RNA–Protein interactions for RNA: ENST00000533641.5

CAPRIN1-214, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-214ENST00000533641 SLC39A7Q92504 469 aa11.22□□□□□ -0.61
CAPRIN1-214ENST00000533641 ATMINO43313 823 aaPredicted RBP11.2□□□□□ -0.62
CAPRIN1-214ENST00000533641 C7P10643 843 aa11.2□□□□□ -0.62
CAPRIN1-214ENST00000533641 MAMSTRQ6ZN01 415 aa11.16□□□□□ -0.62
CAPRIN1-214ENST00000533641 PCDH10Q9P2E7 1040 aa11.14□□□□□ -0.63
CAPRIN1-214ENST00000533641 POTEJP0CG39 1038 aa11.13□□□□□ -0.63
CAPRIN1-214ENST00000533641 TSPYL2Q9H2G4 693 aaPredicted RBP11.12□□□□□ -0.63
CAPRIN1-214ENST00000533641 ATN1P54259 1190 aaPredicted RBP11.08□□□□□ -0.64
CAPRIN1-214ENST00000533641 EHMT2Q96KQ7 1210 aa11.08□□□□□ -0.64
CAPRIN1-214ENST00000533641 CCDC61Q9Y6R9 512 aa11.08□□□□□ -0.64
CAPRIN1-214ENST00000533641 SCUBE2Q9NQ36 999 aa11.07□□□□□ -0.64
CAPRIN1-214ENST00000533641 KIF12Q96FN5 646 aa11.04□□□□□ -0.64
CAPRIN1-214ENST00000533641 LCE2DQ5TA82 110 aaPredicted RBP11.02□□□□□ -0.65
CAPRIN1-214ENST00000533641 PROM2Q8N271 834 aa11.02□□□□□ -0.65
CAPRIN1-214ENST00000533641 FAM163AQ96GL9 167 aaPredicted RBP11.02□□□□□ -0.65
CAPRIN1-214ENST00000533641 BMP2KQ9NSY1 1161 aaPredicted RBP11□□□□□ -0.65
CAPRIN1-214ENST00000533641 POTEFA5A3E0 1075 aa10.98□□□□□ -0.65
CAPRIN1-214ENST00000533641 TIE1P35590 1138 aa10.97□□□□□ -0.65
CAPRIN1-214ENST00000533641 TRPC6Q9Y210 931 aa10.96□□□□□ -0.65
CAPRIN1-214ENST00000533641 MAP3K13O43283 966 aa10.95□□□□□ -0.66
CAPRIN1-214ENST00000533641 PLEKHG5O94827 1062 aa10.95□□□□□ -0.66
CAPRIN1-214ENST00000533641 SEC24BO95487 1268 aa10.9□□□□□ -0.66
CAPRIN1-214ENST00000533641 RASEFQ8IZ41 740 aa10.9□□□□□ -0.66
CAPRIN1-214ENST00000533641 MIER1Q8N108 512 aa10.9□□□□□ -0.66
CAPRIN1-214ENST00000533641 TTLL13PA6NNM8 815 aa10.88□□□□□ -0.67
CAPRIN1-214ENST00000533641 COLQQ9Y215 455 aaPredicted RBP10.87□□□□□ -0.67
CAPRIN1-214ENST00000533641 SGIP1Q9BQI5 828 aa10.84□□□□□ -0.67
CAPRIN1-214ENST00000533641 IER5LQ5T953 404 aa10.83□□□□□ -0.68
CAPRIN1-214ENST00000533641 TRIM35Q9UPQ4 493 aa10.82□□□□□ -0.68
CAPRIN1-214ENST00000533641 CDAN1Q8IWY9 1227 aa10.8□□□□□ -0.68
CAPRIN1-214ENST00000533641 PCDHB13Q9Y5F0 798 aa10.8□□□□□ -0.68
CAPRIN1-214ENST00000533641 PLCD3Q8N3E9 789 aa10.77□□□□□ -0.69
CAPRIN1-214ENST00000533641 SLAIN1Q8ND83 568 aa10.75□□□□□ -0.69
CAPRIN1-214ENST00000533641 ZBTB47Q9UFB7 747 aaPredicted RBP10.74□□□□□ -0.69
CAPRIN1-214ENST00000533641 IFNL1Q8IU54 200 aa10.72□□□□□ -0.69
CAPRIN1-214ENST00000533641 ST18O60284 1047 aa10.71□□□□□ -0.69
CAPRIN1-214ENST00000533641 NUBP1P53384 320 aa10.71□□□□□ -0.69
CAPRIN1-214ENST00000533641 PLCG2P16885 1265 aa10.7□□□□□ -0.7
CAPRIN1-214ENST00000533641 TMEM106CQ9BVX2 250 aa10.7□□□□□ -0.7
CAPRIN1-214ENST00000533641 FAM212AQ96EL1 285 aa10.67□□□□□ -0.7
CAPRIN1-214ENST00000533641 IRX5P78411 483 aaPredicted RBP10.64□□□□□ -0.71
CAPRIN1-214ENST00000533641 TMEM121BQ9BXQ6 578 aaPredicted RBP10.6□□□□□ -0.71
CAPRIN1-214ENST00000533641 OCEL1Q9H607 264 aa10.59□□□□□ -0.71
CAPRIN1-214ENST00000533641 SNPHO15079 494 aa10.58□□□□□ -0.72
CAPRIN1-214ENST00000533641 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.56□□□□□ -0.72
CAPRIN1-214ENST00000533641 MMRN1Q13201 1228 aa10.55□□□□□ -0.72
CAPRIN1-214ENST00000533641 SPNS2Q8IVW8 549 aa10.54□□□□□ -0.72
CAPRIN1-214ENST00000533641 DCAF8Q5TAQ9 597 aa10.53□□□□□ -0.72
CAPRIN1-214ENST00000533641 PYGBP11216 843 aa10.51□□□□□ -0.73
CAPRIN1-214ENST00000533641 MARVELD3Q96A59 401 aa10.49□□□□□ -0.73
CAPRIN1-214ENST00000533641 PCDHB8Q9UN66 801 aa10.48□□□□□ -0.73
CAPRIN1-214ENST00000533641 C3orf67Q6ZVT6 689 aa10.43□□□□□ -0.74
CAPRIN1-214ENST00000533641 PDCD7Q8N8D1 485 aaKnown RBP10.42□□□□□ -0.74
CAPRIN1-214ENST00000533641 FKBP8Q14318 412 aa10.41□□□□□ -0.74
CAPRIN1-214ENST00000533641 L3MBTL3Q96JM7 780 aaPredicted RBP10.41□□□□□ -0.74
CAPRIN1-214ENST00000533641 EMP3P54852 163 aa10.4□□□□□ -0.74
CAPRIN1-214ENST00000533641 GOLGA2Q08379 1002 aa10.4□□□□□ -0.74
CAPRIN1-214ENST00000533641 MKRN3Q13064 507 aaKnown RBP10.39□□□□□ -0.75
CAPRIN1-214ENST00000533641 ZNF467Q7Z7K2 595 aaPredicted RBP10.38□□□□□ -0.75
CAPRIN1-214ENST00000533641 GSE1Q14687 1217 aa10.35□□□□□ -0.75
CAPRIN1-214ENST00000533641 HS3ST6Q96QI5 342 aa10.34□□□□□ -0.75
CAPRIN1-214ENST00000533641 FBXO3Q9UK99 471 aa10.34□□□□□ -0.75
CAPRIN1-214ENST00000533641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.33□□□□□ -0.769e-8■■■□□ 15.6
CAPRIN1-214ENST00000533641 KRTAP3-3Q9BYR6 98 aa10.32□□□□□ -0.76
CAPRIN1-214ENST00000533641 KRTAP3-2Q9BYR7 98 aa10.32□□□□□ -0.76
CAPRIN1-214ENST00000533641 FAM205CA6NFA0 338 aa10.31□□□□□ -0.76
CAPRIN1-214ENST00000533641 POTEB3A0JP26 581 aa10.3□□□□□ -0.76
CAPRIN1-214ENST00000533641 POTEBQ6S5H4 581 aa10.3□□□□□ -0.76
CAPRIN1-214ENST00000533641 CHRM1P11229 460 aaPredicted RBP10.29□□□□□ -0.76
CAPRIN1-214ENST00000533641 PSEN1P49768 467 aa10.29□□□□□ -0.76
CAPRIN1-214ENST00000533641 KLHL34Q8N239 644 aa10.28□□□□□ -0.76
CAPRIN1-214ENST00000533641 ILDR1Q86SU0 546 aaPredicted RBP10.25□□□□□ -0.77
CAPRIN1-214ENST00000533641 G3V3G9 751 aa10.22□□□□□ -0.77
CAPRIN1-214ENST00000533641 PDAP1Q13442 181 aaKnown RBP10.21□□□□□ -0.77
CAPRIN1-214ENST00000533641 DPY19L2Q6NUT2 758 aa10.21□□□□□ -0.77
CAPRIN1-214ENST00000533641 VASPP50552 380 aaPredicted RBP10.2□□□□□ -0.78
CAPRIN1-214ENST00000533641 BOLA1Q9Y3E2 137 aa10.19□□□□□ -0.78
CAPRIN1-214ENST00000533641 HOXB3P14651 431 aaPredicted RBP10.18□□□□□ -0.78
CAPRIN1-214ENST00000533641 HOXB1P14653 301 aaPredicted RBP10.17□□□□□ -0.78
CAPRIN1-214ENST00000533641 CABP2Q9NPB3 220 aa10.17□□□□□ -0.78
CAPRIN1-214ENST00000533641 ZNF710Q8N1W2 664 aa10.16□□□□□ -0.78
CAPRIN1-214ENST00000533641 DOK7Q18PE1 504 aa10.14□□□□□ -0.79
CAPRIN1-214ENST00000533641 ERBB3P21860 1342 aa10.13□□□□□ -0.79
CAPRIN1-214ENST00000533641 RNF166Q96A37 237 aaPredicted RBP10.09□□□□□ -0.79
CAPRIN1-214ENST00000533641 RIMBP2O15034 1052 aa10.08□□□□□ -0.8
CAPRIN1-214ENST00000533641 CIZ1Q9ULV3 898 aaPredicted RBP10.07□□□□□ -0.8
CAPRIN1-214ENST00000533641 SPOCK2Q92563 424 aa10.05□□□□□ -0.8
CAPRIN1-214ENST00000533641 VARS2Q5ST30 1063 aaKnown RBP10.04□□□□□ -0.8
CAPRIN1-214ENST00000533641 MYT1LQ9UL68 1186 aa10.03□□□□□ -0.8
CAPRIN1-214ENST00000533641 ZSWIM6Q9HCJ5 1215 aa10.01□□□□□ -0.81
CAPRIN1-214ENST00000533641 ZNF687Q8N1G0 1237 aa9.99□□□□□ -0.81
CAPRIN1-214ENST00000533641 EFCAB3Q8N7B9 438 aa9.99□□□□□ -0.81
CAPRIN1-214ENST00000533641 IFNLR1Q8IU57 520 aaPredicted RBP9.98□□□□□ -0.81
CAPRIN1-214ENST00000533641 PTGER2P43116 358 aa9.96□□□□□ -0.82
CAPRIN1-214ENST00000533641 MICALL2Q8IY33 904 aa9.96□□□□□ -0.82
CAPRIN1-214ENST00000533641 TMEM92Q6UXU6 159 aa9.95□□□□□ -0.82
CAPRIN1-214ENST00000533641 GPR153Q6NV75 609 aa9.94□□□□□ -0.82
CAPRIN1-214ENST00000533641 TRIM41Q8WV44 630 aa9.93□□□□□ -0.82
CAPRIN1-214ENST00000533641 SOX12O15370 315 aa9.89□□□□□ -0.83
CAPRIN1-214ENST00000533641 ANKRD13DQ6ZTN6 518 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms