RNA–Protein interactions for RNA: ENST00000531613.1

PCDHA8-202, Transcript of protocadherin alpha 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA8, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8-202ENST00000531613 EEA1Q15075 1411 aa23.28■■□□□ 1.32
PCDHA8-202ENST00000531613 GOLGA3Q08378 1498 aa23.2■■□□□ 1.31
PCDHA8-202ENST00000531613 HIRIP3Q9BW71 556 aaPredicted RBP23.17■■□□□ 1.3
PCDHA8-202ENST00000531613 MYH16Q9H6N6 1097 aa23.17■■□□□ 1.3
PCDHA8-202ENST00000531613 A0A0G2JS52 829 aa23.16■■□□□ 1.3
PCDHA8-202ENST00000531613 CFDP1Q9UEE9 299 aaPredicted RBP23.16■■□□□ 1.3
PCDHA8-202ENST00000531613 C14orf37Q86TY3 774 aa23.16■■□□□ 1.3
PCDHA8-202ENST00000531613 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
PCDHA8-202ENST00000531613 RGL3Q3MIN7 710 aa23.15■■□□□ 1.3
PCDHA8-202ENST00000531613 SENP3Q9H4L4 574 aaPredicted RBP23.14■■□□□ 1.3
PCDHA8-202ENST00000531613 BAZ1BQ9UIG0 1483 aaKnown RBP23.14■■□□□ 1.29
PCDHA8-202ENST00000531613 ZBTB7CA1YPR0 619 aa23.12■■□□□ 1.29
PCDHA8-202ENST00000531613 KIF27Q86VH2 1401 aa23.12■■□□□ 1.29
PCDHA8-202ENST00000531613 CEP162Q5TB80 1403 aa23.12■■□□□ 1.29
PCDHA8-202ENST00000531613 ARID4BQ4LE39 1312 aaPredicted RBP23.09■■□□□ 1.29
PCDHA8-202ENST00000531613 CDCA8Q53HL2 280 aa23.08■■□□□ 1.29
PCDHA8-202ENST00000531613 PLEKHG5O94827 1062 aa23.08■■□□□ 1.29
PCDHA8-202ENST00000531613 CFAP53Q96M91 514 aa23.05■■□□□ 1.28
PCDHA8-202ENST00000531613 MIER1Q8N108 512 aa23.04■■□□□ 1.28
PCDHA8-202ENST00000531613 NACADO15069 1562 aa23.03■■□□□ 1.28
PCDHA8-202ENST00000531613 KNSTRNQ9Y448 316 aa23■■□□□ 1.27
PCDHA8-202ENST00000531613 HAP1P54257 671 aaPredicted RBP22.98■■□□□ 1.27
PCDHA8-202ENST00000531613 IRX6P78412 446 aaPredicted RBP22.98■■□□□ 1.27
PCDHA8-202ENST00000531613 CEP164Q9UPV0 1460 aa22.97■■□□□ 1.27
PCDHA8-202ENST00000531613 CARD11Q9BXL7 1154 aa22.96■■□□□ 1.27
PCDHA8-202ENST00000531613 TNIKQ9UKE5 1360 aa22.95■■□□□ 1.26
PCDHA8-202ENST00000531613 ERCC6Q03468 1493 aa22.95■■□□□ 1.26
PCDHA8-202ENST00000531613 PPM1GO15355 546 aaPredicted RBP22.91■■□□□ 1.26
PCDHA8-202ENST00000531613 EIF5BO60841 1220 aaKnown RBP22.87■■□□□ 1.25
PCDHA8-202ENST00000531613 POGKQ9P215 609 aa22.87■■□□□ 1.25
PCDHA8-202ENST00000531613 NBR1Q14596 966 aa22.86■■□□□ 1.25
PCDHA8-202ENST00000531613 ARXQ96QS3 562 aa22.83■■□□□ 1.25
PCDHA8-202ENST00000531613 NUDCQ9Y266 331 aa22.83■■□□□ 1.25
PCDHA8-202ENST00000531613 MAPK8IP3Q9UPT6 1336 aa22.82■■□□□ 1.24
PCDHA8-202ENST00000531613 BECN1Q14457 450 aa22.82■■□□□ 1.24
PCDHA8-202ENST00000531613 CCNB3Q8WWL7 1395 aa22.82■■□□□ 1.24
PCDHA8-202ENST00000531613 BAZ1AQ9NRL2 1556 aaPredicted RBP22.78■■□□□ 1.24
PCDHA8-202ENST00000531613 FHAD1B1AJZ9 1412 aa22.78■■□□□ 1.24
PCDHA8-202ENST00000531613 LMOD2Q6P5Q4 547 aa22.78■■□□□ 1.24
PCDHA8-202ENST00000531613 FTSJ3Q8IY81 847 aaKnown RBP22.78■■□□□ 1.24
PCDHA8-202ENST00000531613 NEUROD2Q15784 382 aa22.77■■□□□ 1.24
PCDHA8-202ENST00000531613 DDRGK1Q96HY6 314 aa22.77■■□□□ 1.24
PCDHA8-202ENST00000531613 MYO15BQ96JP2 1530 aa22.75■■□□□ 1.23
PCDHA8-202ENST00000531613 NCLP19338 710 aaKnown RBP22.75■■□□□ 1.23
PCDHA8-202ENST00000531613 CDK11BP21127 795 aaKnown RBP22.75■■□□□ 1.23
PCDHA8-202ENST00000531613 SENP3-EIF4A1A0A087X0R7 540 aa22.73■■□□□ 1.23
PCDHA8-202ENST00000531613 SIN3AQ96ST3 1273 aa22.73■■□□□ 1.23
PCDHA8-202ENST00000531613 CARMIL1Q5VZK9 1371 aa22.72■■□□□ 1.23
PCDHA8-202ENST00000531613 LAS1LQ9Y4W2 734 aaKnown RBP22.72■■□□□ 1.23
PCDHA8-202ENST00000531613 GOLGA6L22H0YM25 854 aa22.7■■□□□ 1.23
PCDHA8-202ENST00000531613 KANK1Q14678 1352 aa22.7■■□□□ 1.22
PCDHA8-202ENST00000531613 CASC1Q6TDU7 716 aa22.69■■□□□ 1.22
PCDHA8-202ENST00000531613 CUX2O14529 1486 aa22.68■■□□□ 1.22
PCDHA8-202ENST00000531613 TNNT2P45379 298 aaPredicted RBP22.66■■□□□ 1.22
PCDHA8-202ENST00000531613 HDGFP51858 240 aaKnown RBP22.66■■□□□ 1.22
PCDHA8-202ENST00000531613 ANP32EQ9BTT0 268 aa22.66■■□□□ 1.22
PCDHA8-202ENST00000531613 TMF1P82094 1093 aa22.65■■□□□ 1.22
PCDHA8-202ENST00000531613 DCAF11Q8TEB1 546 aa22.65■■□□□ 1.22
PCDHA8-202ENST00000531613 EIF4G1Q04637 1599 aaKnown RBP22.64■■□□□ 1.22
PCDHA8-202ENST00000531613 SUPT16HQ9Y5B9 1047 aaKnown RBP22.64■■□□□ 1.22
PCDHA8-202ENST00000531613 U2SURPO15042 1029 aaKnown RBP22.63■■□□□ 1.21
PCDHA8-202ENST00000531613 CHMP4BQ9H444 224 aaKnown RBP22.63■■□□□ 1.21
PCDHA8-202ENST00000531613 CC2D1BQ5T0F9 858 aaKnown RBP22.62■■□□□ 1.21
PCDHA8-202ENST00000531613 PNNQ9H307 717 aaKnown RBP22.62■■□□□ 1.21
PCDHA8-202ENST00000531613 TRHP20396 242 aaPredicted RBP22.61■■□□□ 1.21
PCDHA8-202ENST00000531613 MLECQ14165 292 aa22.6■■□□□ 1.21
PCDHA8-202ENST00000531613 FRAT1Q92837 279 aaPredicted RBP22.6■■□□□ 1.21
PCDHA8-202ENST00000531613 CECR2Q9BXF3 1484 aa22.59■■□□□ 1.21
PCDHA8-202ENST00000531613 MS4A1P11836 297 aa22.59■■□□□ 1.21
PCDHA8-202ENST00000531613 ZRSR1Q15695 479 aaKnown RBP22.57■■□□□ 1.2
PCDHA8-202ENST00000531613 TIMELESSQ9UNS1 1208 aa22.57■■□□□ 1.2
PCDHA8-202ENST00000531613 NPHP1O15259 732 aa22.55■■□□□ 1.2
PCDHA8-202ENST00000531613 SRPK2P78362 688 aaKnown RBP22.55■■□□□ 1.2
PCDHA8-202ENST00000531613 TRIM44Q96DX7 344 aaPredicted RBP22.54■■□□□ 1.2
PCDHA8-202ENST00000531613 GLIPR1L2Q4G1C9 344 aa22.54■■□□□ 1.2
PCDHA8-202ENST00000531613 GGT6Q6P531 493 aa22.51■■□□□ 1.19
PCDHA8-202ENST00000531613 OS9Q13438 667 aaPredicted RBP22.51■■□□□ 1.19
PCDHA8-202ENST00000531613 SOGA1O94964 1423 aa22.51■■□□□ 1.19
PCDHA8-202ENST00000531613 CARMIL2Q6F5E8 1435 aa22.51■■□□□ 1.19
PCDHA8-202ENST00000531613 RGS3P49796 1198 aa22.5■■□□□ 1.19
PCDHA8-202ENST00000531613 PPP4R2Q9NY27 417 aa22.5■■□□□ 1.19
PCDHA8-202ENST00000531613 MORC1Q86VD1 984 aa22.47■■□□□ 1.19
PCDHA8-202ENST00000531613 SOX12O15370 315 aa22.46■■□□□ 1.19
PCDHA8-202ENST00000531613 SAFB2Q14151 953 aaKnown RBP eCLIP22.45■■□□□ 1.18
PCDHA8-202ENST00000531613 PKD2Q13563 968 aa22.45■■□□□ 1.18
PCDHA8-202ENST00000531613 PDS5BQ9NTI5 1447 aa22.45■■□□□ 1.18
PCDHA8-202ENST00000531613 ARHGAP35Q9NRY4 1499 aa22.45■■□□□ 1.18
PCDHA8-202ENST00000531613 SETD5Q9C0A6 1442 aa22.43■■□□□ 1.18
PCDHA8-202ENST00000531613 FGD1P98174 961 aa22.42■■□□□ 1.18
PCDHA8-202ENST00000531613 PTMAP06454 111 aaKnown RBP22.41■■□□□ 1.18
PCDHA8-202ENST00000531613 EFCAB2Q5VUJ9 269 aa22.41■■□□□ 1.18
PCDHA8-202ENST00000531613 VPS8Q8N3P4 1428 aa22.41■■□□□ 1.18
PCDHA8-202ENST00000531613 KCNJ4P48050 445 aa22.4■■□□□ 1.18
PCDHA8-202ENST00000531613 HDGFL2Q7Z4V5 671 aaPredicted RBP22.38■■□□□ 1.17
PCDHA8-202ENST00000531613 GOLGA2Q08379 1002 aa22.38■■□□□ 1.17
PCDHA8-202ENST00000531613 STK26Q9P289 416 aa22.38■■□□□ 1.17
PCDHA8-202ENST00000531613 TPRNQ4KMQ1 711 aa22.37■■□□□ 1.17
PCDHA8-202ENST00000531613 RTF1Q92541 710 aaKnown RBP22.36■■□□□ 1.17
PCDHA8-202ENST00000531613 TDRD9Q8NDG6 1382 aaKnown RBP22.35■■□□□ 1.17
PCDHA8-202ENST00000531613 HSPA5P11021 654 aaKnown RBP22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms