RNA–Protein interactions for RNA: ENST00000533179.1

SOX9-AS1-211, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 460 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-211ENST00000533179 HS6ST3Q8IZP7 471 aa11.01□□□□□ -0.65
SOX9-AS1-211ENST00000533179 HMGB1P09429 215 aaKnown RBP11□□□□□ -0.65
SOX9-AS1-211ENST00000533179 UBE2Q2Q8WVN8 375 aa11□□□□□ -0.65
SOX9-AS1-211ENST00000533179 C1QBPQ07021 282 aaKnown RBP10.98□□□□□ -0.65
SOX9-AS1-211ENST00000533179 CDK11BP21127 795 aaKnown RBP10.97□□□□□ -0.65
SOX9-AS1-211ENST00000533179 STAG3Q9UJ98 1225 aa10.96□□□□□ -0.65
SOX9-AS1-211ENST00000533179 UBTFP17480 764 aaKnown RBP10.95□□□□□ -0.66
SOX9-AS1-211ENST00000533179 PLCD3Q8N3E9 789 aa10.95□□□□□ -0.66
SOX9-AS1-211ENST00000533179 SHROOM4Q9ULL8 1493 aa10.94□□□□□ -0.66
SOX9-AS1-211ENST00000533179 CIZ1Q9ULV3 898 aaPredicted RBP10.94□□□□□ -0.66
SOX9-AS1-211ENST00000533179 FAM9AQ8IZU1 332 aaPredicted RBP10.91□□□□□ -0.66
SOX9-AS1-211ENST00000533179 CHMP4AQ9BY43 222 aa10.9□□□□□ -0.66
SOX9-AS1-211ENST00000533179 BRPF1P55201 1214 aaPredicted RBP10.89□□□□□ -0.67
SOX9-AS1-211ENST00000533179 GTPBP6O43824 516 aaPredicted RBP10.88□□□□□ -0.67
SOX9-AS1-211ENST00000533179 BRD2P25440 801 aaKnown RBP10.88□□□□□ -0.67
SOX9-AS1-211ENST00000533179 NKX1-1Q15270 411 aaPredicted RBP10.88□□□□□ -0.67
SOX9-AS1-211ENST00000533179 TRIM41Q8WV44 630 aa10.88□□□□□ -0.67
SOX9-AS1-211ENST00000533179 HSP90B1P14625 803 aaKnown RBP10.85□□□□□ -0.67
SOX9-AS1-211ENST00000533179 MIER1Q8N108 512 aa10.85□□□□□ -0.67
SOX9-AS1-211ENST00000533179 NEFLP07196 543 aa10.84□□□□□ -0.67
SOX9-AS1-211ENST00000533179 PDE4CQ08493 712 aa10.82□□□□□ -0.68
SOX9-AS1-211ENST00000533179 POLA2Q14181 598 aa10.82□□□□□ -0.68
SOX9-AS1-211ENST00000533179 TAF7LQ5H9L4 462 aa10.82□□□□□ -0.68
SOX9-AS1-211ENST00000533179 LMOD2Q6P5Q4 547 aa10.82□□□□□ -0.68
SOX9-AS1-211ENST00000533179 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.82□□□□□ -0.68
SOX9-AS1-211ENST00000533179 P3H3Q8IVL6 736 aa10.79□□□□□ -0.68
SOX9-AS1-211ENST00000533179 CCDC9Q9Y3X0 531 aaKnown RBP10.79□□□□□ -0.68
SOX9-AS1-211ENST00000533179 RNF25Q96BH1 459 aaPredicted RBP10.78□□□□□ -0.68
SOX9-AS1-211ENST00000533179 NEUROD2Q15784 382 aa10.73□□□□□ -0.69
SOX9-AS1-211ENST00000533179 ZBTB47Q9UFB7 747 aaPredicted RBP10.73□□□□□ -0.69
SOX9-AS1-211ENST00000533179 TRHP20396 242 aaPredicted RBP10.71□□□□□ -0.69
SOX9-AS1-211ENST00000533179 PUS7Q96PZ0 661 aaKnown RBP10.69□□□□□ -0.7
SOX9-AS1-211ENST00000533179 ZBTB12Q9Y330 459 aaPredicted RBP10.69□□□□□ -0.7
SOX9-AS1-211ENST00000533179 RIOK3O14730 519 aaKnown RBP10.66□□□□□ -0.7
SOX9-AS1-211ENST00000533179 ZNF692Q9BU19 519 aaPredicted RBP10.66□□□□□ -0.7
SOX9-AS1-211ENST00000533179 IGSF3O75054 1194 aa10.65□□□□□ -0.7
SOX9-AS1-211ENST00000533179 KCNV2Q8TDN2 545 aa10.64□□□□□ -0.71
SOX9-AS1-211ENST00000533179 ZC3H15Q8WU90 426 aaKnown RBP10.64□□□□□ -0.71
SOX9-AS1-211ENST00000533179 PKNOX2Q96KN3 472 aa10.64□□□□□ -0.71
SOX9-AS1-211ENST00000533179 STK25O00506 426 aa10.63□□□□□ -0.71
SOX9-AS1-211ENST00000533179 GSE1Q14687 1217 aa10.63□□□□□ -0.71
SOX9-AS1-211ENST00000533179 RYDENQ9NUL5 291 aaKnown RBP10.63□□□□□ -0.71
SOX9-AS1-211ENST00000533179 ZMYND15Q9H091 742 aa10.62□□□□□ -0.71
SOX9-AS1-211ENST00000533179 DHX37Q8IY37 1157 aaKnown RBP10.61□□□□□ -0.71
SOX9-AS1-211ENST00000533179 SPINK5Q9NQ38 1064 aaPredicted RBP10.61□□□□□ -0.71
SOX9-AS1-211ENST00000533179 SLC24A3Q9HC58 644 aa10.6□□□□□ -0.71
SOX9-AS1-211ENST00000533179 ZBTB7CA1YPR0 619 aa10.59□□□□□ -0.71
SOX9-AS1-211ENST00000533179 RSPH6AQ9H0K4 717 aa10.59□□□□□ -0.71
SOX9-AS1-211ENST00000533179 WDR70Q9NW82 654 aa10.58□□□□□ -0.72
SOX9-AS1-211ENST00000533179 VGFO15240 615 aaPredicted RBP10.57□□□□□ -0.72
SOX9-AS1-211ENST00000533179 POTEHQ6S545 545 aa10.57□□□□□ -0.72
SOX9-AS1-211ENST00000533179 SSUH2Q9Y2M2 353 aa10.57□□□□□ -0.72
SOX9-AS1-211ENST00000533179 PABPN1Q86U42 306 aaKnown RBP eCLIP10.56□□□□□ -0.72
SOX9-AS1-211ENST00000533179 BCCIPQ9P287 314 aaKnown RBP eCLIP10.56□□□□□ -0.72
SOX9-AS1-211ENST00000533179 ZNF326Q5BKZ1 582 aaKnown RBP10.52□□□□□ -0.73
SOX9-AS1-211ENST00000533179 SPDYE2BA6NHP3 402 aa10.51□□□□□ -0.73
SOX9-AS1-211ENST00000533179 SPDYE6P0CI01 402 aa10.51□□□□□ -0.73
SOX9-AS1-211ENST00000533179 SPDYE2Q495Y8 402 aa10.51□□□□□ -0.73
SOX9-AS1-211ENST00000533179 SGIP1Q9BQI5 828 aa10.5□□□□□ -0.73
SOX9-AS1-211ENST00000533179 STK24Q9Y6E0 443 aa10.49□□□□□ -0.73
SOX9-AS1-211ENST00000533179 CAPN15O75808 1086 aa10.48□□□□□ -0.73
SOX9-AS1-211ENST00000533179 CADPS2Q86UW7 1296 aa10.48□□□□□ -0.73
SOX9-AS1-211ENST00000533179 BCL11BQ9C0K0 894 aaPredicted RBP10.48□□□□□ -0.73
SOX9-AS1-211ENST00000533179 NUBP1P53384 320 aa10.47□□□□□ -0.73
SOX9-AS1-211ENST00000533179 FGD1P98174 961 aa10.47□□□□□ -0.73
SOX9-AS1-211ENST00000533179 POLR3GLQ9BT43 218 aa10.47□□□□□ -0.73
SOX9-AS1-211ENST00000533179 DCAF8Q5TAQ9 597 aa10.46□□□□□ -0.73
SOX9-AS1-211ENST00000533179 ARID3AQ99856 593 aa10.46□□□□□ -0.73
SOX9-AS1-211ENST00000533179 ZMYND10O75800 440 aa10.45□□□□□ -0.74
SOX9-AS1-211ENST00000533179 RSPH4AQ5TD94 716 aa10.45□□□□□ -0.74
SOX9-AS1-211ENST00000533179 ARHGEF1Q92888 912 aaKnown RBP10.44□□□□□ -0.74
SOX9-AS1-211ENST00000533179 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.43□□□□□ -0.74
SOX9-AS1-211ENST00000533179 ZFP91Q96JP5 570 aaPredicted RBP10.43□□□□□ -0.74
SOX9-AS1-211ENST00000533179 TESPA1A2RU30 521 aaPredicted RBP10.42□□□□□ -0.74
SOX9-AS1-211ENST00000533179 C1orf115Q9H7X2 142 aa10.41□□□□□ -0.74
SOX9-AS1-211ENST00000533179 CENPBP07199 599 aaPredicted RBP10.4□□□□□ -0.74
SOX9-AS1-211ENST00000533179 CHRM1P11229 460 aaPredicted RBP10.4□□□□□ -0.74
SOX9-AS1-211ENST00000533179 ABCB7O75027 752 aa10.39□□□□□ -0.75
SOX9-AS1-211ENST00000533179 OSCARQ8IYS5 282 aa10.39□□□□□ -0.75
SOX9-AS1-211ENST00000533179 SEMA3EO15041 775 aa10.38□□□□□ -0.75
SOX9-AS1-211ENST00000533179 BARGINQ6ZT62 677 aa10.35□□□□□ -0.75
SOX9-AS1-211ENST00000533179 IL27Q8NEV9 243 aa10.35□□□□□ -0.75
SOX9-AS1-211ENST00000533179 GPBP1L1Q9HC44 474 aaPredicted RBP10.34□□□□□ -0.75
SOX9-AS1-211ENST00000533179 NECTIN2Q92692 538 aa10.33□□□□□ -0.76
SOX9-AS1-211ENST00000533179 TICAM2Q86XR7 235 aa10.32□□□□□ -0.76
SOX9-AS1-211ENST00000533179 FAM212AQ96EL1 285 aa10.32□□□□□ -0.76
SOX9-AS1-211ENST00000533179 E2F4Q16254 413 aa10.31□□□□□ -0.76
SOX9-AS1-211ENST00000533179 AK7Q96M32 723 aa10.31□□□□□ -0.76
SOX9-AS1-211ENST00000533179 CLSTN1O94985 981 aa10.3□□□□□ -0.76
SOX9-AS1-211ENST00000533179 APBB1O00213 710 aa10.29□□□□□ -0.76
SOX9-AS1-211ENST00000533179 SMYD5Q6GMV2 418 aa10.29□□□□□ -0.76
SOX9-AS1-211ENST00000533179 ARID3CA6NKF2 412 aa10.28□□□□□ -0.76
SOX9-AS1-211ENST00000533179 KDM4CQ9H3R0 1056 aa10.27□□□□□ -0.77
SOX9-AS1-211ENST00000533179 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.27□□□□□ -0.77
SOX9-AS1-211ENST00000533179 MKRN3Q13064 507 aaKnown RBP10.25□□□□□ -0.77
SOX9-AS1-211ENST00000533179 RAD21O60216 631 aa10.21□□□□□ -0.77
SOX9-AS1-211ENST00000533179 ZEB1P37275 1124 aaPredicted RBP10.21□□□□□ -0.77
SOX9-AS1-211ENST00000533179 KCTD17Q8N5Z5 321 aa10.21□□□□□ -0.77
SOX9-AS1-211ENST00000533179 PSMD1Q99460 953 aa10.21□□□□□ -0.77
SOX9-AS1-211ENST00000533179 RGS22Q8NE09 1264 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms