RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 POTEJP0CG39 1038 aa13.06□□□□□ -0.32
C11orf54-212ENST00000533154 ASTLQ6HA08 431 aaPredicted RBP13.06□□□□□ -0.32
C11orf54-212ENST00000533154 SLC39A7Q92504 469 aa13.06□□□□□ -0.32
C11orf54-212ENST00000533154 ATMINO43313 823 aaPredicted RBP13.05□□□□□ -0.32
C11orf54-212ENST00000533154 C7P10643 843 aa13.05□□□□□ -0.32
C11orf54-212ENST00000533154 MNX1P50219 401 aaPredicted RBP13.05□□□□□ -0.32
C11orf54-212ENST00000533154 MAMSTRQ6ZN01 415 aa13.02□□□□□ -0.33
C11orf54-212ENST00000533154 FAM163AQ96GL9 167 aaPredicted RBP13□□□□□ -0.33
C11orf54-212ENST00000533154 LCE2DQ5TA82 110 aaPredicted RBP12.95□□□□□ -0.34
C11orf54-212ENST00000533154 SCUBE2Q9NQ36 999 aa12.95□□□□□ -0.34
C11orf54-212ENST00000533154 TSPYL2Q9H2G4 693 aaPredicted RBP12.94□□□□□ -0.34
C11orf54-212ENST00000533154 ATN1P54259 1190 aaPredicted RBP12.92□□□□□ -0.34
C11orf54-212ENST00000533154 CCDC61Q9Y6R9 512 aa12.83□□□□□ -0.36
C11orf54-212ENST00000533154 BMP2KQ9NSY1 1161 aaPredicted RBP12.81□□□□□ -0.36
C11orf54-212ENST00000533154 POTEFA5A3E0 1075 aa12.8□□□□□ -0.36
C11orf54-212ENST00000533154 KIF12Q96FN5 646 aa12.8□□□□□ -0.36
C11orf54-212ENST00000533154 TRPC6Q9Y210 931 aa12.79□□□□□ -0.36
C11orf54-212ENST00000533154 MAP3K13O43283 966 aa12.72□□□□□ -0.37
C11orf54-212ENST00000533154 SEC24BO95487 1268 aa12.72□□□□□ -0.37
C11orf54-212ENST00000533154 CDAN1Q8IWY9 1227 aa12.72□□□□□ -0.37
C11orf54-212ENST00000533154 TIE1P35590 1138 aa12.71□□□□□ -0.37
C11orf54-212ENST00000533154 COLQQ9Y215 455 aaPredicted RBP12.7□□□□□ -0.38
C11orf54-212ENST00000533154 TTLL13PA6NNM8 815 aa12.65□□□□□ -0.38
C11orf54-212ENST00000533154 RASEFQ8IZ41 740 aa12.62□□□□□ -0.39
C11orf54-212ENST00000533154 PLEKHG5O94827 1062 aa12.61□□□□□ -0.39
C11orf54-212ENST00000533154 TRIM35Q9UPQ4 493 aa12.59□□□□□ -0.39
C11orf54-212ENST00000533154 SLAIN1Q8ND83 568 aa12.58□□□□□ -0.4
C11orf54-212ENST00000533154 MIER1Q8N108 512 aa12.57□□□□□ -0.4
C11orf54-212ENST00000533154 PROM2Q8N271 834 aa12.57□□□□□ -0.4
C11orf54-212ENST00000533154 ST18O60284 1047 aa12.56□□□□□ -0.4
C11orf54-212ENST00000533154 IER5LQ5T953 404 aa12.54□□□□□ -0.4
C11orf54-212ENST00000533154 PCDHB13Q9Y5F0 798 aa12.53□□□□□ -0.4
C11orf54-212ENST00000533154 PLCG2P16885 1265 aa12.45□□□□□ -0.42
C11orf54-212ENST00000533154 SGIP1Q9BQI5 828 aa12.45□□□□□ -0.42
C11orf54-212ENST00000533154 MMRN1Q13201 1228 aa12.44□□□□□ -0.42
C11orf54-212ENST00000533154 TMEM106CQ9BVX2 250 aa12.43□□□□□ -0.42
C11orf54-212ENST00000533154 IFNL1Q8IU54 200 aa12.42□□□□□ -0.42
C11orf54-212ENST00000533154 SPNS2Q8IVW8 549 aa12.41□□□□□ -0.42
C11orf54-212ENST00000533154 PLCD3Q8N3E9 789 aa12.41□□□□□ -0.42
C11orf54-212ENST00000533154 IRX5P78411 483 aaPredicted RBP12.34□□□□□ -0.43
C11orf54-212ENST00000533154 MARVELD3Q96A59 401 aa12.34□□□□□ -0.43
C11orf54-212ENST00000533154 TMEM121BQ9BXQ6 578 aaPredicted RBP12.34□□□□□ -0.43
C11orf54-212ENST00000533154 NUBP1P53384 320 aa12.33□□□□□ -0.44
C11orf54-212ENST00000533154 SNPHO15079 494 aa12.3□□□□□ -0.44
C11orf54-212ENST00000533154 FAM212AQ96EL1 285 aa12.3□□□□□ -0.44
C11orf54-212ENST00000533154 ZBTB47Q9UFB7 747 aaPredicted RBP12.3□□□□□ -0.44
C11orf54-212ENST00000533154 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.29□□□□□ -0.44
C11orf54-212ENST00000533154 AMER1Q5JTC6 1135 aaPredicted RBP12.28□□□□□ -0.44
C11orf54-212ENST00000533154 OCEL1Q9H607 264 aa12.28□□□□□ -0.44
C11orf54-212ENST00000533154 RTN4Q9NQC3 1192 aaKnown RBP12.2□□□□□ -0.46
C11orf54-212ENST00000533154 EMP3P54852 163 aa12.19□□□□□ -0.46
C11orf54-212ENST00000533154 SLC24A1O60721 1099 aa12.18□□□□□ -0.46
C11orf54-212ENST00000533154 PYGBP11216 843 aa12.17□□□□□ -0.46
C11orf54-212ENST00000533154 PCDHB8Q9UN66 801 aa12.16□□□□□ -0.46
C11orf54-212ENST00000533154 DCAF8Q5TAQ9 597 aa12.15□□□□□ -0.46
C11orf54-212ENST00000533154 C3orf67Q6ZVT6 689 aa12.14□□□□□ -0.47
C11orf54-212ENST00000533154 FAM205CA6NFA0 338 aa12.1□□□□□ -0.47
C11orf54-212ENST00000533154 HS3ST6Q96QI5 342 aa12.1□□□□□ -0.47
C11orf54-212ENST00000533154 KRTAP3-3Q9BYR6 98 aa12.09□□□□□ -0.47
C11orf54-212ENST00000533154 KRTAP3-2Q9BYR7 98 aa12.09□□□□□ -0.47
C11orf54-212ENST00000533154 POTEB3A0JP26 581 aa12.08□□□□□ -0.48
C11orf54-212ENST00000533154 POTEBQ6S5H4 581 aa12.08□□□□□ -0.48
C11orf54-212ENST00000533154 PDCD7Q8N8D1 485 aaKnown RBP12.07□□□□□ -0.48
C11orf54-212ENST00000533154 GOLGA2Q08379 1002 aa12.06□□□□□ -0.48
C11orf54-212ENST00000533154 FKBP8Q14318 412 aa12.06□□□□□ -0.48
C11orf54-212ENST00000533154 L3MBTL3Q96JM7 780 aaPredicted RBP12.04□□□□□ -0.48
C11orf54-212ENST00000533154 MKRN3Q13064 507 aaKnown RBP12.03□□□□□ -0.48
C11orf54-212ENST00000533154 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.98□□□□□ -0.491e-6■■□□□ 12
C11orf54-212ENST00000533154 ZNF467Q7Z7K2 595 aaPredicted RBP11.93□□□□□ -0.5
C11orf54-212ENST00000533154 PSEN1P49768 467 aa11.87□□□□□ -0.51
C11orf54-212ENST00000533154 G3V3G9 751 aa11.86□□□□□ -0.51
C11orf54-212ENST00000533154 DPY19L2Q6NUT2 758 aa11.86□□□□□ -0.51
C11orf54-212ENST00000533154 GSE1Q14687 1217 aa11.85□□□□□ -0.51
C11orf54-212ENST00000533154 ZNF710Q8N1W2 664 aa11.85□□□□□ -0.51
C11orf54-212ENST00000533154 RNF166Q96A37 237 aaPredicted RBP11.85□□□□□ -0.51
C11orf54-212ENST00000533154 HOXB3P14651 431 aaPredicted RBP11.84□□□□□ -0.51
C11orf54-212ENST00000533154 ERBB3P21860 1342 aa11.84□□□□□ -0.51
C11orf54-212ENST00000533154 KLHL34Q8N239 644 aa11.82□□□□□ -0.52
C11orf54-212ENST00000533154 HOXB1P14653 301 aaPredicted RBP11.8□□□□□ -0.52
C11orf54-212ENST00000533154 BOLA1Q9Y3E2 137 aa11.8□□□□□ -0.52
C11orf54-212ENST00000533154 DOK7Q18PE1 504 aa11.77□□□□□ -0.53
C11orf54-212ENST00000533154 ILDR1Q86SU0 546 aaPredicted RBP11.77□□□□□ -0.53
C11orf54-212ENST00000533154 CABP2Q9NPB3 220 aa11.76□□□□□ -0.53
C11orf54-212ENST00000533154 CHRM1P11229 460 aaPredicted RBP11.75□□□□□ -0.53
C11orf54-212ENST00000533154 PDAP1Q13442 181 aaKnown RBP11.75□□□□□ -0.53
C11orf54-212ENST00000533154 FBXO3Q9UK99 471 aa11.75□□□□□ -0.53
C11orf54-212ENST00000533154 MYT1LQ9UL68 1186 aa11.75□□□□□ -0.53
C11orf54-212ENST00000533154 VARS2Q5ST30 1063 aaKnown RBP11.74□□□□□ -0.53
C11orf54-212ENST00000533154 RIMBP2O15034 1052 aa11.7□□□□□ -0.54
C11orf54-212ENST00000533154 VASPP50552 380 aaPredicted RBP11.65□□□□□ -0.54
C11orf54-212ENST00000533154 ZNF687Q8N1G0 1237 aa11.62□□□□□ -0.55
C11orf54-212ENST00000533154 CIZ1Q9ULV3 898 aaPredicted RBP11.58□□□□□ -0.56
C11orf54-212ENST00000533154 PTGER2P43116 358 aa11.56□□□□□ -0.56
C11orf54-212ENST00000533154 ANKRD13DQ6ZTN6 518 aa11.56□□□□□ -0.56
C11orf54-212ENST00000533154 ZSWIM6Q9HCJ5 1215 aa11.56□□□□□ -0.56
C11orf54-212ENST00000533154 EFCAB3Q8N7B9 438 aa11.54□□□□□ -0.56
C11orf54-212ENST00000533154 GPR153Q6NV75 609 aa11.53□□□□□ -0.56
C11orf54-212ENST00000533154 TMEM92Q6UXU6 159 aa11.53□□□□□ -0.56
C11orf54-212ENST00000533154 MICALL2Q8IY33 904 aa11.52□□□□□ -0.57
C11orf54-212ENST00000533154 ARSIQ5FYB1 569 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms