RNA–Protein interactions for RNA: ENST00000533252.1

CASP4-211, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 215 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-211ENST00000533252 FAM212AQ96EL1 285 aa11.3□□□□□ -0.6
CASP4-211ENST00000533252 CFAP44Q96MT7 982 aa11.3□□□□□ -0.6
CASP4-211ENST00000533252 TRIM41Q8WV44 630 aa11.28□□□□□ -0.6
CASP4-211ENST00000533252 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.27□□□□□ -0.61
CASP4-211ENST00000533252 PYGBP11216 843 aa11.25□□□□□ -0.61
CASP4-211ENST00000533252 PRKAR2AP13861 404 aaKnown RBP11.24□□□□□ -0.61
CASP4-211ENST00000533252 TSPYL2Q9H2G4 693 aaPredicted RBP11.24□□□□□ -0.61
CASP4-211ENST00000533252 FARP1Q9Y4F1 1045 aaPredicted RBP11.22□□□□□ -0.61
CASP4-211ENST00000533252 RIOK3O14730 519 aaKnown RBP11.2□□□□□ -0.62
CASP4-211ENST00000533252 FXR2P51116 673 aaKnown RBP eCLIP11.17□□□□□ -0.62
CASP4-211ENST00000533252 SPRYD3Q8NCJ5 442 aa11.17□□□□□ -0.62
CASP4-211ENST00000533252 HS6ST3Q8IZP7 471 aa11.16□□□□□ -0.62
CASP4-211ENST00000533252 CHRDL2Q6WN34 429 aa11.15□□□□□ -0.62
CASP4-211ENST00000533252 CHRM1P11229 460 aaPredicted RBP11.14□□□□□ -0.63
CASP4-211ENST00000533252 TSHZ2Q9NRE2 1034 aa11.14□□□□□ -0.63
CASP4-211ENST00000533252 PIP4P2Q8N4L2 257 aa11.13□□□□□ -0.63
CASP4-211ENST00000533252 STK25O00506 426 aa11.12□□□□□ -0.63
CASP4-211ENST00000533252 NKX1-1Q15270 411 aaPredicted RBP11.11□□□□□ -0.63
CASP4-211ENST00000533252 KDM2AQ9Y2K7 1162 aa11.11□□□□□ -0.63
CASP4-211ENST00000533252 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.1□□□□□ -0.63
CASP4-211ENST00000533252 ZFP91Q96JP5 570 aaPredicted RBP11.1□□□□□ -0.63
CASP4-211ENST00000533252 VGFO15240 615 aaPredicted RBP11.09□□□□□ -0.63
CASP4-211ENST00000533252 STK24Q9Y6E0 443 aa11.08□□□□□ -0.64
CASP4-211ENST00000533252 VSIG10Q8N0Z9 540 aa11.07□□□□□ -0.64
CASP4-211ENST00000533252 PCDHB8Q9UN66 801 aa11.07□□□□□ -0.64
CASP4-211ENST00000533252 PCDHB13Q9Y5F0 798 aa11.07□□□□□ -0.64
CASP4-211ENST00000533252 BCL11BQ9C0K0 894 aaPredicted RBP11.06□□□□□ -0.64
CASP4-211ENST00000533252 TAOK2Q9UL54 1235 aa11.05□□□□□ -0.64
CASP4-211ENST00000533252 CCDC61Q9Y6R9 512 aa11.04□□□□□ -0.64
CASP4-211ENST00000533252 GTPBP6O43824 516 aaPredicted RBP11□□□□□ -0.65
CASP4-211ENST00000533252 DNAJC5Q9H3Z4 198 aa10.99□□□□□ -0.65
CASP4-211ENST00000533252 SGIP1Q9BQI5 828 aa10.98□□□□□ -0.65
CASP4-211ENST00000533252 PAK3O75914 559 aaPredicted RBP10.96□□□□□ -0.65
CASP4-211ENST00000533252 MAP3K13O43283 966 aa10.95□□□□□ -0.66
CASP4-211ENST00000533252 ZNF467Q7Z7K2 595 aaPredicted RBP10.95□□□□□ -0.66
CASP4-211ENST00000533252 ZRANB1Q9UGI0 708 aa10.95□□□□□ -0.66
CASP4-211ENST00000533252 IFNL1Q8IU54 200 aa10.94□□□□□ -0.66
CASP4-211ENST00000533252 CD44P16070 742 aaKnown RBP10.93□□□□□ -0.66
CASP4-211ENST00000533252 PDAP1Q13442 181 aaKnown RBP10.93□□□□□ -0.66
CASP4-211ENST00000533252 PHF12Q96QT6 1004 aa10.93□□□□□ -0.66
CASP4-211ENST00000533252 PSEN1P49768 467 aa10.92□□□□□ -0.66
CASP4-211ENST00000533252 KIF12Q96FN5 646 aa10.92□□□□□ -0.66
CASP4-211ENST00000533252 ZNF579Q8NAF0 562 aaKnown RBP10.9□□□□□ -0.66
CASP4-211ENST00000533252 NISCHQ9Y2I1 1504 aa10.85□□□□□ -0.67
CASP4-211ENST00000533252 BCANQ96GW7 911 aa10.85□□□□□ -0.67
CASP4-211ENST00000533252 CABP2Q9NPB3 220 aa10.82□□□□□ -0.68
CASP4-211ENST00000533252 EFCAB3Q8N7B9 438 aa10.81□□□□□ -0.68
CASP4-211ENST00000533252 TRPC6Q9Y210 931 aa10.81□□□□□ -0.68
CASP4-211ENST00000533252 MFRPQ9BY79 579 aa10.8□□□□□ -0.68
CASP4-211ENST00000533252 C19orf67A6NJJ6 358 aa10.78□□□□□ -0.68
CASP4-211ENST00000533252 PRKCSHP14314 528 aaPredicted RBP10.78□□□□□ -0.68
CASP4-211ENST00000533252 CADPS2Q86UW7 1296 aa10.77□□□□□ -0.69
CASP4-211ENST00000533252 MS4A3Q96HJ5 214 aa10.77□□□□□ -0.69
CASP4-211ENST00000533252 PPP1R37O75864 691 aa10.76□□□□□ -0.69
CASP4-211ENST00000533252 PHF8Q9UPP1 1060 aa10.76□□□□□ -0.69
CASP4-211ENST00000533252 RYDENQ9NUL5 291 aaKnown RBP10.75□□□□□ -0.69
CASP4-211ENST00000533252 EVX2Q03828 476 aa10.72□□□□□ -0.69
CASP4-211ENST00000533252 TMEM106CQ9BVX2 250 aa10.72□□□□□ -0.69
CASP4-211ENST00000533252 FBXO22Q8NEZ5 403 aa10.7□□□□□ -0.7
CASP4-211ENST00000533252 HAX1O00165 279 aa10.69□□□□□ -0.7
CASP4-211ENST00000533252 NLRP6P59044 892 aa10.67□□□□□ -0.7
CASP4-211ENST00000533252 SOX12O15370 315 aa10.66□□□□□ -0.7
CASP4-211ENST00000533252 GALR2O43603 387 aaPredicted RBP10.64□□□□□ -0.71
CASP4-211ENST00000533252 NBR1Q14596 966 aa10.64□□□□□ -0.71
CASP4-211ENST00000533252 MS4A4AQ96JQ5 239 aa10.64□□□□□ -0.71
CASP4-211ENST00000533252 GOLGA2Q08379 1002 aa10.63□□□□□ -0.71
CASP4-211ENST00000533252 TPRNQ4KMQ1 711 aa10.63□□□□□ -0.71
CASP4-211ENST00000533252 TTLL13PA6NNM8 815 aa10.6□□□□□ -0.71
CASP4-211ENST00000533252 BMP2KQ9NSY1 1161 aaPredicted RBP10.6□□□□□ -0.71
CASP4-211ENST00000533252 MKRN3Q13064 507 aaKnown RBP10.59□□□□□ -0.71
CASP4-211ENST00000533252 WDR70Q9NW82 654 aa10.59□□□□□ -0.71
CASP4-211ENST00000533252 TIE1P35590 1138 aa10.56□□□□□ -0.72
CASP4-211ENST00000533252 TRIM35Q9UPQ4 493 aa10.55□□□□□ -0.72
CASP4-211ENST00000533252 KCNV2Q8TDN2 545 aa10.54□□□□□ -0.72
CASP4-211ENST00000533252 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.53□□□□□ -0.72
CASP4-211ENST00000533252 DPY19L2Q6NUT2 758 aa10.52□□□□□ -0.73
CASP4-211ENST00000533252 NCKAP5LQ9HCH0 1330 aa10.51□□□□□ -0.73
CASP4-211ENST00000533252 ATN1P54259 1190 aaPredicted RBP10.5□□□□□ -0.73
CASP4-211ENST00000533252 LARP6Q9BRS8 491 aaKnown RBP10.49□□□□□ -0.73
CASP4-211ENST00000533252 ATMINO43313 823 aaPredicted RBP10.45□□□□□ -0.74
CASP4-211ENST00000533252 P3H3Q8IVL6 736 aa10.45□□□□□ -0.74
CASP4-211ENST00000533252 GABBR2O75899 941 aa10.44□□□□□ -0.74
CASP4-211ENST00000533252 PDE4AP27815 886 aa10.43□□□□□ -0.74
CASP4-211ENST00000533252 E2F4Q16254 413 aa10.43□□□□□ -0.74
CASP4-211ENST00000533252 ILDR1Q86SU0 546 aaPredicted RBP10.41□□□□□ -0.74
CASP4-211ENST00000533252 CRISPLD2Q9H0B8 497 aa10.41□□□□□ -0.74
CASP4-211ENST00000533252 PELP1Q8IZL8 1130 aaKnown RBP10.39□□□□□ -0.75
CASP4-211ENST00000533252 PDCD7Q8N8D1 485 aaKnown RBP10.39□□□□□ -0.75
CASP4-211ENST00000533252 ASTLQ6HA08 431 aaPredicted RBP10.38□□□□□ -0.75
CASP4-211ENST00000533252 POTEHQ6S545 545 aa10.38□□□□□ -0.75
CASP4-211ENST00000533252 IRX5P78411 483 aaPredicted RBP10.37□□□□□ -0.75
CASP4-211ENST00000533252 DDX27Q96GQ7 796 aaKnown RBP10.37□□□□□ -0.75
CASP4-211ENST00000533252 MFSD10Q14728 455 aa10.36□□□□□ -0.75
CASP4-211ENST00000533252 MICALL2Q8IY33 904 aa10.36□□□□□ -0.75
CASP4-211ENST00000533252 SEMA3EO15041 775 aa10.35□□□□□ -0.75
CASP4-211ENST00000533252 CLCN6P51797 869 aa10.35□□□□□ -0.75
CASP4-211ENST00000533252 ARHGEF1Q92888 912 aaKnown RBP10.35□□□□□ -0.75
CASP4-211ENST00000533252 OCEL1Q9H607 264 aa10.34□□□□□ -0.75
CASP4-211ENST00000533252 DCBLD2Q96PD2 775 aa10.33□□□□□ -0.76
CASP4-211ENST00000533252 COLQQ9Y215 455 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms