RNA–Protein interactions for RNA: ENST00000532406.1

KNL1-210, Transcript of kinetochore scaffold 1, humanhuman

TSL 3

Gene KNL1, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-210ENST00000532406 CREBZFQ9NS37 354 aa9.95□□□□□ -0.82
KNL1-210ENST00000532406 PRR29P0C7W0 189 aa9.94□□□□□ -0.82
KNL1-210ENST00000532406 MNX1P50219 401 aaPredicted RBP9.94□□□□□ -0.82
KNL1-210ENST00000532406 TAOK2Q9UL54 1235 aa9.93□□□□□ -0.82
KNL1-210ENST00000532406 REM2Q8IYK8 340 aaPredicted RBP9.92□□□□□ -0.82
KNL1-210ENST00000532406 FAM212AQ96EL1 285 aa9.91□□□□□ -0.82
KNL1-210ENST00000532406 CLEC11AQ9Y240 323 aa9.91□□□□□ -0.82
KNL1-210ENST00000532406 RIOK3O14730 519 aaKnown RBP9.9□□□□□ -0.82
KNL1-210ENST00000532406 DCAF8Q5TAQ9 597 aa9.9□□□□□ -0.82
KNL1-210ENST00000532406 CHRM1P11229 460 aaPredicted RBP9.89□□□□□ -0.83
KNL1-210ENST00000532406 TSHZ2Q9NRE2 1034 aa9.89□□□□□ -0.83
KNL1-210ENST00000532406 SGIP1Q9BQI5 828 aa9.84□□□□□ -0.83
KNL1-210ENST00000532406 VGFO15240 615 aaPredicted RBP9.83□□□□□ -0.84
KNL1-210ENST00000532406 RASEFQ8IZ41 740 aa9.82□□□□□ -0.84
KNL1-210ENST00000532406 NKX1-1Q15270 411 aaPredicted RBP9.81□□□□□ -0.84
KNL1-210ENST00000532406 PITPNM1O00562 1244 aa9.8□□□□□ -0.84
KNL1-210ENST00000532406 STK25O00506 426 aa9.77□□□□□ -0.85
KNL1-210ENST00000532406 GTPBP6O43824 516 aaPredicted RBP9.77□□□□□ -0.85
KNL1-210ENST00000532406 RYDENQ9NUL5 291 aaKnown RBP9.74□□□□□ -0.85
KNL1-210ENST00000532406 PRKCSHP14314 528 aaPredicted RBP9.73□□□□□ -0.85
KNL1-210ENST00000532406 NISCHQ9Y2I1 1504 aa9.72□□□□□ -0.85
KNL1-210ENST00000532406 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.71□□□□□ -0.86
KNL1-210ENST00000532406 ZFP91Q96JP5 570 aaPredicted RBP9.71□□□□□ -0.86
KNL1-210ENST00000532406 BCL11BQ9C0K0 894 aaPredicted RBP9.71□□□□□ -0.86
KNL1-210ENST00000532406 PYGBP11216 843 aa9.7□□□□□ -0.86
KNL1-210ENST00000532406 STK24Q9Y6E0 443 aa9.69□□□□□ -0.86
KNL1-210ENST00000532406 TPRNQ4KMQ1 711 aa9.67□□□□□ -0.86
KNL1-210ENST00000532406 NBR1Q14596 966 aa9.65□□□□□ -0.86
KNL1-210ENST00000532406 ZNF467Q7Z7K2 595 aaPredicted RBP9.65□□□□□ -0.86
KNL1-210ENST00000532406 FARP1Q9Y4F1 1045 aaPredicted RBP9.64□□□□□ -0.87
KNL1-210ENST00000532406 CHADLQ6NUI6 762 aa9.62□□□□□ -0.87
KNL1-210ENST00000532406 PDAP1Q13442 181 aaKnown RBP9.59□□□□□ -0.87
KNL1-210ENST00000532406 TSPYL2Q9H2G4 693 aaPredicted RBP9.59□□□□□ -0.87
KNL1-210ENST00000532406 CCDC61Q9Y6R9 512 aa9.57□□□□□ -0.88
KNL1-210ENST00000532406 FXR2P51116 673 aaKnown RBP eCLIP9.56□□□□□ -0.88
KNL1-210ENST00000532406 PRKAR2AP13861 404 aaKnown RBP9.55□□□□□ -0.88
KNL1-210ENST00000532406 ZNF579Q8NAF0 562 aaKnown RBP9.55□□□□□ -0.88
KNL1-210ENST00000532406 P3H3Q8IVL6 736 aa9.51□□□□□ -0.89
KNL1-210ENST00000532406 PCDHB8Q9UN66 801 aa9.51□□□□□ -0.89
KNL1-210ENST00000532406 PCDHB13Q9Y5F0 798 aa9.51□□□□□ -0.89
KNL1-210ENST00000532406 PSEN1P49768 467 aa9.5□□□□□ -0.89
KNL1-210ENST00000532406 PAK3O75914 559 aaPredicted RBP9.48□□□□□ -0.89
KNL1-210ENST00000532406 MFRPQ9BY79 579 aa9.47□□□□□ -0.89
KNL1-210ENST00000532406 CADPS2Q86UW7 1296 aa9.44□□□□□ -0.9
KNL1-210ENST00000532406 IFNL1Q8IU54 200 aa9.44□□□□□ -0.9
KNL1-210ENST00000532406 KIF12Q96FN5 646 aa9.43□□□□□ -0.9
KNL1-210ENST00000532406 CHRDL2Q6WN34 429 aa9.42□□□□□ -0.9
KNL1-210ENST00000532406 WDR70Q9NW82 654 aa9.42□□□□□ -0.9
KNL1-210ENST00000532406 SOX12O15370 315 aa9.41□□□□□ -0.9
KNL1-210ENST00000532406 MAP3K13O43283 966 aa9.41□□□□□ -0.9
KNL1-210ENST00000532406 PIP4P2Q8N4L2 257 aa9.41□□□□□ -0.9
KNL1-210ENST00000532406 NLRP6P59044 892 aa9.4□□□□□ -0.9
KNL1-210ENST00000532406 FBXO22Q8NEZ5 403 aa9.4□□□□□ -0.9
KNL1-210ENST00000532406 KCNV2Q8TDN2 545 aa9.4□□□□□ -0.9
KNL1-210ENST00000532406 EFCAB3Q8N7B9 438 aa9.37□□□□□ -0.91
KNL1-210ENST00000532406 CABP2Q9NPB3 220 aa9.36□□□□□ -0.91
KNL1-210ENST00000532406 PPP1R37O75864 691 aa9.35□□□□□ -0.91
KNL1-210ENST00000532406 PHF8Q9UPP1 1060 aa9.34□□□□□ -0.91
KNL1-210ENST00000532406 ARHGEF1Q92888 912 aaKnown RBP9.32□□□□□ -0.92
KNL1-210ENST00000532406 ZRANB1Q9UGI0 708 aa9.32□□□□□ -0.92
KNL1-210ENST00000532406 CD44P16070 742 aaKnown RBP9.31□□□□□ -0.92
KNL1-210ENST00000532406 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.3□□□□□ -0.92
KNL1-210ENST00000532406 E2F4Q16254 413 aa9.28□□□□□ -0.92
KNL1-210ENST00000532406 LMOD2Q6P5Q4 547 aa9.27□□□□□ -0.93
KNL1-210ENST00000532406 PHF12Q96QT6 1004 aa9.27□□□□□ -0.93
KNL1-210ENST00000532406 MS4A4AQ96JQ5 239 aa9.26□□□□□ -0.93
KNL1-210ENST00000532406 TULP1O00294 542 aaPredicted RBP9.25□□□□□ -0.93
KNL1-210ENST00000532406 NCKAP5LQ9HCH0 1330 aa9.25□□□□□ -0.93
KNL1-210ENST00000532406 MFSD10Q14728 455 aa9.24□□□□□ -0.93
KNL1-210ENST00000532406 PDE4AP27815 886 aa9.23□□□□□ -0.93
KNL1-210ENST00000532406 TMEM106CQ9BVX2 250 aa9.23□□□□□ -0.93
KNL1-210ENST00000532406 GOLGA2Q08379 1002 aa9.22□□□□□ -0.93
KNL1-210ENST00000532406 CRISPLD2Q9H0B8 497 aa9.22□□□□□ -0.93
KNL1-210ENST00000532406 ARIH1Q9Y4X5 557 aaPredicted RBP9.22□□□□□ -0.93
KNL1-210ENST00000532406 TESPA1A2RU30 521 aaPredicted RBP9.2□□□□□ -0.94
KNL1-210ENST00000532406 C19orf67A6NJJ6 358 aa9.2□□□□□ -0.94
KNL1-210ENST00000532406 TIE1P35590 1138 aa9.19□□□□□ -0.94
KNL1-210ENST00000532406 ILDR1Q86SU0 546 aaPredicted RBP9.19□□□□□ -0.94
KNL1-210ENST00000532406 MS4A3Q96HJ5 214 aa9.19□□□□□ -0.94
KNL1-210ENST00000532406 LARP6Q9BRS8 491 aaKnown RBP9.19□□□□□ -0.94
KNL1-210ENST00000532406 MKRN3Q13064 507 aaKnown RBP9.18□□□□□ -0.94
KNL1-210ENST00000532406 DDX27Q96GQ7 796 aaKnown RBP9.18□□□□□ -0.94
KNL1-210ENST00000532406 TRPC6Q9Y210 931 aa9.18□□□□□ -0.94
KNL1-210ENST00000532406 CAMK2BQ13554 666 aa9.17□□□□□ -0.94
KNL1-210ENST00000532406 SEMA3EO15041 775 aa9.16□□□□□ -0.94
KNL1-210ENST00000532406 TMEM132AQ24JP5 1023 aa9.16□□□□□ -0.94
KNL1-210ENST00000532406 TTLL13PA6NNM8 815 aa9.13□□□□□ -0.95
KNL1-210ENST00000532406 ZC3H15Q8WU90 426 aaKnown RBP9.13□□□□□ -0.95
KNL1-210ENST00000532406 SMYD5Q6GMV2 418 aa9.12□□□□□ -0.95
KNL1-210ENST00000532406 CLCN6P51797 869 aa9.1□□□□□ -0.95
KNL1-210ENST00000532406 GPHNQ9NQX3 736 aaPredicted RBP9.1□□□□□ -0.95
KNL1-210ENST00000532406 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.1□□□□□ -0.958e-9■■□□□ 13.5
KNL1-210ENST00000532406 BMP2KQ9NSY1 1161 aaPredicted RBP9.09□□□□□ -0.95
KNL1-210ENST00000532406 GTF3C3Q9Y5Q9 886 aa9.08□□□□□ -0.96
KNL1-210ENST00000532406 PPP1R15BQ5SWA1 713 aa9.06□□□□□ -0.96
KNL1-210ENST00000532406 TRIM35Q9UPQ4 493 aa9.06□□□□□ -0.96
KNL1-210ENST00000532406 ZMYND10O75800 440 aa9.05□□□□□ -0.96
KNL1-210ENST00000532406 BRPF1P55201 1214 aaPredicted RBP9.05□□□□□ -0.96
KNL1-210ENST00000532406 ERICH6Q7L0X2 663 aa9.05□□□□□ -0.96
KNL1-210ENST00000532406 GALR2O43603 387 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms