RNA–Protein interactions for RNA: ENST00000532412.1

CBX3P8-201, Transcript of chromobox 3 pseudogene 8, humanhuman

BASIC

Gene CBX3P8, Length 525 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P8-201ENST00000532412 C7P10643 843 aa8.73□□□□□ -1.01
CBX3P8-201ENST00000532412 LCE2DQ5TA82 110 aaPredicted RBP8.73□□□□□ -1.01
CBX3P8-201ENST00000532412 MAMSTRQ6ZN01 415 aa8.72□□□□□ -1.01
CBX3P8-201ENST00000532412 SLC39A7Q92504 469 aa8.72□□□□□ -1.01
CBX3P8-201ENST00000532412 ATMINO43313 823 aaPredicted RBP8.7□□□□□ -1.02
CBX3P8-201ENST00000532412 MNX1P50219 401 aaPredicted RBP8.69□□□□□ -1.02
CBX3P8-201ENST00000532412 NPM1P06748 294 aaKnown RBP eCLIP8.68□□□□□ -1.02
CBX3P8-201ENST00000532412 PROM2Q8N271 834 aa8.68□□□□□ -1.02
CBX3P8-201ENST00000532412 FKBP8Q14318 412 aa8.67□□□□□ -1.02
CBX3P8-201ENST00000532412 MS4A3Q96HJ5 214 aa8.66□□□□□ -1.02
CBX3P8-201ENST00000532412 FAM163AQ96GL9 167 aaPredicted RBP8.64□□□□□ -1.03
CBX3P8-201ENST00000532412 SCUBE2Q9NQ36 999 aa8.62□□□□□ -1.03
CBX3P8-201ENST00000532412 ATN1P54259 1190 aaPredicted RBP8.58□□□□□ -1.04
CBX3P8-201ENST00000532412 POTEFA5A3E0 1075 aa8.55□□□□□ -1.04
CBX3P8-201ENST00000532412 PLEKHG5O94827 1062 aa8.55□□□□□ -1.04
CBX3P8-201ENST00000532412 CDAN1Q8IWY9 1227 aa8.52□□□□□ -1.05
CBX3P8-201ENST00000532412 CCDC61Q9Y6R9 512 aa8.52□□□□□ -1.05
CBX3P8-201ENST00000532412 KIF12Q96FN5 646 aa8.49□□□□□ -1.05
CBX3P8-201ENST00000532412 BMP2KQ9NSY1 1161 aaPredicted RBP8.49□□□□□ -1.05
CBX3P8-201ENST00000532412 FBXO3Q9UK99 471 aa8.49□□□□□ -1.05
CBX3P8-201ENST00000532412 TSPYL2Q9H2G4 693 aaPredicted RBP8.48□□□□□ -1.05
CBX3P8-201ENST00000532412 TIE1P35590 1138 aa8.46□□□□□ -1.06
CBX3P8-201ENST00000532412 MIER1Q8N108 512 aa8.46□□□□□ -1.06
CBX3P8-201ENST00000532412 ZBTB47Q9UFB7 747 aaPredicted RBP8.45□□□□□ -1.06
CBX3P8-201ENST00000532412 TRPC6Q9Y210 931 aa8.45□□□□□ -1.06
CBX3P8-201ENST00000532412 PLCD3Q8N3E9 789 aa8.44□□□□□ -1.06
CBX3P8-201ENST00000532412 COLQQ9Y215 455 aaPredicted RBP8.43□□□□□ -1.06
CBX3P8-201ENST00000532412 MAP3K13O43283 966 aa8.4□□□□□ -1.06
CBX3P8-201ENST00000532412 TTLL13PA6NNM8 815 aa8.39□□□□□ -1.07
CBX3P8-201ENST00000532412 SEC24BO95487 1268 aa8.39□□□□□ -1.07
CBX3P8-201ENST00000532412 ST18O60284 1047 aa8.38□□□□□ -1.07
CBX3P8-201ENST00000532412 IER5LQ5T953 404 aa8.37□□□□□ -1.07
CBX3P8-201ENST00000532412 MMRN1Q13201 1228 aa8.36□□□□□ -1.07
CBX3P8-201ENST00000532412 VASPP50552 380 aaPredicted RBP8.33□□□□□ -1.08
CBX3P8-201ENST00000532412 SPNS2Q8IVW8 549 aa8.33□□□□□ -1.08
CBX3P8-201ENST00000532412 SLAIN1Q8ND83 568 aa8.33□□□□□ -1.08
CBX3P8-201ENST00000532412 TRIM35Q9UPQ4 493 aa8.33□□□□□ -1.08
CBX3P8-201ENST00000532412 SGIP1Q9BQI5 828 aa8.31□□□□□ -1.08
CBX3P8-201ENST00000532412 RASEFQ8IZ41 740 aa8.3□□□□□ -1.08
CBX3P8-201ENST00000532412 TMEM121BQ9BXQ6 578 aaPredicted RBP8.29□□□□□ -1.08
CBX3P8-201ENST00000532412 FAM212AQ96EL1 285 aa8.28□□□□□ -1.08
CBX3P8-201ENST00000532412 KLHL34Q8N239 644 aa8.27□□□□□ -1.09
CBX3P8-201ENST00000532412 PCDHB13Q9Y5F0 798 aa8.24□□□□□ -1.09
CBX3P8-201ENST00000532412 NUBP1P53384 320 aa8.23□□□□□ -1.09
CBX3P8-201ENST00000532412 PLCG2P16885 1265 aa8.22□□□□□ -1.09
CBX3P8-201ENST00000532412 IRX5P78411 483 aaPredicted RBP8.21□□□□□ -1.1
CBX3P8-201ENST00000532412 SNPHO15079 494 aa8.2□□□□□ -1.1
CBX3P8-201ENST00000532412 IFNL1Q8IU54 200 aa8.19□□□□□ -1.1
CBX3P8-201ENST00000532412 TMEM106CQ9BVX2 250 aa8.18□□□□□ -1.1
CBX3P8-201ENST00000532412 DCAF8Q5TAQ9 597 aa8.16□□□□□ -1.1
CBX3P8-201ENST00000532412 IFNLR1Q8IU57 520 aaPredicted RBP8.16□□□□□ -1.1
CBX3P8-201ENST00000532412 MARVELD3Q96A59 401 aa8.16□□□□□ -1.1
CBX3P8-201ENST00000532412 SPOCK2Q92563 424 aa8.15□□□□□ -1.1
CBX3P8-201ENST00000532412 OCEL1Q9H607 264 aa8.15□□□□□ -1.1
CBX3P8-201ENST00000532412 GSE1Q14687 1217 aa8.14□□□□□ -1.11
CBX3P8-201ENST00000532412 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.13□□□□□ -1.11
CBX3P8-201ENST00000532412 KRTAP3-3Q9BYR6 98 aa8.1□□□□□ -1.11
CBX3P8-201ENST00000532412 KRTAP3-2Q9BYR7 98 aa8.1□□□□□ -1.11
CBX3P8-201ENST00000532412 EMP3P54852 163 aa8.07□□□□□ -1.12
CBX3P8-201ENST00000532412 POTEB3A0JP26 581 aa8.06□□□□□ -1.12
CBX3P8-201ENST00000532412 PYGBP11216 843 aa8.06□□□□□ -1.12
CBX3P8-201ENST00000532412 POTEBQ6S5H4 581 aa8.06□□□□□ -1.12
CBX3P8-201ENST00000532412 ZNF467Q7Z7K2 595 aaPredicted RBP8.06□□□□□ -1.12
CBX3P8-201ENST00000532412 CIZ1Q9ULV3 898 aaPredicted RBP8.06□□□□□ -1.12
CBX3P8-201ENST00000532412 HS3ST6Q96QI5 342 aa8.05□□□□□ -1.12
CBX3P8-201ENST00000532412 CHRM1P11229 460 aaPredicted RBP8.03□□□□□ -1.12
CBX3P8-201ENST00000532412 TRIM41Q8WV44 630 aa8.02□□□□□ -1.13
CBX3P8-201ENST00000532412 FAM205CA6NFA0 338 aa8.01□□□□□ -1.13
CBX3P8-201ENST00000532412 PDCD7Q8N8D1 485 aaKnown RBP8.01□□□□□ -1.13
CBX3P8-201ENST00000532412 C3orf67Q6ZVT6 689 aa7.99□□□□□ -1.13
CBX3P8-201ENST00000532412 L3MBTL3Q96JM7 780 aaPredicted RBP7.97□□□□□ -1.13
CBX3P8-201ENST00000532412 GOLGA2Q08379 1002 aa7.96□□□□□ -1.14
CBX3P8-201ENST00000532412 PCDHB8Q9UN66 801 aa7.96□□□□□ -1.14
CBX3P8-201ENST00000532412 PDAP1Q13442 181 aaKnown RBP7.93□□□□□ -1.14
CBX3P8-201ENST00000532412 MKRN3Q13064 507 aaKnown RBP7.92□□□□□ -1.14
CBX3P8-201ENST00000532412 PSEN1P49768 467 aa7.9□□□□□ -1.14
CBX3P8-201ENST00000532412 HOXB3P14651 431 aaPredicted RBP7.88□□□□□ -1.15
CBX3P8-201ENST00000532412 ILDR1Q86SU0 546 aaPredicted RBP7.88□□□□□ -1.15
CBX3P8-201ENST00000532412 RNF166Q96A37 237 aaPredicted RBP7.88□□□□□ -1.15
CBX3P8-201ENST00000532412 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.87□□□□□ -1.15
CBX3P8-201ENST00000532412 HOXB1P14653 301 aaPredicted RBP7.86□□□□□ -1.15
CBX3P8-201ENST00000532412 RIOK3O14730 519 aaKnown RBP7.85□□□□□ -1.15
CBX3P8-201ENST00000532412 TAOK2Q9UL54 1235 aa7.85□□□□□ -1.15
CBX3P8-201ENST00000532412 ECM2O94769 699 aaPredicted RBP7.84□□□□□ -1.15
CBX3P8-201ENST00000532412 MYT1LQ9UL68 1186 aa7.82□□□□□ -1.16
CBX3P8-201ENST00000532412 ERBB3P21860 1342 aa7.81□□□□□ -1.16
CBX3P8-201ENST00000532412 VGFO15240 615 aaPredicted RBP7.81□□□□□ -1.16
CBX3P8-201ENST00000532412 DPY19L2Q6NUT2 758 aa7.8□□□□□ -1.16
CBX3P8-201ENST00000532412 ZNF710Q8N1W2 664 aa7.8□□□□□ -1.16
CBX3P8-201ENST00000532412 RNF25Q96BH1 459 aaPredicted RBP7.8□□□□□ -1.16
CBX3P8-201ENST00000532412 CABP2Q9NPB3 220 aa7.8□□□□□ -1.16
CBX3P8-201ENST00000532412 G3V3G9 751 aa7.79□□□□□ -1.16
CBX3P8-201ENST00000532412 PKD2Q13563 968 aa7.79□□□□□ -1.16
CBX3P8-201ENST00000532412 BOLA1Q9Y3E2 137 aa7.79□□□□□ -1.16
CBX3P8-201ENST00000532412 DOK7Q18PE1 504 aa7.78□□□□□ -1.16
CBX3P8-201ENST00000532412 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.76□□□□□ -1.17
CBX3P8-201ENST00000532412 VARS2Q5ST30 1063 aaKnown RBP7.76□□□□□ -1.17
CBX3P8-201ENST00000532412 ZFP91Q96JP5 570 aaPredicted RBP7.76□□□□□ -1.17
CBX3P8-201ENST00000532412 PTGER2P43116 358 aa7.75□□□□□ -1.17
CBX3P8-201ENST00000532412 ZNF687Q8N1G0 1237 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms