RNA–Protein interactions for RNA: ENST00000532785.1

LMO7-222, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-222ENST00000532785 AMER1Q5JTC6 1135 aaPredicted RBP19.21■□□□□ 0.67
LMO7-222ENST00000532785 EVX2Q03828 476 aa19.14■□□□□ 0.65
LMO7-222ENST00000532785 CCDC61Q9Y6R9 512 aa19.14■□□□□ 0.65
LMO7-222ENST00000532785 TRIM41Q8WV44 630 aa19.11■□□□□ 0.65
LMO7-222ENST00000532785 ZNF579Q8NAF0 562 aaKnown RBP19.1■□□□□ 0.65
LMO7-222ENST00000532785 PYGBP11216 843 aa19.09■□□□□ 0.65
LMO7-222ENST00000532785 PHF12Q96QT6 1004 aa19.09■□□□□ 0.65
LMO7-222ENST00000532785 RTN4Q9NQC3 1192 aaKnown RBP19.08■□□□□ 0.64
LMO7-222ENST00000532785 ECM2O94769 699 aaPredicted RBP19.06■□□□□ 0.64
LMO7-222ENST00000532785 PKD2Q13563 968 aa19.06■□□□□ 0.64
LMO7-222ENST00000532785 CHRM1P11229 460 aaPredicted RBP18.97■□□□□ 0.63
LMO7-222ENST00000532785 KIF12Q96FN5 646 aa18.97■□□□□ 0.63
LMO7-222ENST00000532785 MAP3K13O43283 966 aa18.93■□□□□ 0.62
LMO7-222ENST00000532785 CLCN6P51797 869 aa18.93■□□□□ 0.62
LMO7-222ENST00000532785 SP7Q8TDD2 431 aaPredicted RBP18.93■□□□□ 0.62
LMO7-222ENST00000532785 PCDHB13Q9Y5F0 798 aa18.93■□□□□ 0.62
LMO7-222ENST00000532785 SGIP1Q9BQI5 828 aa18.88■□□□□ 0.61
LMO7-222ENST00000532785 ZNF467Q7Z7K2 595 aaPredicted RBP18.85■□□□□ 0.61
LMO7-222ENST00000532785 MS4A3Q96HJ5 214 aa18.85■□□□□ 0.61
LMO7-222ENST00000532785 GABBR2O75899 941 aa18.83■□□□□ 0.6
LMO7-222ENST00000532785 IFNL1Q8IU54 200 aa18.81■□□□□ 0.6
LMO7-222ENST00000532785 PCDHB8Q9UN66 801 aa18.81■□□□□ 0.6
LMO7-222ENST00000532785 RGL2O15211 777 aa18.8■□□□□ 0.6
LMO7-222ENST00000532785 DCAF8L2P0C7V8 631 aa18.8■□□□□ 0.6
LMO7-222ENST00000532785 RIOK3O14730 519 aaKnown RBP18.79■□□□□ 0.6
LMO7-222ENST00000532785 GALR2O43603 387 aaPredicted RBP18.79■□□□□ 0.6
LMO7-222ENST00000532785 RNF25Q96BH1 459 aaPredicted RBP18.76■□□□□ 0.59
LMO7-222ENST00000532785 TAOK2Q9UL54 1235 aa18.75■□□□□ 0.59
LMO7-222ENST00000532785 VGFO15240 615 aaPredicted RBP18.68■□□□□ 0.58
LMO7-222ENST00000532785 PDAP1Q13442 181 aaKnown RBP18.67■□□□□ 0.58
LMO7-222ENST00000532785 PSEN1P49768 467 aa18.64■□□□□ 0.57
LMO7-222ENST00000532785 DCBLD2Q96PD2 775 aa18.64■□□□□ 0.57
LMO7-222ENST00000532785 TRPC6Q9Y210 931 aa18.63■□□□□ 0.57
LMO7-222ENST00000532785 TIE1P35590 1138 aa18.6■□□□□ 0.57
LMO7-222ENST00000532785 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.58■□□□□ 0.56
LMO7-222ENST00000532785 ZFP91Q96JP5 570 aaPredicted RBP18.58■□□□□ 0.56
LMO7-222ENST00000532785 TMEM106CQ9BVX2 250 aa18.58■□□□□ 0.56
LMO7-222ENST00000532785 BMP2KQ9NSY1 1161 aaPredicted RBP18.54■□□□□ 0.56
LMO7-222ENST00000532785 STK25O00506 426 aa18.53■□□□□ 0.56
LMO7-222ENST00000532785 TTLL13PA6NNM8 815 aa18.52■□□□□ 0.56
LMO7-222ENST00000532785 CHGAP10645 457 aaKnown RBP18.5■□□□□ 0.55
LMO7-222ENST00000532785 GOLGA2Q08379 1002 aa18.49■□□□□ 0.55
LMO7-222ENST00000532785 STK24Q9Y6E0 443 aa18.49■□□□□ 0.55
LMO7-222ENST00000532785 BCL11BQ9C0K0 894 aaPredicted RBP18.48■□□□□ 0.55
LMO7-222ENST00000532785 ATMINO43313 823 aaPredicted RBP18.46■□□□□ 0.55
LMO7-222ENST00000532785 ASTLQ6HA08 431 aaPredicted RBP18.46■□□□□ 0.55
LMO7-222ENST00000532785 ATN1P54259 1190 aaPredicted RBP18.43■□□□□ 0.54
LMO7-222ENST00000532785 CABP2Q9NPB3 220 aa18.43■□□□□ 0.54
LMO7-222ENST00000532785 HS6ST3Q8IZP7 471 aa18.42■□□□□ 0.54
LMO7-222ENST00000532785 TRIM35Q9UPQ4 493 aa18.42■□□□□ 0.54
LMO7-222ENST00000532785 POTEIP0CG38 1075 aa18.37■□□□□ 0.53
LMO7-222ENST00000532785 MKRN3Q13064 507 aaKnown RBP18.35■□□□□ 0.53
LMO7-222ENST00000532785 PELP1Q8IZL8 1130 aaKnown RBP18.29■□□□□ 0.52
LMO7-222ENST00000532785 EFCAB3Q8N7B9 438 aa18.29■□□□□ 0.52
LMO7-222ENST00000532785 SLC39A7Q92504 469 aa18.28■□□□□ 0.52
LMO7-222ENST00000532785 IER5LQ5T953 404 aa18.25■□□□□ 0.51
LMO7-222ENST00000532785 C7P10643 843 aa18.22■□□□□ 0.51
LMO7-222ENST00000532785 SEC24BO95487 1268 aa18.21■□□□□ 0.51
LMO7-222ENST00000532785 METRNQ9UJH8 293 aa18.21■□□□□ 0.51
LMO7-222ENST00000532785 SOX12O15370 315 aa18.2■□□□□ 0.5
LMO7-222ENST00000532785 BBXQ8WY36 941 aaPredicted RBP18.2■□□□□ 0.5
LMO7-222ENST00000532785 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.18■□□□□ 0.53e-9■■■□□ 19.1
LMO7-222ENST00000532785 DNAJC5Q9H3Z4 198 aa18.17■□□□□ 0.5
LMO7-222ENST00000532785 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.17■□□□□ 0.5
LMO7-222ENST00000532785 PLCG2P16885 1265 aa18.16■□□□□ 0.5
LMO7-222ENST00000532785 NLRP6P59044 892 aa18.13■□□□□ 0.49
LMO7-222ENST00000532785 PHF8Q9UPP1 1060 aa18.12■□□□□ 0.49
LMO7-222ENST00000532785 IRX5P78411 483 aaPredicted RBP18.11■□□□□ 0.49
LMO7-222ENST00000532785 NKX1-1Q15270 411 aaPredicted RBP18.11■□□□□ 0.49
LMO7-222ENST00000532785 OCEL1Q9H607 264 aa18.11■□□□□ 0.49
LMO7-222ENST00000532785 MFRPQ9BY79 579 aa18.09■□□□□ 0.49
LMO7-222ENST00000532785 RYDENQ9NUL5 291 aaKnown RBP18.09■□□□□ 0.49
LMO7-222ENST00000532785 COLQQ9Y215 455 aaPredicted RBP18.06■□□□□ 0.48
LMO7-222ENST00000532785 FBXO22Q8NEZ5 403 aa18.01■□□□□ 0.47
LMO7-222ENST00000532785 PDCD7Q8N8D1 485 aaKnown RBP18■□□□□ 0.47
LMO7-222ENST00000532785 ILDR1Q86SU0 546 aaPredicted RBP17.99■□□□□ 0.47
LMO7-222ENST00000532785 POTEFA5A3E0 1075 aa17.98■□□□□ 0.47
LMO7-222ENST00000532785 PAXIP1Q6ZW49 1069 aaPredicted RBP17.98■□□□□ 0.47
LMO7-222ENST00000532785 SPRYD3Q8NCJ5 442 aa17.98■□□□□ 0.47
LMO7-222ENST00000532785 CFAP44Q96MT7 982 aa17.98■□□□□ 0.47
LMO7-222ENST00000532785 G3V3G9 751 aa17.96■□□□□ 0.47
LMO7-222ENST00000532785 MS4A4AQ96JQ5 239 aa17.96■□□□□ 0.47
LMO7-222ENST00000532785 GTPBP6O43824 516 aaPredicted RBP17.95■□□□□ 0.46
LMO7-222ENST00000532785 DPY19L2Q6NUT2 758 aa17.93■□□□□ 0.46
LMO7-222ENST00000532785 L3MBTL3Q96JM7 780 aaPredicted RBP17.91■□□□□ 0.46
LMO7-222ENST00000532785 BOLA1Q9Y3E2 137 aa17.85■□□□□ 0.45
LMO7-222ENST00000532785 PPP1R37O75864 691 aa17.83■□□□□ 0.44
LMO7-222ENST00000532785 PLCB2Q00722 1185 aa17.8■□□□□ 0.44
LMO7-222ENST00000532785 POTEB2H3BUK9 544 aa17.79■□□□□ 0.44
LMO7-222ENST00000532785 LHX8Q68G74 356 aa17.78■□□□□ 0.44
LMO7-222ENST00000532785 C3orf67Q6ZVT6 689 aa17.78■□□□□ 0.44
LMO7-222ENST00000532785 MICALL2Q8IY33 904 aa17.78■□□□□ 0.44
LMO7-222ENST00000532785 MAMSTRQ6ZN01 415 aa17.75■□□□□ 0.43
LMO7-222ENST00000532785 SCUBE2Q9NQ36 999 aa17.74■□□□□ 0.43
LMO7-222ENST00000532785 POTEJP0CG39 1038 aa17.7■□□□□ 0.42
LMO7-222ENST00000532785 TMEM121BQ9BXQ6 578 aaPredicted RBP17.7■□□□□ 0.42
LMO7-222ENST00000532785 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.7■□□□□ 0.42
LMO7-222ENST00000532785 HAP1P54257 671 aaPredicted RBP17.63■□□□□ 0.41
LMO7-222ENST00000532785 SLAIN1Q8ND83 568 aa17.56■□□□□ 0.4
LMO7-222ENST00000532785 TMC2Q8TDI7 906 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms