RNA–Protein interactions for RNA: ENST00000529588.5

ATM-214, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5

Gene ATM, Length 502 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-214ENST00000529588 MS4A3Q96HJ5 214 aa13.66□□□□□ -0.22
ATM-214ENST00000529588 C7P10643 843 aa13.64□□□□□ -0.23
ATM-214ENST00000529588 ATMINO43313 823 aaPredicted RBP13.63□□□□□ -0.23
ATM-214ENST00000529588 PCDH10Q9P2E7 1040 aa13.62□□□□□ -0.23
ATM-214ENST00000529588 MAMSTRQ6ZN01 415 aa13.61□□□□□ -0.23
ATM-214ENST00000529588 POTEJP0CG39 1038 aa13.56□□□□□ -0.24
ATM-214ENST00000529588 TSPYL2Q9H2G4 693 aaPredicted RBP13.5□□□□□ -0.25
ATM-214ENST00000529588 SCUBE2Q9NQ36 999 aa13.49□□□□□ -0.25
ATM-214ENST00000529588 ATN1P54259 1190 aaPredicted RBP13.48□□□□□ -0.25
ATM-214ENST00000529588 CCDC61Q9Y6R9 512 aa13.47□□□□□ -0.25
ATM-214ENST00000529588 LCE2DQ5TA82 110 aaPredicted RBP13.43□□□□□ -0.26
ATM-214ENST00000529588 KIF12Q96FN5 646 aa13.42□□□□□ -0.26
ATM-214ENST00000529588 FAM163AQ96GL9 167 aaPredicted RBP13.42□□□□□ -0.26
ATM-214ENST00000529588 PROM2Q8N271 834 aa13.38□□□□□ -0.27
ATM-214ENST00000529588 EHMT2Q96KQ7 1210 aa13.38□□□□□ -0.27
ATM-214ENST00000529588 BMP2KQ9NSY1 1161 aaPredicted RBP13.38□□□□□ -0.27
ATM-214ENST00000529588 POTEFA5A3E0 1075 aa13.36□□□□□ -0.27
ATM-214ENST00000529588 TIE1P35590 1138 aa13.35□□□□□ -0.27
ATM-214ENST00000529588 TRPC6Q9Y210 931 aa13.32□□□□□ -0.28
ATM-214ENST00000529588 MAP3K13O43283 966 aa13.31□□□□□ -0.28
ATM-214ENST00000529588 PLEKHG5O94827 1062 aa13.31□□□□□ -0.28
ATM-214ENST00000529588 SEC24BO95487 1268 aa13.25□□□□□ -0.29
ATM-214ENST00000529588 TTLL13PA6NNM8 815 aa13.24□□□□□ -0.29
ATM-214ENST00000529588 RASEFQ8IZ41 740 aa13.24□□□□□ -0.29
ATM-214ENST00000529588 MIER1Q8N108 512 aa13.22□□□□□ -0.29
ATM-214ENST00000529588 COLQQ9Y215 455 aaPredicted RBP13.22□□□□□ -0.29
ATM-214ENST00000529588 IER5LQ5T953 404 aa13.2□□□□□ -0.3
ATM-214ENST00000529588 SGIP1Q9BQI5 828 aa13.17□□□□□ -0.3
ATM-214ENST00000529588 CDAN1Q8IWY9 1227 aa13.16□□□□□ -0.3
ATM-214ENST00000529588 TRIM35Q9UPQ4 493 aa13.16□□□□□ -0.3
ATM-214ENST00000529588 PCDHB13Q9Y5F0 798 aa13.13□□□□□ -0.31
ATM-214ENST00000529588 SLAIN1Q8ND83 568 aa13.08□□□□□ -0.32
ATM-214ENST00000529588 PLCD3Q8N3E9 789 aa13.06□□□□□ -0.32
ATM-214ENST00000529588 ZBTB47Q9UFB7 747 aaPredicted RBP13.05□□□□□ -0.32
ATM-214ENST00000529588 ST18O60284 1047 aa13.04□□□□□ -0.32
ATM-214ENST00000529588 IFNL1Q8IU54 200 aa13.02□□□□□ -0.33
ATM-214ENST00000529588 PLCG2P16885 1265 aa13.01□□□□□ -0.33
ATM-214ENST00000529588 NUBP1P53384 320 aa13□□□□□ -0.33
ATM-214ENST00000529588 TMEM106CQ9BVX2 250 aa13□□□□□ -0.33
ATM-214ENST00000529588 FAM212AQ96EL1 285 aa12.96□□□□□ -0.33
ATM-214ENST00000529588 IRX5P78411 483 aaPredicted RBP12.94□□□□□ -0.34
ATM-214ENST00000529588 TMEM121BQ9BXQ6 578 aaPredicted RBP12.92□□□□□ -0.34
ATM-214ENST00000529588 SNPHO15079 494 aa12.88□□□□□ -0.35
ATM-214ENST00000529588 OCEL1Q9H607 264 aa12.88□□□□□ -0.35
ATM-214ENST00000529588 MMRN1Q13201 1228 aa12.86□□□□□ -0.35
ATM-214ENST00000529588 SPNS2Q8IVW8 549 aa12.85□□□□□ -0.35
ATM-214ENST00000529588 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.84□□□□□ -0.35
ATM-214ENST00000529588 DCAF8Q5TAQ9 597 aa12.77□□□□□ -0.37
ATM-214ENST00000529588 PYGBP11216 843 aa12.76□□□□□ -0.37
ATM-214ENST00000529588 MARVELD3Q96A59 401 aa12.76□□□□□ -0.37
ATM-214ENST00000529588 PCDHB8Q9UN66 801 aa12.72□□□□□ -0.37
ATM-214ENST00000529588 C3orf67Q6ZVT6 689 aa12.68□□□□□ -0.38
ATM-214ENST00000529588 EMP3P54852 163 aa12.67□□□□□ -0.38
ATM-214ENST00000529588 PDCD7Q8N8D1 485 aaKnown RBP12.67□□□□□ -0.38
ATM-214ENST00000529588 L3MBTL3Q96JM7 780 aaPredicted RBP12.65□□□□□ -0.38
ATM-214ENST00000529588 GOLGA2Q08379 1002 aa12.63□□□□□ -0.39
ATM-214ENST00000529588 MKRN3Q13064 507 aaKnown RBP12.62□□□□□ -0.39
ATM-214ENST00000529588 ZNF467Q7Z7K2 595 aaPredicted RBP12.62□□□□□ -0.39
ATM-214ENST00000529588 FKBP8Q14318 412 aa12.59□□□□□ -0.39
ATM-214ENST00000529588 HS3ST6Q96QI5 342 aa12.58□□□□□ -0.4
ATM-214ENST00000529588 KRTAP3-3Q9BYR6 98 aa12.57□□□□□ -0.4
ATM-214ENST00000529588 KRTAP3-2Q9BYR7 98 aa12.57□□□□□ -0.4
ATM-214ENST00000529588 GSE1Q14687 1217 aa12.56□□□□□ -0.4
ATM-214ENST00000529588 FAM205CA6NFA0 338 aa12.55□□□□□ -0.4
ATM-214ENST00000529588 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.55□□□□□ -0.42e-7■■■■■ 27.8
ATM-214ENST00000529588 FBXO3Q9UK99 471 aa12.54□□□□□ -0.4
ATM-214ENST00000529588 POTEB3A0JP26 581 aa12.53□□□□□ -0.4
ATM-214ENST00000529588 POTEBQ6S5H4 581 aa12.53□□□□□ -0.4
ATM-214ENST00000529588 CHRM1P11229 460 aaPredicted RBP12.49□□□□□ -0.41
ATM-214ENST00000529588 PSEN1P49768 467 aa12.49□□□□□ -0.41
ATM-214ENST00000529588 ILDR1Q86SU0 546 aaPredicted RBP12.47□□□□□ -0.41
ATM-214ENST00000529588 KLHL34Q8N239 644 aa12.45□□□□□ -0.42
ATM-214ENST00000529588 G3V3G9 751 aa12.42□□□□□ -0.42
ATM-214ENST00000529588 PDAP1Q13442 181 aaKnown RBP12.4□□□□□ -0.42
ATM-214ENST00000529588 DPY19L2Q6NUT2 758 aa12.39□□□□□ -0.43
ATM-214ENST00000529588 HOXB3P14651 431 aaPredicted RBP12.38□□□□□ -0.43
ATM-214ENST00000529588 BOLA1Q9Y3E2 137 aa12.38□□□□□ -0.43
ATM-214ENST00000529588 ZNF710Q8N1W2 664 aa12.37□□□□□ -0.43
ATM-214ENST00000529588 HOXB1P14653 301 aaPredicted RBP12.36□□□□□ -0.43
ATM-214ENST00000529588 VASPP50552 380 aaPredicted RBP12.36□□□□□ -0.43
ATM-214ENST00000529588 CABP2Q9NPB3 220 aa12.34□□□□□ -0.43
ATM-214ENST00000529588 DOK7Q18PE1 504 aa12.33□□□□□ -0.44
ATM-214ENST00000529588 ERBB3P21860 1342 aa12.32□□□□□ -0.44
ATM-214ENST00000529588 RNF166Q96A37 237 aaPredicted RBP12.3□□□□□ -0.44
ATM-214ENST00000529588 RIMBP2O15034 1052 aa12.27□□□□□ -0.45
ATM-214ENST00000529588 VARS2Q5ST30 1063 aaKnown RBP12.22□□□□□ -0.45
ATM-214ENST00000529588 MYT1LQ9UL68 1186 aa12.22□□□□□ -0.45
ATM-214ENST00000529588 CIZ1Q9ULV3 898 aaPredicted RBP12.2□□□□□ -0.46
ATM-214ENST00000529588 SPOCK2Q92563 424 aa12.18□□□□□ -0.46
ATM-214ENST00000529588 ZSWIM6Q9HCJ5 1215 aa12.18□□□□□ -0.46
ATM-214ENST00000529588 ZNF687Q8N1G0 1237 aa12.16□□□□□ -0.46
ATM-214ENST00000529588 PTGER2P43116 358 aa12.14□□□□□ -0.47
ATM-214ENST00000529588 EFCAB3Q8N7B9 438 aa12.13□□□□□ -0.47
ATM-214ENST00000529588 MICALL2Q8IY33 904 aa12.1□□□□□ -0.47
ATM-214ENST00000529588 GPR153Q6NV75 609 aa12.09□□□□□ -0.47
ATM-214ENST00000529588 TMEM92Q6UXU6 159 aa12.09□□□□□ -0.47
ATM-214ENST00000529588 IFNLR1Q8IU57 520 aaPredicted RBP12.08□□□□□ -0.48
ATM-214ENST00000529588 TRIM41Q8WV44 630 aa12.05□□□□□ -0.48
ATM-214ENST00000529588 SOX12O15370 315 aa12.01□□□□□ -0.49
ATM-214ENST00000529588 ANKRD13DQ6ZTN6 518 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms