RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 TSPYL2Q9H2G4 693 aaPredicted RBP11.98□□□□□ -0.49
AMBRA1-209ENST00000529963 PYGBP11216 843 aa11.91□□□□□ -0.5
AMBRA1-209ENST00000529963 TRIM41Q8WV44 630 aa11.87□□□□□ -0.51
AMBRA1-209ENST00000529963 RNF25Q96BH1 459 aaPredicted RBP11.87□□□□□ -0.51
AMBRA1-209ENST00000529963 CD44P16070 742 aaKnown RBP11.81□□□□□ -0.52
AMBRA1-209ENST00000529963 CCDC61Q9Y6R9 512 aa11.81□□□□□ -0.52
AMBRA1-209ENST00000529963 PAK3O75914 559 aaPredicted RBP11.81□□□□□ -0.52
AMBRA1-209ENST00000529963 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
AMBRA1-209ENST00000529963 CHRM1P11229 460 aaPredicted RBP11.79□□□□□ -0.52
AMBRA1-209ENST00000529963 RIOK3O14730 519 aaKnown RBP11.77□□□□□ -0.52
AMBRA1-209ENST00000529963 CHGAP10645 457 aaKnown RBP11.76□□□□□ -0.53
AMBRA1-209ENST00000529963 C19orf67A6NJJ6 358 aa11.73□□□□□ -0.53
AMBRA1-209ENST00000529963 PHF12Q96QT6 1004 aa11.73□□□□□ -0.53
AMBRA1-209ENST00000529963 PCDHB8Q9UN66 801 aa11.73□□□□□ -0.53
AMBRA1-209ENST00000529963 PCDHB13Q9Y5F0 798 aa11.73□□□□□ -0.53
AMBRA1-209ENST00000529963 MAP3K13O43283 966 aa11.7□□□□□ -0.54
AMBRA1-209ENST00000529963 HAX1O00165 279 aa11.7□□□□□ -0.54
AMBRA1-209ENST00000529963 KIF12Q96FN5 646 aa11.69□□□□□ -0.54
AMBRA1-209ENST00000529963 VGFO15240 615 aaPredicted RBP11.67□□□□□ -0.54
AMBRA1-209ENST00000529963 EVX2Q03828 476 aa11.67□□□□□ -0.54
AMBRA1-209ENST00000529963 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.66□□□□□ -0.54
AMBRA1-209ENST00000529963 ZFP91Q96JP5 570 aaPredicted RBP11.66□□□□□ -0.54
AMBRA1-209ENST00000529963 IFNL1Q8IU54 200 aa11.65□□□□□ -0.54
AMBRA1-209ENST00000529963 STK25O00506 426 aa11.65□□□□□ -0.55
AMBRA1-209ENST00000529963 BBXQ8WY36 941 aaPredicted RBP11.65□□□□□ -0.55
AMBRA1-209ENST00000529963 ZNF467Q7Z7K2 595 aaPredicted RBP11.64□□□□□ -0.55
AMBRA1-209ENST00000529963 HS6ST3Q8IZP7 471 aa11.64□□□□□ -0.55
AMBRA1-209ENST00000529963 TAOK2Q9UL54 1235 aa11.63□□□□□ -0.55
AMBRA1-209ENST00000529963 POTEHQ6S545 545 aa11.62□□□□□ -0.55
AMBRA1-209ENST00000529963 PLCB2Q00722 1185 aa11.61□□□□□ -0.55
AMBRA1-209ENST00000529963 ZNF579Q8NAF0 562 aaKnown RBP11.61□□□□□ -0.55
AMBRA1-209ENST00000529963 BCL11BQ9C0K0 894 aaPredicted RBP11.61□□□□□ -0.55
AMBRA1-209ENST00000529963 STK24Q9Y6E0 443 aa11.61□□□□□ -0.55
AMBRA1-209ENST00000529963 SLC24A1O60721 1099 aa11.6□□□□□ -0.55
AMBRA1-209ENST00000529963 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.59□□□□□ -0.55
AMBRA1-209ENST00000529963 PAXIP1Q6ZW49 1069 aaPredicted RBP11.58□□□□□ -0.56
AMBRA1-209ENST00000529963 CFAP44Q96MT7 982 aa11.58□□□□□ -0.56
AMBRA1-209ENST00000529963 PSEN1P49768 467 aa11.57□□□□□ -0.56
AMBRA1-209ENST00000529963 PDAP1Q13442 181 aaKnown RBP11.57□□□□□ -0.56
AMBRA1-209ENST00000529963 MS4A3Q96HJ5 214 aa11.57□□□□□ -0.56
AMBRA1-209ENST00000529963 SGIP1Q9BQI5 828 aa11.56□□□□□ -0.56
AMBRA1-209ENST00000529963 TRPC6Q9Y210 931 aa11.55□□□□□ -0.56
AMBRA1-209ENST00000529963 NKX1-1Q15270 411 aaPredicted RBP11.55□□□□□ -0.56
AMBRA1-209ENST00000529963 GALR2O43603 387 aaPredicted RBP11.5□□□□□ -0.57
AMBRA1-209ENST00000529963 HAP1P54257 671 aaPredicted RBP11.5□□□□□ -0.57
AMBRA1-209ENST00000529963 SPRYD3Q8NCJ5 442 aa11.5□□□□□ -0.57
AMBRA1-209ENST00000529963 DNAJC5Q9H3Z4 198 aa11.47□□□□□ -0.57
AMBRA1-209ENST00000529963 CABP2Q9NPB3 220 aa11.46□□□□□ -0.57
AMBRA1-209ENST00000529963 TMEM106CQ9BVX2 250 aa11.45□□□□□ -0.58
AMBRA1-209ENST00000529963 GTPBP6O43824 516 aaPredicted RBP11.43□□□□□ -0.58
AMBRA1-209ENST00000529963 EFCAB3Q8N7B9 438 aa11.43□□□□□ -0.58
AMBRA1-209ENST00000529963 GABBR2O75899 941 aa11.4□□□□□ -0.59
AMBRA1-209ENST00000529963 BMP2KQ9NSY1 1161 aaPredicted RBP11.4□□□□□ -0.59
AMBRA1-209ENST00000529963 TTLL13PA6NNM8 815 aa11.39□□□□□ -0.59
AMBRA1-209ENST00000529963 TSHZ2Q9NRE2 1034 aa11.39□□□□□ -0.59
AMBRA1-209ENST00000529963 TIE1P35590 1138 aa11.36□□□□□ -0.59
AMBRA1-209ENST00000529963 MFRPQ9BY79 579 aa11.36□□□□□ -0.59
AMBRA1-209ENST00000529963 GOLGA2Q08379 1002 aa11.35□□□□□ -0.59
AMBRA1-209ENST00000529963 PHF8Q9UPP1 1060 aa11.35□□□□□ -0.59
AMBRA1-209ENST00000529963 CLCN6P51797 869 aa11.32□□□□□ -0.6
AMBRA1-209ENST00000529963 TRIM35Q9UPQ4 493 aa11.32□□□□□ -0.6
AMBRA1-209ENST00000529963 ATN1P54259 1190 aaPredicted RBP11.31□□□□□ -0.6
AMBRA1-209ENST00000529963 MKRN3Q13064 507 aaKnown RBP11.3□□□□□ -0.6
AMBRA1-209ENST00000529963 SOX12O15370 315 aa11.29□□□□□ -0.6
AMBRA1-209ENST00000529963 FBXO22Q8NEZ5 403 aa11.29□□□□□ -0.6
AMBRA1-209ENST00000529963 ATMINO43313 823 aaPredicted RBP11.28□□□□□ -0.6
AMBRA1-209ENST00000529963 PPP1R37O75864 691 aa11.27□□□□□ -0.61
AMBRA1-209ENST00000529963 NLRP6P59044 892 aa11.27□□□□□ -0.61
AMBRA1-209ENST00000529963 SP7Q8TDD2 431 aaPredicted RBP11.27□□□□□ -0.61
AMBRA1-209ENST00000529963 RYDENQ9NUL5 291 aaKnown RBP11.27□□□□□ -0.61
AMBRA1-209ENST00000529963 KDM2AQ9Y2K7 1162 aa11.27□□□□□ -0.61
AMBRA1-209ENST00000529963 ABCC9O60706 1549 aa11.27□□□□□ -0.61
AMBRA1-209ENST00000529963 MS4A4AQ96JQ5 239 aa11.25□□□□□ -0.61
AMBRA1-209ENST00000529963 ASTLQ6HA08 431 aaPredicted RBP11.25□□□□□ -0.61
AMBRA1-209ENST00000529963 DCBLD2Q96PD2 775 aa11.25□□□□□ -0.61
AMBRA1-209ENST00000529963 PELP1Q8IZL8 1130 aaKnown RBP11.22□□□□□ -0.61
AMBRA1-209ENST00000529963 VSIG10Q8N0Z9 540 aa11.22□□□□□ -0.61
AMBRA1-209ENST00000529963 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.22□□□□□ -0.611e-6■□□□□ 9.5
AMBRA1-209ENST00000529963 POTEIP0CG38 1075 aa11.19□□□□□ -0.62
AMBRA1-209ENST00000529963 DPY19L2Q6NUT2 758 aa11.19□□□□□ -0.62
AMBRA1-209ENST00000529963 CADPS2Q86UW7 1296 aa11.18□□□□□ -0.62
AMBRA1-209ENST00000529963 CCDC180Q9P1Z9 1646 aa11.15□□□□□ -0.63
AMBRA1-209ENST00000529963 IRX5P78411 483 aaPredicted RBP11.14□□□□□ -0.63
AMBRA1-209ENST00000529963 ILDR1Q86SU0 546 aaPredicted RBP11.14□□□□□ -0.63
AMBRA1-209ENST00000529963 PDCD7Q8N8D1 485 aaKnown RBP11.12□□□□□ -0.63
AMBRA1-209ENST00000529963 IER5LQ5T953 404 aa11.1□□□□□ -0.63
AMBRA1-209ENST00000529963 COLQQ9Y215 455 aaPredicted RBP11.1□□□□□ -0.63
AMBRA1-209ENST00000529963 OCEL1Q9H607 264 aa11.09□□□□□ -0.63
AMBRA1-209ENST00000529963 PLCG2P16885 1265 aa11.09□□□□□ -0.63
AMBRA1-209ENST00000529963 SEC24BO95487 1268 aa11.08□□□□□ -0.64
AMBRA1-209ENST00000529963 POTEFA5A3E0 1075 aa11.06□□□□□ -0.64
AMBRA1-209ENST00000529963 METRNQ9UJH8 293 aa11.06□□□□□ -0.64
AMBRA1-209ENST00000529963 SLC39A7Q92504 469 aa11.05□□□□□ -0.64
AMBRA1-209ENST00000529963 C7P10643 843 aa11.03□□□□□ -0.64
AMBRA1-209ENST00000529963 MICALL2Q8IY33 904 aa11.02□□□□□ -0.65
AMBRA1-209ENST00000529963 NCKAP5LQ9HCH0 1330 aa11.01□□□□□ -0.65
AMBRA1-209ENST00000529963 BOLA1Q9Y3E2 137 aa11□□□□□ -0.65
AMBRA1-209ENST00000529963 WDR70Q9NW82 654 aa10.98□□□□□ -0.65
AMBRA1-209ENST00000529963 LARP6Q9BRS8 491 aaKnown RBP10.97□□□□□ -0.65
AMBRA1-209ENST00000529963 G3V3G9 751 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms