RNA–Protein interactions for RNA: ENST00000529848.1

SVIP-203, Transcript of small VCP interacting protein, humanhuman

TSL 5

Gene SVIP, Length 263 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-203ENST00000529848 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.56□□□□□ -0.88
SVIP-203ENST00000529848 NPM1P06748 294 aaKnown RBP eCLIP9.55□□□□□ -0.88
SVIP-203ENST00000529848 BBXQ8WY36 941 aaPredicted RBP9.55□□□□□ -0.88
SVIP-203ENST00000529848 HAP1P54257 671 aaPredicted RBP9.54□□□□□ -0.88
SVIP-203ENST00000529848 CHGAP10645 457 aaKnown RBP9.5□□□□□ -0.89
SVIP-203ENST00000529848 FARP1Q9Y4F1 1045 aaPredicted RBP9.5□□□□□ -0.89
SVIP-203ENST00000529848 RASEFQ8IZ41 740 aa9.48□□□□□ -0.89
SVIP-203ENST00000529848 TAOK2Q9UL54 1235 aa9.48□□□□□ -0.89
SVIP-203ENST00000529848 PAXIP1Q6ZW49 1069 aaPredicted RBP9.46□□□□□ -0.9
SVIP-203ENST00000529848 CFAP44Q96MT7 982 aa9.46□□□□□ -0.9
SVIP-203ENST00000529848 RNF25Q96BH1 459 aaPredicted RBP9.45□□□□□ -0.9
SVIP-203ENST00000529848 RIOK3O14730 519 aaKnown RBP9.44□□□□□ -0.9
SVIP-203ENST00000529848 CHRM1P11229 460 aaPredicted RBP9.42□□□□□ -0.9
SVIP-203ENST00000529848 EVX2Q03828 476 aa9.42□□□□□ -0.9
SVIP-203ENST00000529848 HS6ST3Q8IZP7 471 aa9.42□□□□□ -0.9
SVIP-203ENST00000529848 SPRYD3Q8NCJ5 442 aa9.42□□□□□ -0.9
SVIP-203ENST00000529848 PYGBP11216 843 aa9.4□□□□□ -0.9
SVIP-203ENST00000529848 VGFO15240 615 aaPredicted RBP9.39□□□□□ -0.91
SVIP-203ENST00000529848 TSPYL2Q9H2G4 693 aaPredicted RBP9.38□□□□□ -0.91
SVIP-203ENST00000529848 HAX1O00165 279 aa9.37□□□□□ -0.91
SVIP-203ENST00000529848 C19orf67A6NJJ6 358 aa9.36□□□□□ -0.91
SVIP-203ENST00000529848 VSIG10Q8N0Z9 540 aa9.36□□□□□ -0.91
SVIP-203ENST00000529848 STK25O00506 426 aa9.35□□□□□ -0.91
SVIP-203ENST00000529848 PAK3O75914 559 aaPredicted RBP9.32□□□□□ -0.92
SVIP-203ENST00000529848 CD44P16070 742 aaKnown RBP9.32□□□□□ -0.92
SVIP-203ENST00000529848 DNAJC5Q9H3Z4 198 aa9.32□□□□□ -0.92
SVIP-203ENST00000529848 SGIP1Q9BQI5 828 aa9.31□□□□□ -0.92
SVIP-203ENST00000529848 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.3□□□□□ -0.92
SVIP-203ENST00000529848 ZNF467Q7Z7K2 595 aaPredicted RBP9.3□□□□□ -0.92
SVIP-203ENST00000529848 ZFP91Q96JP5 570 aaPredicted RBP9.3□□□□□ -0.92
SVIP-203ENST00000529848 STK24Q9Y6E0 443 aa9.3□□□□□ -0.92
SVIP-203ENST00000529848 BCL11BQ9C0K0 894 aaPredicted RBP9.28□□□□□ -0.92
SVIP-203ENST00000529848 TSHZ2Q9NRE2 1034 aa9.26□□□□□ -0.93
SVIP-203ENST00000529848 ZRANB1Q9UGI0 708 aa9.26□□□□□ -0.93
SVIP-203ENST00000529848 CCDC61Q9Y6R9 512 aa9.26□□□□□ -0.93
SVIP-203ENST00000529848 NKX1-1Q15270 411 aaPredicted RBP9.24□□□□□ -0.93
SVIP-203ENST00000529848 PDAP1Q13442 181 aaKnown RBP9.22□□□□□ -0.93
SVIP-203ENST00000529848 PHF12Q96QT6 1004 aa9.22□□□□□ -0.93
SVIP-203ENST00000529848 RYDENQ9NUL5 291 aaKnown RBP9.22□□□□□ -0.93
SVIP-203ENST00000529848 KDM2AQ9Y2K7 1162 aa9.22□□□□□ -0.93
SVIP-203ENST00000529848 ZNF579Q8NAF0 562 aaKnown RBP9.21□□□□□ -0.94
SVIP-203ENST00000529848 PCDHB8Q9UN66 801 aa9.21□□□□□ -0.94
SVIP-203ENST00000529848 PCDHB13Q9Y5F0 798 aa9.21□□□□□ -0.94
SVIP-203ENST00000529848 GTPBP6O43824 516 aaPredicted RBP9.2□□□□□ -0.94
SVIP-203ENST00000529848 BCANQ96GW7 911 aa9.2□□□□□ -0.94
SVIP-203ENST00000529848 SP7Q8TDD2 431 aaPredicted RBP9.18□□□□□ -0.94
SVIP-203ENST00000529848 PSEN1P49768 467 aa9.17□□□□□ -0.94
SVIP-203ENST00000529848 MAP3K13O43283 966 aa9.15□□□□□ -0.94
SVIP-203ENST00000529848 KIF12Q96FN5 646 aa9.15□□□□□ -0.94
SVIP-203ENST00000529848 GABBR2O75899 941 aa9.14□□□□□ -0.95
SVIP-203ENST00000529848 IFNL1Q8IU54 200 aa9.14□□□□□ -0.95
SVIP-203ENST00000529848 GALR2O43603 387 aaPredicted RBP9.11□□□□□ -0.95
SVIP-203ENST00000529848 MS4A3Q96HJ5 214 aa9.09□□□□□ -0.95
SVIP-203ENST00000529848 TRPC6Q9Y210 931 aa9.08□□□□□ -0.96
SVIP-203ENST00000529848 CABP2Q9NPB3 220 aa9.06□□□□□ -0.96
SVIP-203ENST00000529848 EFCAB3Q8N7B9 438 aa9.04□□□□□ -0.96
SVIP-203ENST00000529848 MFRPQ9BY79 579 aa9.04□□□□□ -0.96
SVIP-203ENST00000529848 SOX12O15370 315 aa9.02□□□□□ -0.97
SVIP-203ENST00000529848 POTEIP0CG38 1075 aa9.02□□□□□ -0.97
SVIP-203ENST00000529848 NLRP6P59044 892 aa9.02□□□□□ -0.97
SVIP-203ENST00000529848 GOLGA2Q08379 1002 aa9.01□□□□□ -0.97
SVIP-203ENST00000529848 NBR1Q14596 966 aa9.01□□□□□ -0.97
SVIP-203ENST00000529848 TMEM106CQ9BVX2 250 aa8.99□□□□□ -0.97
SVIP-203ENST00000529848 CLCN6P51797 869 aa8.98□□□□□ -0.97
SVIP-203ENST00000529848 PHF8Q9UPP1 1060 aa8.98□□□□□ -0.97
SVIP-203ENST00000529848 WDR70Q9NW82 654 aa8.97□□□□□ -0.97
SVIP-203ENST00000529848 FBXO22Q8NEZ5 403 aa8.96□□□□□ -0.98
SVIP-203ENST00000529848 MKRN3Q13064 507 aaKnown RBP8.94□□□□□ -0.98
SVIP-203ENST00000529848 CADPS2Q86UW7 1296 aa8.94□□□□□ -0.98
SVIP-203ENST00000529848 PELP1Q8IZL8 1130 aaKnown RBP8.94□□□□□ -0.98
SVIP-203ENST00000529848 BMP2KQ9NSY1 1161 aaPredicted RBP8.94□□□□□ -0.98
SVIP-203ENST00000529848 PPP1R37O75864 691 aa8.93□□□□□ -0.98
SVIP-203ENST00000529848 TIE1P35590 1138 aa8.93□□□□□ -0.98
SVIP-203ENST00000529848 P3H3Q8IVL6 736 aa8.93□□□□□ -0.98
SVIP-203ENST00000529848 ATMINO43313 823 aaPredicted RBP8.92□□□□□ -0.98
SVIP-203ENST00000529848 TTLL13PA6NNM8 815 aa8.91□□□□□ -0.98
SVIP-203ENST00000529848 ATN1P54259 1190 aaPredicted RBP8.91□□□□□ -0.98
SVIP-203ENST00000529848 ASTLQ6HA08 431 aaPredicted RBP8.91□□□□□ -0.98
SVIP-203ENST00000529848 DCBLD2Q96PD2 775 aa8.91□□□□□ -0.98
SVIP-203ENST00000529848 TPRNQ4KMQ1 711 aa8.88□□□□□ -0.99
SVIP-203ENST00000529848 PRKCSHP14314 528 aaPredicted RBP8.87□□□□□ -0.99
SVIP-203ENST00000529848 MS4A4AQ96JQ5 239 aa8.87□□□□□ -0.99
SVIP-203ENST00000529848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.84□□□□□ -0.99
SVIP-203ENST00000529848 TRIM35Q9UPQ4 493 aa8.84□□□□□ -0.99
SVIP-203ENST00000529848 KCNV2Q8TDN2 545 aa8.83□□□□□ -1
SVIP-203ENST00000529848 PDE4AP27815 886 aa8.82□□□□□ -1
SVIP-203ENST00000529848 POTEFA5A3E0 1075 aa8.8□□□□□ -1
SVIP-203ENST00000529848 E2F4Q16254 413 aa8.79□□□□□ -1
SVIP-203ENST00000529848 LARP6Q9BRS8 491 aaKnown RBP8.79□□□□□ -1
SVIP-203ENST00000529848 NCKAP5LQ9HCH0 1330 aa8.78□□□□□ -1
SVIP-203ENST00000529848 ILDR1Q86SU0 546 aaPredicted RBP8.77□□□□□ -1.01
SVIP-203ENST00000529848 COLQQ9Y215 455 aaPredicted RBP8.77□□□□□ -1.01
SVIP-203ENST00000529848 DDX27Q96GQ7 796 aaKnown RBP8.76□□□□□ -1.01
SVIP-203ENST00000529848 CRISPLD2Q9H0B8 497 aa8.76□□□□□ -1.01
SVIP-203ENST00000529848 METRNQ9UJH8 293 aa8.76□□□□□ -1.01
SVIP-203ENST00000529848 POTEB2H3BUK9 544 aa8.75□□□□□ -1.01
SVIP-203ENST00000529848 ARHGEF1Q92888 912 aaKnown RBP8.75□□□□□ -1.01
SVIP-203ENST00000529848 MFSD10Q14728 455 aa8.74□□□□□ -1.01
SVIP-203ENST00000529848 SLC39A7Q92504 469 aa8.74□□□□□ -1.01
SVIP-203ENST00000529848 G3V3G9 751 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 229.9 ms