RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 ATMINO43313 823 aaPredicted RBP16.66■□□□□ 0.26
CASP4-210ENST00000531546 PELP1Q8IZL8 1130 aaKnown RBP16.66■□□□□ 0.26
CASP4-210ENST00000531546 ZBTB47Q9UFB7 747 aaPredicted RBP16.66■□□□□ 0.26
CASP4-210ENST00000531546 SLC39A7Q92504 469 aa16.65■□□□□ 0.26
CASP4-210ENST00000531546 KIF12Q96FN5 646 aa16.64■□□□□ 0.25
CASP4-210ENST00000531546 METRNQ9UJH8 293 aa16.63■□□□□ 0.25
CASP4-210ENST00000531546 FKBP8Q14318 412 aa16.62■□□□□ 0.25
CASP4-210ENST00000531546 RASEFQ8IZ41 740 aa16.62■□□□□ 0.25
CASP4-210ENST00000531546 C7P10643 843 aa16.61■□□□□ 0.25
CASP4-210ENST00000531546 POTEB2H3BUK9 544 aa16.59■□□□□ 0.25
CASP4-210ENST00000531546 OTUD5Q96G74 571 aa16.59■□□□□ 0.25
CASP4-210ENST00000531546 MAP3K13O43283 966 aa16.53■□□□□ 0.24
CASP4-210ENST00000531546 ATN1P54259 1190 aaPredicted RBP16.51■□□□□ 0.23
CASP4-210ENST00000531546 TIE1P35590 1138 aa16.5■□□□□ 0.23
CASP4-210ENST00000531546 BMP2KQ9NSY1 1161 aaPredicted RBP16.48■□□□□ 0.23
CASP4-210ENST00000531546 NUBP1P53384 320 aa16.45■□□□□ 0.22
CASP4-210ENST00000531546 MAMSTRQ6ZN01 415 aa16.45■□□□□ 0.22
CASP4-210ENST00000531546 SGIP1Q9BQI5 828 aa16.45■□□□□ 0.22
CASP4-210ENST00000531546 FAM212AQ96EL1 285 aa16.44■□□□□ 0.22
CASP4-210ENST00000531546 TRPC6Q9Y210 931 aa16.43■□□□□ 0.22
CASP4-210ENST00000531546 FBXO3Q9UK99 471 aa16.41■□□□□ 0.22
CASP4-210ENST00000531546 PCDHB13Q9Y5F0 798 aa16.4■□□□□ 0.22
CASP4-210ENST00000531546 TTLL13PA6NNM8 815 aa16.36■□□□□ 0.21
CASP4-210ENST00000531546 SCUBE2Q9NQ36 999 aa16.35■□□□□ 0.21
CASP4-210ENST00000531546 POTEJP0CG39 1038 aa16.34■□□□□ 0.21
CASP4-210ENST00000531546 SEC24BO95487 1268 aa16.28■□□□□ 0.2
CASP4-210ENST00000531546 TRIM35Q9UPQ4 493 aa16.28■□□□□ 0.2
CASP4-210ENST00000531546 POTEFA5A3E0 1075 aa16.27■□□□□ 0.2
CASP4-210ENST00000531546 IER5LQ5T953 404 aa16.27■□□□□ 0.2
CASP4-210ENST00000531546 IFNL1Q8IU54 200 aa16.26■□□□□ 0.19
CASP4-210ENST00000531546 POTEMA6NI47 508 aa16.23■□□□□ 0.19
CASP4-210ENST00000531546 DCAF8Q5TAQ9 597 aa16.21■□□□□ 0.19
CASP4-210ENST00000531546 TMEM106CQ9BVX2 250 aa16.19■□□□□ 0.18
CASP4-210ENST00000531546 POTEGQ6S5H5 508 aa16.18■□□□□ 0.18
CASP4-210ENST00000531546 COLQQ9Y215 455 aaPredicted RBP16.18■□□□□ 0.18
CASP4-210ENST00000531546 PLSCR2Q9NRY7 297 aa16.17■□□□□ 0.18
CASP4-210ENST00000531546 VASPP50552 380 aaPredicted RBP16.14■□□□□ 0.17
CASP4-210ENST00000531546 PYGBP11216 843 aa16.13■□□□□ 0.17
CASP4-210ENST00000531546 KLHL34Q8N239 644 aa16.12■□□□□ 0.17
CASP4-210ENST00000531546 PLCG2P16885 1265 aa16.08■□□□□ 0.16
CASP4-210ENST00000531546 GSE1Q14687 1217 aa16.08■□□□□ 0.16
CASP4-210ENST00000531546 FAM163AQ96GL9 167 aaPredicted RBP16.05■□□□□ 0.16
CASP4-210ENST00000531546 PCDH10Q9P2E7 1040 aa16.05■□□□□ 0.16
CASP4-210ENST00000531546 IRX5P78411 483 aaPredicted RBP16■□□□□ 0.15
CASP4-210ENST00000531546 PCDHB8Q9UN66 801 aa16■□□□□ 0.15
CASP4-210ENST00000531546 LCE2DQ5TA82 110 aaPredicted RBP15.99■□□□□ 0.15
CASP4-210ENST00000531546 ZNF467Q7Z7K2 595 aaPredicted RBP15.98■□□□□ 0.15
CASP4-210ENST00000531546 OCEL1Q9H607 264 aa15.95■□□□□ 0.14
CASP4-210ENST00000531546 SLAIN1Q8ND83 568 aa15.93■□□□□ 0.14
CASP4-210ENST00000531546 CHRM1P11229 460 aaPredicted RBP15.9■□□□□ 0.14
CASP4-210ENST00000531546 GOLGA2Q08379 1002 aa15.87■□□□□ 0.13
CASP4-210ENST00000531546 MKRN3Q13064 507 aaKnown RBP15.83■□□□□ 0.12
CASP4-210ENST00000531546 SPOCK2Q92563 424 aa15.83■□□□□ 0.12
CASP4-210ENST00000531546 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.8■□□□□ 0.12
CASP4-210ENST00000531546 PSEN1P49768 467 aa15.78■□□□□ 0.12
CASP4-210ENST00000531546 IFNLR1Q8IU57 520 aaPredicted RBP15.78■□□□□ 0.12
CASP4-210ENST00000531546 CIZ1Q9ULV3 898 aaPredicted RBP15.76■□□□□ 0.11
CASP4-210ENST00000531546 PDAP1Q13442 181 aaKnown RBP15.74■□□□□ 0.11
CASP4-210ENST00000531546 PDCD7Q8N8D1 485 aaKnown RBP15.74■□□□□ 0.11
CASP4-210ENST00000531546 ST18O60284 1047 aa15.73■□□□□ 0.11
CASP4-210ENST00000531546 SNPHO15079 494 aa15.72■□□□□ 0.11
CASP4-210ENST00000531546 L3MBTL3Q96JM7 780 aaPredicted RBP15.72■□□□□ 0.11
CASP4-210ENST00000531546 C3orf67Q6ZVT6 689 aa15.71■□□□□ 0.11
CASP4-210ENST00000531546 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.7■□□□□ 0.15e-8■■■■□ 20
CASP4-210ENST00000531546 CDAN1Q8IWY9 1227 aa15.67■□□□□ 0.1
CASP4-210ENST00000531546 TMEM121BQ9BXQ6 578 aaPredicted RBP15.67■□□□□ 0.1
CASP4-210ENST00000531546 TRIM41Q8WV44 630 aa15.62■□□□□ 0.09
CASP4-210ENST00000531546 CABP2Q9NPB3 220 aa15.6■□□□□ 0.09
CASP4-210ENST00000531546 ILDR1Q86SU0 546 aaPredicted RBP15.59■□□□□ 0.09
CASP4-210ENST00000531546 G3V3G9 751 aa15.54■□□□□ 0.08
CASP4-210ENST00000531546 BOLA1Q9Y3E2 137 aa15.48■□□□□ 0.07
CASP4-210ENST00000531546 DPY19L2Q6NUT2 758 aa15.45■□□□□ 0.06
CASP4-210ENST00000531546 MARVELD3Q96A59 401 aa15.45■□□□□ 0.06
CASP4-210ENST00000531546 EMP3P54852 163 aa15.41■□□□□ 0.06
CASP4-210ENST00000531546 EFCAB3Q8N7B9 438 aa15.37■□□□□ 0.05
CASP4-210ENST00000531546 RIOK3O14730 519 aaKnown RBP15.36■□□□□ 0.05
CASP4-210ENST00000531546 VGFO15240 615 aaPredicted RBP15.3■□□□□ 0.04
CASP4-210ENST00000531546 SOX12O15370 315 aa15.28■□□□□ 0.04
CASP4-210ENST00000531546 SPNS2Q8IVW8 549 aa15.28■□□□□ 0.04
CASP4-210ENST00000531546 HS3ST6Q96QI5 342 aa15.28■□□□□ 0.04
CASP4-210ENST00000531546 RNF25Q96BH1 459 aaPredicted RBP15.27■□□□□ 0.04
CASP4-210ENST00000531546 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.26■□□□□ 0.03
CASP4-210ENST00000531546 FAM205CA6NFA0 338 aa15.26■□□□□ 0.03
CASP4-210ENST00000531546 DOK7Q18PE1 504 aa15.26■□□□□ 0.03
CASP4-210ENST00000531546 ZNF710Q8N1W2 664 aa15.26■□□□□ 0.03
CASP4-210ENST00000531546 ZFP91Q96JP5 570 aaPredicted RBP15.26■□□□□ 0.03
CASP4-210ENST00000531546 MMRN1Q13201 1228 aa15.25■□□□□ 0.03
CASP4-210ENST00000531546 HOXB3P14651 431 aaPredicted RBP15.24■□□□□ 0.03
CASP4-210ENST00000531546 MICALL2Q8IY33 904 aa15.22■□□□□ 0.03
CASP4-210ENST00000531546 TAOK2Q9UL54 1235 aa15.22■□□□□ 0.03
CASP4-210ENST00000531546 RIMBP2O15034 1052 aa15.21■□□□□ 0.03
CASP4-210ENST00000531546 HOXB1P14653 301 aaPredicted RBP15.19■□□□□ 0.02
CASP4-210ENST00000531546 POTEB3A0JP26 581 aa15.16■□□□□ 0.02
CASP4-210ENST00000531546 POTEBQ6S5H4 581 aa15.16■□□□□ 0.02
CASP4-210ENST00000531546 KRTAP3-3Q9BYR6 98 aa15.15■□□□□ 0.02
CASP4-210ENST00000531546 KRTAP3-2Q9BYR7 98 aa15.15■□□□□ 0.02
CASP4-210ENST00000531546 PHF8Q9UPP1 1060 aa15.15■□□□□ 0.02
CASP4-210ENST00000531546 MS4A4AQ96JQ5 239 aa15.14■□□□□ 0.01
CASP4-210ENST00000531546 ZSWIM6Q9HCJ5 1215 aa15.1■□□□□ 0.01
CASP4-210ENST00000531546 ERBB3P21860 1342 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms