RNA–Protein interactions for RNA: ENST00000530330.1

SNX19-208, Transcript of sorting nexin 19, human

TSL 1 (best)

Gene SNX19, Length 880 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNX19-208	ENST00000530330	GSE1	Q14687	1217 aa		11.13	□□□□□ -0.63
SNX19-208	ENST00000530330	RNF39	Q9H2S5	420 aa		11.13	□□□□□ -0.63
SNX19-208	ENST00000530330	TMEM132A	Q24JP5	1023 aa		11.1	□□□□□ -0.63
SNX19-208	ENST00000530330	OSCAR	Q8IYS5	282 aa		11.08	□□□□□ -0.64
SNX19-208	ENST00000530330	RYDEN	Q9NUL5	291 aa	Known RBP	11.07	□□□□□ -0.64
SNX19-208	ENST00000530330	DAXX	Q9UER7	740 aa	Predicted RBP	11.06	□□□□□ -0.64
SNX19-208	ENST00000530330	RIOK3	O14730	519 aa	Known RBP	11.03	□□□□□ -0.64
SNX19-208	ENST00000530330	P3H3	Q8IVL6	736 aa		11.03	□□□□□ -0.64
SNX19-208	ENST00000530330	GTPBP6	O43824	516 aa	Predicted RBP	10.98	□□□□□ -0.65
SNX19-208	ENST00000530330	RNF25	Q96BH1	459 aa	Predicted RBP	10.98	□□□□□ -0.65
SNX19-208	ENST00000530330	STK25	O00506	426 aa		10.97	□□□□□ -0.65
SNX19-208	ENST00000530330	VGF	O15240	615 aa	Predicted RBP	10.96	□□□□□ -0.65
SNX19-208	ENST00000530330	C14orf37	Q86TY3	774 aa		10.96	□□□□□ -0.65
SNX19-208	ENST00000530330	NKX1-1	Q15270	411 aa	Predicted RBP	10.95	□□□□□ -0.66
SNX19-208	ENST00000530330	HOMEZ	Q8IX15	550 aa		10.95	□□□□□ -0.66
SNX19-208	ENST00000530330	DCAF8	Q5TAQ9	597 aa		10.93	□□□□□ -0.66
SNX19-208	ENST00000530330	FAM212A	Q96EL1	285 aa		10.9	□□□□□ -0.66
SNX19-208	ENST00000530330	DSG3	P32926	999 aa		10.89	□□□□□ -0.67
SNX19-208	ENST00000530330	NUBP1	P53384	320 aa		10.85	□□□□□ -0.67
SNX19-208	ENST00000530330	WDR70	Q9NW82	654 aa		10.85	□□□□□ -0.67
SNX19-208	ENST00000530330	SGIP1	Q9BQI5	828 aa		10.83	□□□□□ -0.68
SNX19-208	ENST00000530330	STK24	Q9Y6E0	443 aa		10.83	□□□□□ -0.68
SNX19-208	ENST00000530330	CHRM1	P11229	460 aa	Predicted RBP	10.81	□□□□□ -0.68
SNX19-208	ENST00000530330	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.81	□□□□□ -0.68
SNX19-208	ENST00000530330	LMOD2	Q6P5Q4	547 aa		10.8	□□□□□ -0.68
SNX19-208	ENST00000530330	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.76	□□□□□ -0.69
SNX19-208	ENST00000530330	ZFP91	Q96JP5	570 aa	Predicted RBP	10.76	□□□□□ -0.69
SNX19-208	ENST00000530330	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	10.74	□□□□□ -0.69
SNX19-208	ENST00000530330	SPDYE1	Q8NFV5	336 aa	Predicted RBP	10.71	□□□□□ -0.69
SNX19-208	ENST00000530330	KCNV2	Q8TDN2	545 aa		10.7	□□□□□ -0.7
SNX19-208	ENST00000530330	BRPF1	P55201	1214 aa	Predicted RBP	10.68	□□□□□ -0.7
SNX19-208	ENST00000530330	NEUROD2	Q15784	382 aa		10.64	□□□□□ -0.71
SNX19-208	ENST00000530330	ARHGEF1	Q92888	912 aa	Known RBP	10.63	□□□□□ -0.71
SNX19-208	ENST00000530330	PRR29	P0C7W0	189 aa		10.62	□□□□□ -0.71
SNX19-208	ENST00000530330	PYGB	P11216	843 aa		10.61	□□□□□ -0.71
SNX19-208	ENST00000530330	RASEF	Q8IZ41	740 aa		10.6	□□□□□ -0.71
SNX19-208	ENST00000530330	ZNF467	Q7Z7K2	595 aa	Predicted RBP	10.59	□□□□□ -0.71
SNX19-208	ENST00000530330	CREBZF	Q9NS37	354 aa		10.59	□□□□□ -0.71
SNX19-208	ENST00000530330	ZC3H15	Q8WU90	426 aa	Known RBP	10.58	□□□□□ -0.72
SNX19-208	ENST00000530330	MNX1	P50219	401 aa	Predicted RBP	10.56	□□□□□ -0.72
SNX19-208	ENST00000530330	CLEC11A	Q9Y240	323 aa		10.56	□□□□□ -0.72
SNX19-208	ENST00000530330	SMYD5	Q6GMV2	418 aa		10.55	□□□□□ -0.72
SNX19-208	ENST00000530330	CADPS2	Q86UW7	1296 aa		10.55	□□□□□ -0.72
SNX19-208	ENST00000530330	E2F4	Q16254	413 aa		10.53	□□□□□ -0.72
SNX19-208	ENST00000530330	SUPT5H	O00267	1087 aa	Known RBP	10.52	□□□□□ -0.73
SNX19-208	ENST00000530330	PDAP1	Q13442	181 aa	Known RBP	10.52	□□□□□ -0.73
SNX19-208	ENST00000530330	RBM42	Q9BTD8	480 aa	Known RBP	10.52	□□□□□ -0.73
SNX19-208	ENST00000530330	AKT1S1	Q96B36	256 aa		10.51	□□□□□ -0.73
SNX19-208	ENST00000530330	SLC24A3	Q9HC58	644 aa		10.5	□□□□□ -0.73
SNX19-208	ENST00000530330	TESPA1	A2RU30	521 aa	Predicted RBP	10.49	□□□□□ -0.73
SNX19-208	ENST00000530330	RANGAP1	P46060	587 aa	Predicted RBP	10.45	□□□□□ -0.74
SNX19-208	ENST00000530330	SEMA3E	O15041	775 aa		10.44	□□□□□ -0.74
SNX19-208	ENST00000530330	ZMYND10	O75800	440 aa		10.42	□□□□□ -0.74
SNX19-208	ENST00000530330	MFRP	Q9BY79	579 aa		10.42	□□□□□ -0.74
SNX19-208	ENST00000530330	PODXL2	Q9NZ53	605 aa		10.4	□□□□□ -0.74
SNX19-208	ENST00000530330	NLRP6	P59044	892 aa		10.39	□□□□□ -0.75
SNX19-208	ENST00000530330	PSEN1	P49768	467 aa		10.38	□□□□□ -0.75
SNX19-208	ENST00000530330	AK7	Q96M32	723 aa		10.36	□□□□□ -0.75
SNX19-208	ENST00000530330	BARGIN	Q6ZT62	677 aa		10.35	□□□□□ -0.75
SNX19-208	ENST00000530330	REM2	Q8IYK8	340 aa	Predicted RBP	10.35	□□□□□ -0.75
SNX19-208	ENST00000530330	ZNF579	Q8NAF0	562 aa	Known RBP	10.35	□□□□□ -0.75
SNX19-208	ENST00000530330	RSPH6A	Q9H0K4	717 aa		10.35	□□□□□ -0.75
SNX19-208	ENST00000530330	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.35	□□□□□ -0.75
SNX19-208	ENST00000530330	SOX12	O15370	315 aa		10.34	□□□□□ -0.75
SNX19-208	ENST00000530330	PCDHB8	Q9UN66	801 aa		10.33	□□□□□ -0.76
SNX19-208	ENST00000530330	PCDHB13	Q9Y5F0	798 aa		10.33	□□□□□ -0.76
SNX19-208	ENST00000530330	PDE4A	P27815	886 aa		10.32	□□□□□ -0.76
SNX19-208	ENST00000530330	ZMYND15	Q9H091	742 aa		10.32	□□□□□ -0.76
SNX19-208	ENST00000530330	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.32	□□□□□ -0.76
SNX19-208	ENST00000530330	KRI1	Q8N9T8	703 aa	Known RBP	10.31	□□□□□ -0.76
SNX19-208	ENST00000530330	GPIHBP1	Q8IV16	184 aa		10.29	□□□□□ -0.76
SNX19-208	ENST00000530330	LARP6	Q9BRS8	491 aa	Known RBP	10.29	□□□□□ -0.76
SNX19-208	ENST00000530330	PPP1R37	O75864	691 aa		10.28	□□□□□ -0.76
SNX19-208	ENST00000530330	NISCH	Q9Y2I1	1504 aa		10.28	□□□□□ -0.76
SNX19-208	ENST00000530330	FBXO22	Q8NEZ5	403 aa		10.27	□□□□□ -0.77
SNX19-208	ENST00000530330	DDX27	Q96GQ7	796 aa	Known RBP	10.27	□□□□□ -0.77
SNX19-208	ENST00000530330	MFSD10	Q14728	455 aa		10.25	□□□□□ -0.77
SNX19-208	ENST00000530330	EFCAB3	Q8N7B9	438 aa		10.25	□□□□□ -0.77
SNX19-208	ENST00000530330	UBTF	P17480	764 aa	Known RBP	10.24	□□□□□ -0.77
SNX19-208	ENST00000530330	IL27	Q8NEV9	243 aa		10.24	□□□□□ -0.77
SNX19-208	ENST00000530330	CABP2	Q9NPB3	220 aa		10.24	□□□□□ -0.77
SNX19-208	ENST00000530330	PAK3	O75914	559 aa	Predicted RBP	10.23	□□□□□ -0.77
SNX19-208	ENST00000530330	CACNB1	Q02641	598 aa	Predicted RBP	10.23	□□□□□ -0.77
SNX19-208	ENST00000530330	KDM4C	Q9H3R0	1056 aa		10.23	□□□□□ -0.77
SNX19-208	ENST00000530330	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.23	□□□□□ -0.77
SNX19-208	ENST00000530330	NCKAP5L	Q9HCH0	1330 aa		10.23	□□□□□ -0.77
SNX19-208	ENST00000530330	PHF8	Q9UPP1	1060 aa		10.22	□□□□□ -0.77
SNX19-208	ENST00000530330	PITPNM1	O00562	1244 aa		10.2	□□□□□ -0.78
SNX19-208	ENST00000530330	CCDC61	Q9Y6R9	512 aa		10.2	□□□□□ -0.78
SNX19-208	ENST00000530330	CAMK2B	Q13554	666 aa		10.19	□□□□□ -0.78
SNX19-208	ENST00000530330	CRISPLD2	Q9H0B8	497 aa		10.19	□□□□□ -0.78
SNX19-208	ENST00000530330	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.19	□□□□□ -0.78
SNX19-208	ENST00000530330	PDE4D	Q08499	809 aa		10.17	□□□□□ -0.78
SNX19-208	ENST00000530330	RBM26	Q5T8P6	1007 aa	Known RBP	10.17	□□□□□ -0.78
SNX19-208	ENST00000530330	TRIM66	O15016	1216 aa		10.15	□□□□□ -0.78
SNX19-208	ENST00000530330	GOLGA2	Q08379	1002 aa		10.15	□□□□□ -0.78
SNX19-208	ENST00000530330	FLII	Q13045	1269 aa		10.14	□□□□□ -0.79
SNX19-208	ENST00000530330	IFNL1	Q8IU54	200 aa		10.14	□□□□□ -0.79
SNX19-208	ENST00000530330	TRIM26	Q12899	539 aa	Predicted RBP	10.12	□□□□□ -0.79
SNX19-208	ENST00000530330	DDRGK1	Q96HY6	314 aa		10.12	□□□□□ -0.79

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