RNA–Protein interactions for RNA: ENST00000531957.1

ATM-217, Transcript of ATM serine/threonine kinase, humanhuman

TSL 4

Gene ATM, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-217ENST00000531957 ZBTB47Q9UFB7 747 aaPredicted RBP11.45□□□□□ -0.58
ATM-217ENST00000531957 PLCD3Q8N3E9 789 aa11.43□□□□□ -0.58
ATM-217ENST00000531957 SLC39A7Q92504 469 aa11.42□□□□□ -0.58
ATM-217ENST00000531957 ATMINO43313 823 aaPredicted RBP11.4□□□□□ -0.58
ATM-217ENST00000531957 METRNQ9UJH8 293 aa11.4□□□□□ -0.58
ATM-217ENST00000531957 C7P10643 843 aa11.39□□□□□ -0.59
ATM-217ENST00000531957 KIF12Q96FN5 646 aa11.39□□□□□ -0.59
ATM-217ENST00000531957 PELP1Q8IZL8 1130 aaKnown RBP11.38□□□□□ -0.59
ATM-217ENST00000531957 RASEFQ8IZ41 740 aa11.37□□□□□ -0.59
ATM-217ENST00000531957 OTUD5Q96G74 571 aa11.34□□□□□ -0.59
ATM-217ENST00000531957 POTEB2H3BUK9 544 aa11.33□□□□□ -0.6
ATM-217ENST00000531957 TIE1P35590 1138 aa11.32□□□□□ -0.6
ATM-217ENST00000531957 MAP3K13O43283 966 aa11.31□□□□□ -0.6
ATM-217ENST00000531957 ATN1P54259 1190 aaPredicted RBP11.3□□□□□ -0.6
ATM-217ENST00000531957 MAMSTRQ6ZN01 415 aa11.3□□□□□ -0.6
ATM-217ENST00000531957 FAM212AQ96EL1 285 aa11.28□□□□□ -0.6
ATM-217ENST00000531957 SGIP1Q9BQI5 828 aa11.28□□□□□ -0.6
ATM-217ENST00000531957 BMP2KQ9NSY1 1161 aaPredicted RBP11.28□□□□□ -0.6
ATM-217ENST00000531957 NUBP1P53384 320 aa11.25□□□□□ -0.61
ATM-217ENST00000531957 FBXO3Q9UK99 471 aa11.25□□□□□ -0.61
ATM-217ENST00000531957 SCUBE2Q9NQ36 999 aa11.23□□□□□ -0.61
ATM-217ENST00000531957 PCDHB13Q9Y5F0 798 aa11.23□□□□□ -0.61
ATM-217ENST00000531957 TRPC6Q9Y210 931 aa11.22□□□□□ -0.61
ATM-217ENST00000531957 TTLL13PA6NNM8 815 aa11.2□□□□□ -0.62
ATM-217ENST00000531957 IER5LQ5T953 404 aa11.17□□□□□ -0.62
ATM-217ENST00000531957 SEC24BO95487 1268 aa11.15□□□□□ -0.62
ATM-217ENST00000531957 POTEJP0CG39 1038 aa11.15□□□□□ -0.62
ATM-217ENST00000531957 TRIM35Q9UPQ4 493 aa11.14□□□□□ -0.63
ATM-217ENST00000531957 POTEFA5A3E0 1075 aa11.12□□□□□ -0.63
ATM-217ENST00000531957 POTEMA6NI47 508 aa11.12□□□□□ -0.63
ATM-217ENST00000531957 IFNL1Q8IU54 200 aa11.12□□□□□ -0.63
ATM-217ENST00000531957 DCAF8Q5TAQ9 597 aa11.09□□□□□ -0.63
ATM-217ENST00000531957 POTEGQ6S5H5 508 aa11.08□□□□□ -0.64
ATM-217ENST00000531957 TMEM106CQ9BVX2 250 aa11.08□□□□□ -0.64
ATM-217ENST00000531957 PLSCR2Q9NRY7 297 aa11.08□□□□□ -0.64
ATM-217ENST00000531957 VASPP50552 380 aaPredicted RBP11.06□□□□□ -0.64
ATM-217ENST00000531957 COLQQ9Y215 455 aaPredicted RBP11.06□□□□□ -0.64
ATM-217ENST00000531957 PLCG2P16885 1265 aa11.03□□□□□ -0.64
ATM-217ENST00000531957 PYGBP11216 843 aa11.02□□□□□ -0.65
ATM-217ENST00000531957 GSE1Q14687 1217 aa11.02□□□□□ -0.65
ATM-217ENST00000531957 KLHL34Q8N239 644 aa11.02□□□□□ -0.65
ATM-217ENST00000531957 PCDH10Q9P2E7 1040 aa11.02□□□□□ -0.65
ATM-217ENST00000531957 ZNF467Q7Z7K2 595 aaPredicted RBP10.97□□□□□ -0.65
ATM-217ENST00000531957 FAM163AQ96GL9 167 aaPredicted RBP10.97□□□□□ -0.65
ATM-217ENST00000531957 IRX5P78411 483 aaPredicted RBP10.95□□□□□ -0.66
ATM-217ENST00000531957 LCE2DQ5TA82 110 aaPredicted RBP10.94□□□□□ -0.66
ATM-217ENST00000531957 PCDHB8Q9UN66 801 aa10.93□□□□□ -0.66
ATM-217ENST00000531957 SLAIN1Q8ND83 568 aa10.92□□□□□ -0.66
ATM-217ENST00000531957 OCEL1Q9H607 264 aa10.92□□□□□ -0.66
ATM-217ENST00000531957 CHRM1P11229 460 aaPredicted RBP10.9□□□□□ -0.66
ATM-217ENST00000531957 GOLGA2Q08379 1002 aa10.89□□□□□ -0.67
ATM-217ENST00000531957 MKRN3Q13064 507 aaKnown RBP10.85□□□□□ -0.67
ATM-217ENST00000531957 IFNLR1Q8IU57 520 aaPredicted RBP10.85□□□□□ -0.67
ATM-217ENST00000531957 SPOCK2Q92563 424 aa10.84□□□□□ -0.67
ATM-217ENST00000531957 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.84□□□□□ -0.67
ATM-217ENST00000531957 SNPHO15079 494 aa10.81□□□□□ -0.68
ATM-217ENST00000531957 PSEN1P49768 467 aa10.81□□□□□ -0.68
ATM-217ENST00000531957 PDAP1Q13442 181 aaKnown RBP10.79□□□□□ -0.68
ATM-217ENST00000531957 C3orf67Q6ZVT6 689 aa10.79□□□□□ -0.68
ATM-217ENST00000531957 PDCD7Q8N8D1 485 aaKnown RBP10.78□□□□□ -0.68
ATM-217ENST00000531957 L3MBTL3Q96JM7 780 aaPredicted RBP10.78□□□□□ -0.68
ATM-217ENST00000531957 CIZ1Q9ULV3 898 aaPredicted RBP10.78□□□□□ -0.68
ATM-217ENST00000531957 ST18O60284 1047 aa10.77□□□□□ -0.69
ATM-217ENST00000531957 TMEM121BQ9BXQ6 578 aaPredicted RBP10.76□□□□□ -0.69
ATM-217ENST00000531957 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.75□□□□□ -0.694e-11■■■□□ 17.8
ATM-217ENST00000531957 TRIM41Q8WV44 630 aa10.74□□□□□ -0.69
ATM-217ENST00000531957 CDAN1Q8IWY9 1227 aa10.73□□□□□ -0.69
ATM-217ENST00000531957 G3V3G9 751 aa10.68□□□□□ -0.7
ATM-217ENST00000531957 CABP2Q9NPB3 220 aa10.68□□□□□ -0.7
ATM-217ENST00000531957 ILDR1Q86SU0 546 aaPredicted RBP10.67□□□□□ -0.7
ATM-217ENST00000531957 BOLA1Q9Y3E2 137 aa10.6□□□□□ -0.71
ATM-217ENST00000531957 EMP3P54852 163 aa10.57□□□□□ -0.72
ATM-217ENST00000531957 MARVELD3Q96A59 401 aa10.57□□□□□ -0.72
ATM-217ENST00000531957 DPY19L2Q6NUT2 758 aa10.55□□□□□ -0.72
ATM-217ENST00000531957 RIOK3O14730 519 aaKnown RBP10.52□□□□□ -0.73
ATM-217ENST00000531957 EFCAB3Q8N7B9 438 aa10.51□□□□□ -0.73
ATM-217ENST00000531957 VGFO15240 615 aaPredicted RBP10.5□□□□□ -0.73
ATM-217ENST00000531957 DOK7Q18PE1 504 aa10.48□□□□□ -0.73
ATM-217ENST00000531957 SOX12O15370 315 aa10.47□□□□□ -0.73
ATM-217ENST00000531957 TAOK2Q9UL54 1235 aa10.47□□□□□ -0.73
ATM-217ENST00000531957 ZNF710Q8N1W2 664 aa10.46□□□□□ -0.73
ATM-217ENST00000531957 HS3ST6Q96QI5 342 aa10.46□□□□□ -0.73
ATM-217ENST00000531957 RIMBP2O15034 1052 aa10.45□□□□□ -0.74
ATM-217ENST00000531957 SPNS2Q8IVW8 549 aa10.45□□□□□ -0.74
ATM-217ENST00000531957 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.44□□□□□ -0.74
ATM-217ENST00000531957 FAM205CA6NFA0 338 aa10.44□□□□□ -0.74
ATM-217ENST00000531957 HOXB3P14651 431 aaPredicted RBP10.44□□□□□ -0.74
ATM-217ENST00000531957 MMRN1Q13201 1228 aa10.44□□□□□ -0.74
ATM-217ENST00000531957 RNF25Q96BH1 459 aaPredicted RBP10.44□□□□□ -0.74
ATM-217ENST00000531957 ZFP91Q96JP5 570 aaPredicted RBP10.44□□□□□ -0.74
ATM-217ENST00000531957 MICALL2Q8IY33 904 aa10.43□□□□□ -0.74
ATM-217ENST00000531957 HOXB1P14653 301 aaPredicted RBP10.41□□□□□ -0.74
ATM-217ENST00000531957 PKD2Q13563 968 aa10.37□□□□□ -0.75
ATM-217ENST00000531957 KRTAP3-3Q9BYR6 98 aa10.37□□□□□ -0.75
ATM-217ENST00000531957 KRTAP3-2Q9BYR7 98 aa10.37□□□□□ -0.75
ATM-217ENST00000531957 ZSWIM6Q9HCJ5 1215 aa10.37□□□□□ -0.75
ATM-217ENST00000531957 PHF8Q9UPP1 1060 aa10.36□□□□□ -0.75
ATM-217ENST00000531957 POTEB3A0JP26 581 aa10.35□□□□□ -0.75
ATM-217ENST00000531957 ECM2O94769 699 aaPredicted RBP10.35□□□□□ -0.75
ATM-217ENST00000531957 NLRP6P59044 892 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms