RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-238ENST00000532791 C14orf37Q86TY3 774 aa25.93■■□□□ 1.74
FGFR1-238ENST00000532791 HIRIP3Q9BW71 556 aaPredicted RBP25.93■■□□□ 1.74
FGFR1-238ENST00000532791 PLEKHG5O94827 1062 aa25.9■■□□□ 1.74
FGFR1-238ENST00000532791 CLIP1P30622 1438 aa25.9■■□□□ 1.74
FGFR1-238ENST00000532791 KCNH8Q96L42 1107 aa25.89■■□□□ 1.74
FGFR1-238ENST00000532791 IRX6P78412 446 aaPredicted RBP25.88■■□□□ 1.73
FGFR1-238ENST00000532791 ZCCHC6Q5VYS8 1495 aaKnown RBP25.87■■□□□ 1.73
FGFR1-238ENST00000532791 PLEKHD1A6NEE1 506 aa25.82■■□□□ 1.72
FGFR1-238ENST00000532791 MIER1Q8N108 512 aa25.8■■□□□ 1.72
FGFR1-238ENST00000532791 RSF1Q96T23 1441 aaPredicted RBP25.79■■□□□ 1.72
FGFR1-238ENST00000532791 CDK11BP21127 795 aaKnown RBP25.77■■□□□ 1.72
FGFR1-238ENST00000532791 RGL3Q3MIN7 710 aa25.77■■□□□ 1.72
FGFR1-238ENST00000532791 CFAP53Q96M91 514 aa25.74■■□□□ 1.71
FGFR1-238ENST00000532791 GLIPR1L2Q4G1C9 344 aa25.72■■□□□ 1.71
FGFR1-238ENST00000532791 BECN1Q14457 450 aa25.71■■□□□ 1.71
FGFR1-238ENST00000532791 HAP1P54257 671 aaPredicted RBP25.69■■□□□ 1.7
FGFR1-238ENST00000532791 NCLP19338 710 aaKnown RBP25.68■■□□□ 1.7
FGFR1-238ENST00000532791 CDCA8Q53HL2 280 aa25.68■■□□□ 1.7
FGFR1-238ENST00000532791 ARID4BQ4LE39 1312 aaPredicted RBP25.68■■□□□ 1.7
FGFR1-238ENST00000532791 DDRGK1Q96HY6 314 aa25.66■■□□□ 1.7
FGFR1-238ENST00000532791 KNSTRNQ9Y448 316 aa25.66■■□□□ 1.7
FGFR1-238ENST00000532791 CFDP1Q9UEE9 299 aaPredicted RBP25.64■■□□□ 1.7
FGFR1-238ENST00000532791 GOLGA3Q08378 1498 aa25.63■■□□□ 1.69
FGFR1-238ENST00000532791 PPM1GO15355 546 aaPredicted RBP25.63■■□□□ 1.69
FGFR1-238ENST00000532791 GOLGA6L22H0YM25 854 aa25.59■■□□□ 1.69
FGFR1-238ENST00000532791 EEA1Q15075 1411 aa25.58■■□□□ 1.69
FGFR1-238ENST00000532791 CARD11Q9BXL7 1154 aa25.58■■□□□ 1.69
FGFR1-238ENST00000532791 CEP162Q5TB80 1403 aa25.57■■□□□ 1.68
FGFR1-238ENST00000532791 SENP3-EIF4A1A0A087X0R7 540 aa25.55■■□□□ 1.68
FGFR1-238ENST00000532791 FTSJ3Q8IY81 847 aaKnown RBP25.55■■□□□ 1.68
FGFR1-238ENST00000532791 CASC1Q6TDU7 716 aa25.53■■□□□ 1.68
FGFR1-238ENST00000532791 ANP32EQ9BTT0 268 aa25.52■■□□□ 1.68
FGFR1-238ENST00000532791 MAPK8IP3Q9UPT6 1336 aa25.52■■□□□ 1.68
FGFR1-238ENST00000532791 TRIM44Q96DX7 344 aaPredicted RBP25.51■■□□□ 1.67
FGFR1-238ENST00000532791 NEUROD2Q15784 382 aa25.5■■□□□ 1.67
FGFR1-238ENST00000532791 LAS1LQ9Y4W2 734 aaKnown RBP25.49■■□□□ 1.67
FGFR1-238ENST00000532791 ZRSR1Q15695 479 aaKnown RBP25.47■■□□□ 1.67
FGFR1-238ENST00000532791 POGKQ9P215 609 aa25.47■■□□□ 1.67
FGFR1-238ENST00000532791 NUDCQ9Y266 331 aa25.47■■□□□ 1.67
FGFR1-238ENST00000532791 RB1CC1Q8TDY2 1594 aa25.46■■□□□ 1.67
FGFR1-238ENST00000532791 WRNQ14191 1432 aaPredicted RBP eCLIP25.46■■□□□ 1.67
FGFR1-238ENST00000532791 LMOD2Q6P5Q4 547 aa25.44■■□□□ 1.66
FGFR1-238ENST00000532791 KIF27Q86VH2 1401 aa25.44■■□□□ 1.66
FGFR1-238ENST00000532791 SUPT16HQ9Y5B9 1047 aaKnown RBP25.4■■□□□ 1.66
FGFR1-238ENST00000532791 BAZ1BQ9UIG0 1483 aaKnown RBP25.38■■□□□ 1.65
FGFR1-238ENST00000532791 PTMAP06454 111 aaKnown RBP25.37■■□□□ 1.65
FGFR1-238ENST00000532791 TPRNQ4KMQ1 711 aa25.36■■□□□ 1.65
FGFR1-238ENST00000532791 TNNT2P45379 298 aaPredicted RBP25.36■■□□□ 1.65
FGFR1-238ENST00000532791 CCDC180Q9P1Z9 1646 aa25.36■■□□□ 1.65
FGFR1-238ENST00000532791 FRAT1Q92837 279 aaPredicted RBP25.34■■□□□ 1.65
FGFR1-238ENST00000532791 CEP164Q9UPV0 1460 aa25.33■■□□□ 1.65
FGFR1-238ENST00000532791 NPHP1O15259 732 aa25.31■■□□□ 1.64
FGFR1-238ENST00000532791 CC2D1BQ5T0F9 858 aaKnown RBP25.31■■□□□ 1.64
FGFR1-238ENST00000532791 TNIKQ9UKE5 1360 aa25.3■■□□□ 1.64
FGFR1-238ENST00000532791 CHMP4BQ9H444 224 aaKnown RBP25.3■■□□□ 1.64
FGFR1-238ENST00000532791 SIN3AQ96ST3 1273 aa25.3■■□□□ 1.64
FGFR1-238ENST00000532791 U2SURPO15042 1029 aaKnown RBP25.3■■□□□ 1.64
FGFR1-238ENST00000532791 RGS3P49796 1198 aa25.29■■□□□ 1.64
FGFR1-238ENST00000532791 OS9Q13438 667 aaPredicted RBP25.28■■□□□ 1.64
FGFR1-238ENST00000532791 TULP1O00294 542 aaPredicted RBP25.27■■□□□ 1.64
FGFR1-238ENST00000532791 ERCC6Q03468 1493 aa25.26■■□□□ 1.63
FGFR1-238ENST00000532791 CCNB3Q8WWL7 1395 aa25.26■■□□□ 1.63
FGFR1-238ENST00000532791 MS4A1P11836 297 aa25.25■■□□□ 1.63
FGFR1-238ENST00000532791 PNNQ9H307 717 aaKnown RBP25.25■■□□□ 1.63
FGFR1-238ENST00000532791 DNTTIP2Q5QJE6 756 aaKnown RBP25.23■■□□□ 1.63
FGFR1-238ENST00000532791 PPP4R2Q9NY27 417 aa25.23■■□□□ 1.63
FGFR1-238ENST00000532791 TAOK2Q9UL54 1235 aa25.22■■□□□ 1.63
FGFR1-238ENST00000532791 TMF1P82094 1093 aa25.21■■□□□ 1.63
FGFR1-238ENST00000532791 MYO15BQ96JP2 1530 aa25.21■■□□□ 1.63
FGFR1-238ENST00000532791 FGD1P98174 961 aa25.21■■□□□ 1.63
FGFR1-238ENST00000532791 KANK1Q14678 1352 aa25.19■■□□□ 1.62
FGFR1-238ENST00000532791 DCAF11Q8TEB1 546 aa25.18■■□□□ 1.62
FGFR1-238ENST00000532791 KCNJ4P48050 445 aa25.17■■□□□ 1.62
FGFR1-238ENST00000532791 HSP90AB1P08238 724 aaKnown RBP25.16■■□□□ 1.62
FGFR1-238ENST00000532791 HDGFP51858 240 aaKnown RBP25.14■■□□□ 1.61
FGFR1-238ENST00000532791 PLCB2Q00722 1185 aa25.13■■□□□ 1.61
FGFR1-238ENST00000532791 GOLGA2Q08379 1002 aa25.13■■□□□ 1.61
FGFR1-238ENST00000532791 SRPK2P78362 688 aaKnown RBP25.12■■□□□ 1.61
FGFR1-238ENST00000532791 NAP1L2Q9ULW6 460 aaPredicted RBP25.12■■□□□ 1.61
FGFR1-238ENST00000532791 FHAD1B1AJZ9 1412 aa25.11■■□□□ 1.61
FGFR1-238ENST00000532791 MLECQ14165 292 aa25.11■■□□□ 1.61
FGFR1-238ENST00000532791 SOX12O15370 315 aa25.1■■□□□ 1.61
FGFR1-238ENST00000532791 EIF4G1Q04637 1599 aaKnown RBP25.09■■□□□ 1.61
FGFR1-238ENST00000532791 MORC1Q86VD1 984 aa25.07■■□□□ 1.6
FGFR1-238ENST00000532791 GOLGA6L6A8MZA4 724 aa25.07■■□□□ 1.6
FGFR1-238ENST00000532791 ERICH6BQ5W0A0 696 aa25.07■■□□□ 1.6
FGFR1-238ENST00000532791 NACADO15069 1562 aa25.05■■□□□ 1.6
FGFR1-238ENST00000532791 SAFB2Q14151 953 aaKnown RBP eCLIP25.04■■□□□ 1.6
FGFR1-238ENST00000532791 TRHP20396 242 aaPredicted RBP25.03■■□□□ 1.6
FGFR1-238ENST00000532791 NOP58Q9Y2X3 529 aaKnown RBP25.02■■□□□ 1.6
FGFR1-238ENST00000532791 B4GALNT3Q6L9W6 998 aa25.02■■□□□ 1.6
FGFR1-238ENST00000532791 CARMIL1Q5VZK9 1371 aa25■■□□□ 1.59
FGFR1-238ENST00000532791 GOLGA6L4A6NEF3 574 aa25■■□□□ 1.59
FGFR1-238ENST00000532791 HSCBQ8IWL3 235 aa25■■□□□ 1.59
FGFR1-238ENST00000532791 RTF1Q92541 710 aaKnown RBP24.98■■□□□ 1.59
FGFR1-238ENST00000532791 NRDCO43847 1150 aa24.97■■□□□ 1.59
FGFR1-238ENST00000532791 MCCP23508 829 aa24.97■■□□□ 1.59
FGFR1-238ENST00000532791 NAP1L5Q96NT1 182 aaPredicted RBP24.96■■□□□ 1.59
FGFR1-238ENST00000532791 CUX2O14529 1486 aa24.96■■□□□ 1.59
FGFR1-238ENST00000532791 GGT6Q6P531 493 aa24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms