RNA–Protein interactions for RNA: ENST00000530085.2

RDX-208, Transcript of radixin, humanhuman

TSL 3

Gene RDX, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-208ENST00000530085 FAM163AQ96GL9 167 aaPredicted RBP10.36□□□□□ -0.75
RDX-208ENST00000530085 MNX1P50219 401 aaPredicted RBP10.33□□□□□ -0.76
RDX-208ENST00000530085 C7P10643 843 aa10.32□□□□□ -0.76
RDX-208ENST00000530085 MS4A3Q96HJ5 214 aa10.32□□□□□ -0.76
RDX-208ENST00000530085 SLC39A7Q92504 469 aa10.31□□□□□ -0.76
RDX-208ENST00000530085 POTEFA5A3E0 1075 aa10.29□□□□□ -0.76
RDX-208ENST00000530085 MAMSTRQ6ZN01 415 aa10.28□□□□□ -0.76
RDX-208ENST00000530085 AMER1Q5JTC6 1135 aaPredicted RBP10.27□□□□□ -0.77
RDX-208ENST00000530085 RTN4Q9NQC3 1192 aaKnown RBP10.27□□□□□ -0.77
RDX-208ENST00000530085 PAK3O75914 559 aaPredicted RBP10.25□□□□□ -0.77
RDX-208ENST00000530085 ATN1P54259 1190 aaPredicted RBP10.22□□□□□ -0.77
RDX-208ENST00000530085 CDAN1Q8IWY9 1227 aa10.2□□□□□ -0.78
RDX-208ENST00000530085 STAG3Q9UJ98 1225 aa10.2□□□□□ -0.78
RDX-208ENST00000530085 SCUBE2Q9NQ36 999 aa10.19□□□□□ -0.78
RDX-208ENST00000530085 TRPC6Q9Y210 931 aa10.14□□□□□ -0.79
RDX-208ENST00000530085 NPM1P06748 294 aaKnown RBP eCLIP10.13□□□□□ -0.79
RDX-208ENST00000530085 BMP2KQ9NSY1 1161 aaPredicted RBP10.12□□□□□ -0.79
RDX-208ENST00000530085 COLQQ9Y215 455 aaPredicted RBP10.1□□□□□ -0.79
RDX-208ENST00000530085 CCDC61Q9Y6R9 512 aa10.08□□□□□ -0.8
RDX-208ENST00000530085 KIF12Q96FN5 646 aa10.06□□□□□ -0.8
RDX-208ENST00000530085 MMRN1Q13201 1228 aa10.04□□□□□ -0.8
RDX-208ENST00000530085 ST18O60284 1047 aa10.03□□□□□ -0.8
RDX-208ENST00000530085 TSPYL2Q9H2G4 693 aaPredicted RBP10.03□□□□□ -0.8
RDX-208ENST00000530085 SPDYE4A6NLX3 237 aa10.01□□□□□ -0.81
RDX-208ENST00000530085 SPNS2Q8IVW8 549 aa10.01□□□□□ -0.81
RDX-208ENST00000530085 SLC24A1O60721 1099 aa9.98□□□□□ -0.81
RDX-208ENST00000530085 MAP3K13O43283 966 aa9.96□□□□□ -0.82
RDX-208ENST00000530085 TTLL13PA6NNM8 815 aa9.95□□□□□ -0.82
RDX-208ENST00000530085 TIE1P35590 1138 aa9.95□□□□□ -0.82
RDX-208ENST00000530085 FBXO3Q9UK99 471 aa9.95□□□□□ -0.82
RDX-208ENST00000530085 PROM2Q8N271 834 aa9.92□□□□□ -0.82
RDX-208ENST00000530085 SEC24BO95487 1268 aa9.9□□□□□ -0.82
RDX-208ENST00000530085 SLAIN1Q8ND83 568 aa9.9□□□□□ -0.82
RDX-208ENST00000530085 IER5LQ5T953 404 aa9.85□□□□□ -0.83
RDX-208ENST00000530085 TRIM35Q9UPQ4 493 aa9.85□□□□□ -0.83
RDX-208ENST00000530085 RASEFQ8IZ41 740 aa9.84□□□□□ -0.83
RDX-208ENST00000530085 MARVELD3Q96A59 401 aa9.8□□□□□ -0.84
RDX-208ENST00000530085 VASPP50552 380 aaPredicted RBP9.79□□□□□ -0.84
RDX-208ENST00000530085 TMEM121BQ9BXQ6 578 aaPredicted RBP9.78□□□□□ -0.84
RDX-208ENST00000530085 POTEB3A0JP26 581 aa9.75□□□□□ -0.85
RDX-208ENST00000530085 POTEBQ6S5H4 581 aa9.75□□□□□ -0.85
RDX-208ENST00000530085 IRX5P78411 483 aaPredicted RBP9.74□□□□□ -0.85
RDX-208ENST00000530085 KRTAP3-3Q9BYR6 98 aa9.74□□□□□ -0.85
RDX-208ENST00000530085 KRTAP3-2Q9BYR7 98 aa9.74□□□□□ -0.85
RDX-208ENST00000530085 IFNLR1Q8IU57 520 aaPredicted RBP9.72□□□□□ -0.85
RDX-208ENST00000530085 IFNL1Q8IU54 200 aa9.7□□□□□ -0.86
RDX-208ENST00000530085 SGIP1Q9BQI5 828 aa9.7□□□□□ -0.86
RDX-208ENST00000530085 PCDHB13Q9Y5F0 798 aa9.7□□□□□ -0.86
RDX-208ENST00000530085 PLCG2P16885 1265 aa9.67□□□□□ -0.86
RDX-208ENST00000530085 TMEM106CQ9BVX2 250 aa9.67□□□□□ -0.86
RDX-208ENST00000530085 SNPHO15079 494 aa9.62□□□□□ -0.87
RDX-208ENST00000530085 OCEL1Q9H607 264 aa9.6□□□□□ -0.87
RDX-208ENST00000530085 NUBP1P53384 320 aa9.59□□□□□ -0.87
RDX-208ENST00000530085 HS3ST6Q96QI5 342 aa9.59□□□□□ -0.87
RDX-208ENST00000530085 EMP3P54852 163 aa9.58□□□□□ -0.88
RDX-208ENST00000530085 MIER1Q8N108 512 aa9.57□□□□□ -0.88
RDX-208ENST00000530085 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.57□□□□□ -0.88
RDX-208ENST00000530085 PKD2Q13563 968 aa9.56□□□□□ -0.88
RDX-208ENST00000530085 FAM205CA6NFA0 338 aa9.54□□□□□ -0.88
RDX-208ENST00000530085 KLHL34Q8N239 644 aa9.53□□□□□ -0.88
RDX-208ENST00000530085 PDCD7Q8N8D1 485 aaKnown RBP9.51□□□□□ -0.89
RDX-208ENST00000530085 SPOCK2Q92563 424 aa9.51□□□□□ -0.89
RDX-208ENST00000530085 PLCB2Q00722 1185 aa9.49□□□□□ -0.89
RDX-208ENST00000530085 PLCD3Q8N3E9 789 aa9.48□□□□□ -0.89
RDX-208ENST00000530085 DCAF8L2P0C7V8 631 aa9.47□□□□□ -0.89
RDX-208ENST00000530085 PLEKHG5O94827 1062 aa9.45□□□□□ -0.9
RDX-208ENST00000530085 PCDHB8Q9UN66 801 aa9.41□□□□□ -0.9
RDX-208ENST00000530085 ECM2O94769 699 aaPredicted RBP9.4□□□□□ -0.9
RDX-208ENST00000530085 HOXB3P14651 431 aaPredicted RBP9.4□□□□□ -0.9
RDX-208ENST00000530085 C3orf67Q6ZVT6 689 aa9.39□□□□□ -0.91
RDX-208ENST00000530085 RNF166Q96A37 237 aaPredicted RBP9.38□□□□□ -0.91
RDX-208ENST00000530085 FAM212AQ96EL1 285 aa9.37□□□□□ -0.91
RDX-208ENST00000530085 PYGBP11216 843 aa9.36□□□□□ -0.91
RDX-208ENST00000530085 ZBTB47Q9UFB7 747 aaPredicted RBP9.34□□□□□ -0.91
RDX-208ENST00000530085 HAP1P54257 671 aaPredicted RBP9.33□□□□□ -0.92
RDX-208ENST00000530085 L3MBTL3Q96JM7 780 aaPredicted RBP9.32□□□□□ -0.92
RDX-208ENST00000530085 RGL2O15211 777 aa9.31□□□□□ -0.92
RDX-208ENST00000530085 HOXB1P14653 301 aaPredicted RBP9.31□□□□□ -0.92
RDX-208ENST00000530085 ILDR1Q86SU0 546 aaPredicted RBP9.31□□□□□ -0.92
RDX-208ENST00000530085 BBXQ8WY36 941 aaPredicted RBP9.31□□□□□ -0.92
RDX-208ENST00000530085 DPY19L2Q6NUT2 758 aa9.3□□□□□ -0.92
RDX-208ENST00000530085 MYT1LQ9UL68 1186 aa9.29□□□□□ -0.92
RDX-208ENST00000530085 CIZ1Q9ULV3 898 aaPredicted RBP9.29□□□□□ -0.92
RDX-208ENST00000530085 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.28□□□□□ -0.92
RDX-208ENST00000530085 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.26□□□□□ -0.933e-7■■■□□ 16.7
RDX-208ENST00000530085 VSIG10Q8N0Z9 540 aa9.24□□□□□ -0.93
RDX-208ENST00000530085 ERBB3P21860 1342 aa9.24□□□□□ -0.93
RDX-208ENST00000530085 DCAF8Q5TAQ9 597 aa9.23□□□□□ -0.93
RDX-208ENST00000530085 MKRN3Q13064 507 aaKnown RBP9.22□□□□□ -0.93
RDX-208ENST00000530085 VARS2Q5ST30 1063 aaKnown RBP9.21□□□□□ -0.94
RDX-208ENST00000530085 PAXIP1Q6ZW49 1069 aaPredicted RBP9.21□□□□□ -0.94
RDX-208ENST00000530085 TRIM41Q8WV44 630 aa9.21□□□□□ -0.94
RDX-208ENST00000530085 CFAP44Q96MT7 982 aa9.19□□□□□ -0.94
RDX-208ENST00000530085 GSE1Q14687 1217 aa9.18□□□□□ -0.94
RDX-208ENST00000530085 CHGAP10645 457 aaKnown RBP9.17□□□□□ -0.94
RDX-208ENST00000530085 ZNF710Q8N1W2 664 aa9.16□□□□□ -0.94
RDX-208ENST00000530085 SPRYD3Q8NCJ5 442 aa9.16□□□□□ -0.94
RDX-208ENST00000530085 ZNF687Q8N1G0 1237 aa9.15□□□□□ -0.94
RDX-208ENST00000530085 BOLA1Q9Y3E2 137 aa9.15□□□□□ -0.94
RDX-208ENST00000530085 PSEN1P49768 467 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms