST00000533776 SNPHO15079 494 aa10.95□□□□□ -0.66
BRCA2-205ENST00000533776 FKBP8Q14318 412 aa10.92□□□□□ -0.66
BRCA2-205ENST00000533776 POTEB3A0JP26 581 aa10.87□□□□□ -0.67
BRCA2-205ENST00000533776 PLCG2P16885 1265 aa10.87□□□□□ -0.67
BRCA2-205ENST00000533776 POTEBQ6S5H4 581 aa10.87□□□□□ -0.67
BRCA2-205ENST00000533776 SGIP1Q9BQI5 828 aa10.87□□□□□ -0.67
BRCA2-205ENST00000533776 IRX5P78411 483 aaPredicted RBP10.85□□□□□ -0.67
BRCA2-205ENST00000533776 RASEFQ8IZ41 740 aa10.83□□□□□ -0.68
BRCA2-205ENST00000533776 EMP3P54852 163 aa10.82□□□□□ -0.68
BRCA2-205ENST00000533776 HS3ST6Q96QI5 342 aa10.82□□□□□ -0.68
BRCA2-205ENST00000533776 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.79□□□□□ -0.68
BRCA2-205ENST00000533776 PCDHB13Q9Y5F0 798 aa10.79□□□□□ -0.68
BRCA2-205ENST00000533776 FAM205CA6NFA0 338 aa10.75□□□□□ -0.69
BRCA2-205ENST00000533776 MIER1Q8N108 512 aa10.75□□□□□ -0.69
BRCA2-205ENST00000533776 TMEM106CQ9BVX2 250 aa10.75□□□□□ -0.69
BRCA2-205ENST00000533776 OCEL1Q9H607 264 aa10.74□□□□□ -0.69
BRCA2-205ENST00000533776 PLEKHG5O94827 1062 aa10.73□□□□□ -0.69
BRCA2-205ENST00000533776 IFNL1Q8IU54 200 aa10.73□□□□□ -0.69
BRCA2-205ENST00000533776 PLCD3Q8N3E9 789 aa10.71□□□□□ -0.69
BRCA2-205ENST00000533776 RNF166Q96A37 237 aaPredicted RBP10.67□□□□□ -0.7
BRCA2-205ENST00000533776 FBXO3Q9UK99 471 aa10.6□□□□□ -0.71
BRCA2-205ENST00000533776 ZBTB47Q9UFB7 747 aaPredicted RBP10.57□□□□□ -0.72
BRCA2-205ENST00000533776 C3orf67Q6ZVT6 689 aa10.54□□□□□ -0.72
BRCA2-205ENST00000533776 PDCD7Q8N8D1 485 aaKnown RBP10.54□□□□□ -0.72
BRCA2-205ENST00000533776 MYT1LQ9UL68 1186 aa10.54□□□□□ -0.72
BRCA2-205ENST00000533776 NUBP1P53384 320 aa10.52□□□□□ -0.73
BRCA2-205ENST00000533776 VASPP50552 380 aaPredicted RBP10.49□□□□□ -0.73
BRCA2-205ENST00000533776 L3MBTL3Q96JM7 780 aaPredicted RBP10.49□□□□□ -0.73
BRCA2-205ENST00000533776 HOXB3P14651 431 aaPredicted RBP10.46□□□□□ -0.73
BRCA2-205ENST00000533776 HOXB1P14653 301 aaPredicted RBP10.46□□□□□ -0.73
BRCA2-205ENST00000533776 FAM212AQ96EL1 285 aa10.45□□□□□ -0.74
BRCA2-205ENST00000533776 KLHL34Q8N239 644 aa10.43□□□□□ -0.74
BRCA2-205ENST00000533776 ERBB3P21860 1342 aa10.42□□□□□ -0.74
BRCA2-205ENST00000533776 DCAF8Q5TAQ9 597 aa10.4□□□□□ -0.74
BRCA2-205ENST00000533776 PTGER2P43116 358 aa10.36□□□□□ -0.75
BRCA2-205ENST00000533776 PCDHB8Q9UN66 801 aa10.35□□□□□ -0.75
BRCA2-205ENST00000533776 PYGBP11216 843 aa10.33□□□□□ -0.76
BRCA2-205ENST00000533776 VARS2Q5ST30 1063 aaKnown RBP10.33□□□□□ -0.76
BRCA2-205ENST00000533776 ZNF710Q8N1W2 664 aa10.33□□□□□ -0.76
BRCA2-205ENST00000533776 MKRN3Q13064 507 aaKnown RBP10.31□□□□□ -0.76
BRCA2-205ENST00000533776 IFNLR1Q8IU57 520 aaPredicted RBP10.31□□□□□ -0.76
BRCA2-205ENST00000533776 ZNF687Q8N1G0 1237 aa10.31□□□□□ -0.76
BRCA2-205ENST00000533776 ILDR1Q86SU0 546 aaPredicted RBP10.3□□□□□ -0.76
BRCA2-205ENST00000533776 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.3□□□□□ -0.76
BRCA2-205ENST00000533776 GSE1Q14687 1217 aa10.28□□□□□ -0.76
BRCA2-205ENST00000533776 DOK7Q18PE1 504 aa10.27□□□□□ -0.77
BRCA2-205ENST00000533776 SPOCK2Q92563 424 aa10.26□□□□□ -0.77
BRCA2-205ENST00000533776 PLA2G2EQ9NZK7 142 aa10.26□□□□□ -0.77
BRCA2-205ENST00000533776 GOLGA2Q08379 1002 aa10.24□□□□□ -0.77
BRCA2-205ENST00000533776 DPY19L2Q6NUT2 758 aa10.23□□□□□ -0.77
BRCA2-205ENST00000533776 CIZ1Q9ULV3 898 aaPredicted RBP10.21□□□□□ -0.77
BRCA2-205ENST00000533776 BOLA1Q9Y3E2 137 aa10.19□□□□□ -0.78
BRCA2-205ENST00000533776 RIMBP2O15034 1052 aa10.18□□□□□ -0.78
BRCA2-205ENST00000533776 ANKRD13DQ6ZTN6 518 aa10.17□□□□□ -0.78
BRCA2-205ENST00000533776 ZNF467Q7Z7K2 595 aaPredicted RBP10.15□□□□□ -0.78
BRCA2-205ENST00000533776 ZSWIM6Q9HCJ5 1215 aa10.15□□□□□ -0.78
BRCA2-205ENST00000533776 CHRM1P11229 460 aaPredicted RBP10.14□□□□□ -0.79
BRCA2-205ENST00000533776 GPR153Q6NV75 609 aa10.12□□□□□ -0.79
BRCA2-205ENST00000533776 G3V3G9 751 aa10.1□□□□□ -0.79
BRCA2-205ENST00000533776 LSM11P83369 360 aaKnown RBP eCLIP10.09□□□□□ -0.79
BRCA2-205ENST00000533776 HCSTQ9UBK5 93 aa10.09□□□□□ -0.79
BRCA2-205ENST00000533776 PSEN1P49768 467 aa10.08□□□□□ -0.8
BRCA2-205ENST00000533776 PDAP1Q13442 181 aaKnown RBP10.03□□□□□ -0.8
BRCA2-205ENST00000533776 TRIM41Q8WV44 630 aa10.02□□□□□ -0.81
BRCA2-205ENST00000533776 TMEM92Q6UXU6 159 aa9.99□□□□□ -0.81
BRCA2-205ENST00000533776 ZNF316A6NFI3 1004 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms