RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-209ENST00000532347 SLC24A1O60721 1099 aa18.17■□□□□ 0.5
KNL1-209ENST00000532347 PIP4P2Q8N4L2 257 aa18.13■□□□□ 0.49
KNL1-209ENST00000532347 RNF25Q96BH1 459 aaPredicted RBP18.03■□□□□ 0.48
KNL1-209ENST00000532347 TSPYL2Q9H2G4 693 aaPredicted RBP18■□□□□ 0.47
KNL1-209ENST00000532347 CHRM1P11229 460 aaPredicted RBP17.99■□□□□ 0.47
KNL1-209ENST00000532347 PYGBP11216 843 aa17.96■□□□□ 0.47
KNL1-209ENST00000532347 RIOK3O14730 519 aaKnown RBP17.93■□□□□ 0.46
KNL1-209ENST00000532347 PLCB2Q00722 1185 aa17.93■□□□□ 0.46
KNL1-209ENST00000532347 CHGAP10645 457 aaKnown RBP17.91■□□□□ 0.46
KNL1-209ENST00000532347 BBXQ8WY36 941 aaPredicted RBP17.9■□□□□ 0.46
KNL1-209ENST00000532347 CCDC61Q9Y6R9 512 aa17.84■□□□□ 0.45
KNL1-209ENST00000532347 TAOK2Q9UL54 1235 aa17.83■□□□□ 0.44
KNL1-209ENST00000532347 HS6ST3Q8IZP7 471 aa17.82■□□□□ 0.44
KNL1-209ENST00000532347 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.82■□□□□ 0.44
KNL1-209ENST00000532347 PAK3O75914 559 aaPredicted RBP17.81■□□□□ 0.44
KNL1-209ENST00000532347 VGFO15240 615 aaPredicted RBP17.8■□□□□ 0.44
KNL1-209ENST00000532347 NISCHQ9Y2I1 1504 aa17.78■□□□□ 0.44
KNL1-209ENST00000532347 CD44P16070 742 aaKnown RBP17.73■□□□□ 0.43
KNL1-209ENST00000532347 STK25O00506 426 aa17.71■□□□□ 0.43
KNL1-209ENST00000532347 PAXIP1Q6ZW49 1069 aaPredicted RBP17.71■□□□□ 0.43
KNL1-209ENST00000532347 SGIP1Q9BQI5 828 aa17.71■□□□□ 0.43
KNL1-209ENST00000532347 ZNF467Q7Z7K2 595 aaPredicted RBP17.7■□□□□ 0.42
KNL1-209ENST00000532347 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.69■□□□□ 0.42
KNL1-209ENST00000532347 ZFP91Q96JP5 570 aaPredicted RBP17.69■□□□□ 0.42
KNL1-209ENST00000532347 ZRANB1Q9UGI0 708 aa17.69■□□□□ 0.42
KNL1-209ENST00000532347 HAP1P54257 671 aaPredicted RBP17.67■□□□□ 0.42
KNL1-209ENST00000532347 CFAP44Q96MT7 982 aa17.67■□□□□ 0.42
KNL1-209ENST00000532347 DNAJC5Q9H3Z4 198 aa17.67■□□□□ 0.42
KNL1-209ENST00000532347 PCDHB8Q9UN66 801 aa17.66■□□□□ 0.42
KNL1-209ENST00000532347 PCDHB13Q9Y5F0 798 aa17.66■□□□□ 0.42
KNL1-209ENST00000532347 SPRYD3Q8NCJ5 442 aa17.64■□□□□ 0.41
KNL1-209ENST00000532347 KIF12Q96FN5 646 aa17.64■□□□□ 0.41
KNL1-209ENST00000532347 ZNF579Q8NAF0 562 aaKnown RBP17.63■□□□□ 0.41
KNL1-209ENST00000532347 BCL11BQ9C0K0 894 aaPredicted RBP17.63■□□□□ 0.41
KNL1-209ENST00000532347 MAP3K13O43283 966 aa17.62■□□□□ 0.41
KNL1-209ENST00000532347 C19orf67A6NJJ6 358 aa17.61■□□□□ 0.41
KNL1-209ENST00000532347 STK24Q9Y6E0 443 aa17.61■□□□□ 0.41
KNL1-209ENST00000532347 NKX1-1Q15270 411 aaPredicted RBP17.59■□□□□ 0.41
KNL1-209ENST00000532347 PDAP1Q13442 181 aaKnown RBP17.58■□□□□ 0.4
KNL1-209ENST00000532347 IFNL1Q8IU54 200 aa17.58■□□□□ 0.4
KNL1-209ENST00000532347 PHF12Q96QT6 1004 aa17.58■□□□□ 0.4
KNL1-209ENST00000532347 PSEN1P49768 467 aa17.52■□□□□ 0.4
KNL1-209ENST00000532347 GTPBP6O43824 516 aaPredicted RBP17.45■□□□□ 0.38
KNL1-209ENST00000532347 SP7Q8TDD2 431 aaPredicted RBP17.43■□□□□ 0.38
KNL1-209ENST00000532347 HAX1O00165 279 aa17.42■□□□□ 0.38
KNL1-209ENST00000532347 TSHZ2Q9NRE2 1034 aa17.4■□□□□ 0.38
KNL1-209ENST00000532347 VSIG10Q8N0Z9 540 aa17.39■□□□□ 0.37
KNL1-209ENST00000532347 MS4A3Q96HJ5 214 aa17.38■□□□□ 0.37
KNL1-209ENST00000532347 EVX2Q03828 476 aa17.34■□□□□ 0.37
KNL1-209ENST00000532347 RYDENQ9NUL5 291 aaKnown RBP17.33■□□□□ 0.36
KNL1-209ENST00000532347 CABP2Q9NPB3 220 aa17.31■□□□□ 0.36
KNL1-209ENST00000532347 TRPC6Q9Y210 931 aa17.31■□□□□ 0.36
KNL1-209ENST00000532347 KDM2AQ9Y2K7 1162 aa17.31■□□□□ 0.36
KNL1-209ENST00000532347 EFCAB3Q8N7B9 438 aa17.27■□□□□ 0.36
KNL1-209ENST00000532347 TMEM106CQ9BVX2 250 aa17.26■□□□□ 0.35
KNL1-209ENST00000532347 MFRPQ9BY79 579 aa17.26■□□□□ 0.35
KNL1-209ENST00000532347 GALR2O43603 387 aaPredicted RBP17.22■□□□□ 0.35
KNL1-209ENST00000532347 SOX12O15370 315 aa17.18■□□□□ 0.34
KNL1-209ENST00000532347 TIE1P35590 1138 aa17.18■□□□□ 0.34
KNL1-209ENST00000532347 CLCN6P51797 869 aa17.17■□□□□ 0.34
KNL1-209ENST00000532347 TTLL13PA6NNM8 815 aa17.15■□□□□ 0.34
KNL1-209ENST00000532347 FBXO22Q8NEZ5 403 aa17.15■□□□□ 0.34
KNL1-209ENST00000532347 PHF8Q9UPP1 1060 aa17.15■□□□□ 0.34
KNL1-209ENST00000532347 NLRP6P59044 892 aa17.14■□□□□ 0.33
KNL1-209ENST00000532347 GOLGA2Q08379 1002 aa17.14■□□□□ 0.33
KNL1-209ENST00000532347 BMP2KQ9NSY1 1161 aaPredicted RBP17.14■□□□□ 0.33
KNL1-209ENST00000532347 MKRN3Q13064 507 aaKnown RBP17.06■□□□□ 0.32
KNL1-209ENST00000532347 PPP1R37O75864 691 aa17.05■□□□□ 0.32
KNL1-209ENST00000532347 TRIM35Q9UPQ4 493 aa17.03■□□□□ 0.32
KNL1-209ENST00000532347 MS4A4AQ96JQ5 239 aa17.02■□□□□ 0.32
KNL1-209ENST00000532347 GABBR2O75899 941 aa17■□□□□ 0.31
KNL1-209ENST00000532347 CADPS2Q86UW7 1296 aa16.99■□□□□ 0.31
KNL1-209ENST00000532347 ATN1P54259 1190 aaPredicted RBP16.97■□□□□ 0.31
KNL1-209ENST00000532347 ATMINO43313 823 aaPredicted RBP16.95■□□□□ 0.3
KNL1-209ENST00000532347 ASTLQ6HA08 431 aaPredicted RBP16.95■□□□□ 0.3
KNL1-209ENST00000532347 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.93■□□□□ 0.31e-6■■■■□ 25.5
KNL1-209ENST00000532347 ILDR1Q86SU0 546 aaPredicted RBP16.92■□□□□ 0.3
KNL1-209ENST00000532347 BCANQ96GW7 911 aa16.92■□□□□ 0.3
KNL1-209ENST00000532347 DCBLD2Q96PD2 775 aa16.82■□□□□ 0.28
KNL1-209ENST00000532347 IER5LQ5T953 404 aa16.81■□□□□ 0.28
KNL1-209ENST00000532347 IRX5P78411 483 aaPredicted RBP16.8■□□□□ 0.28
KNL1-209ENST00000532347 PDCD7Q8N8D1 485 aaKnown RBP16.8■□□□□ 0.28
KNL1-209ENST00000532347 DPY19L2Q6NUT2 758 aa16.79■□□□□ 0.28
KNL1-209ENST00000532347 WDR70Q9NW82 654 aa16.78■□□□□ 0.28
KNL1-209ENST00000532347 PELP1Q8IZL8 1130 aaKnown RBP16.77■□□□□ 0.28
KNL1-209ENST00000532347 OCEL1Q9H607 264 aa16.76■□□□□ 0.27
KNL1-209ENST00000532347 NCKAP5LQ9HCH0 1330 aa16.73■□□□□ 0.27
KNL1-209ENST00000532347 PLCG2P16885 1265 aa16.69■□□□□ 0.26
KNL1-209ENST00000532347 NBR1Q14596 966 aa16.68■□□□□ 0.26
KNL1-209ENST00000532347 CRISPLD2Q9H0B8 497 aa16.68■□□□□ 0.26
KNL1-209ENST00000532347 POTEIP0CG38 1075 aa16.67■□□□□ 0.26
KNL1-209ENST00000532347 PDE4AP27815 886 aa16.67■□□□□ 0.26
KNL1-209ENST00000532347 P3H3Q8IVL6 736 aa16.67■□□□□ 0.26
KNL1-209ENST00000532347 MICALL2Q8IY33 904 aa16.67■□□□□ 0.26
KNL1-209ENST00000532347 LARP6Q9BRS8 491 aaKnown RBP16.67■□□□□ 0.26
KNL1-209ENST00000532347 KCNV2Q8TDN2 545 aa16.65■□□□□ 0.26
KNL1-209ENST00000532347 COLQQ9Y215 455 aaPredicted RBP16.65■□□□□ 0.26
KNL1-209ENST00000532347 SEC24BO95487 1268 aa16.64■□□□□ 0.25
KNL1-209ENST00000532347 SLC39A7Q92504 469 aa16.64■□□□□ 0.25
KNL1-209ENST00000532347 BOLA1Q9Y3E2 137 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms