RNA–Protein interactions for RNA: ENST00000529045.1

PTPN22-208, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 4

Gene PTPN22, Length 527 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-208ENST00000529045 CREBZFQ9NS37 354 aa12.86□□□□□ -0.35
PTPN22-208ENST00000529045 DCAF8L2P0C7V8 631 aa12.82□□□□□ -0.36
PTPN22-208ENST00000529045 PLCB2Q00722 1185 aa12.82□□□□□ -0.36
PTPN22-208ENST00000529045 CD44P16070 742 aaKnown RBP12.78□□□□□ -0.36
PTPN22-208ENST00000529045 CUX2O14529 1486 aa12.78□□□□□ -0.36
PTPN22-208ENST00000529045 SPOCK2Q92563 424 aa12.77□□□□□ -0.37
PTPN22-208ENST00000529045 KLHL34Q8N239 644 aa12.74□□□□□ -0.37
PTPN22-208ENST00000529045 GABBR2O75899 941 aa12.73□□□□□ -0.37
PTPN22-208ENST00000529045 DCAF1Q9Y4B6 1507 aa12.69□□□□□ -0.38
PTPN22-208ENST00000529045 PLCD3Q8N3E9 789 aa12.68□□□□□ -0.38
PTPN22-208ENST00000529045 MNX1P50219 401 aaPredicted RBP12.66□□□□□ -0.38
PTPN22-208ENST00000529045 ECM2O94769 699 aaPredicted RBP12.64□□□□□ -0.39
PTPN22-208ENST00000529045 MIER1Q8N108 512 aa12.64□□□□□ -0.39
PTPN22-208ENST00000529045 ZRANB1Q9UGI0 708 aa12.64□□□□□ -0.39
PTPN22-208ENST00000529045 SCRIBQ14160 1630 aa12.61□□□□□ -0.39
PTPN22-208ENST00000529045 NPM1P06748 294 aaKnown RBP eCLIP12.59□□□□□ -0.39
PTPN22-208ENST00000529045 RGL2O15211 777 aa12.58□□□□□ -0.4
PTPN22-208ENST00000529045 HAP1P54257 671 aaPredicted RBP12.58□□□□□ -0.4
PTPN22-208ENST00000529045 ZNF579Q8NAF0 562 aaKnown RBP12.56□□□□□ -0.4
PTPN22-208ENST00000529045 ZCCHC6Q5VYS8 1495 aaKnown RBP12.55□□□□□ -0.4
PTPN22-208ENST00000529045 PAK3O75914 559 aaPredicted RBP12.52□□□□□ -0.41
PTPN22-208ENST00000529045 ERCC6Q03468 1493 aa12.51□□□□□ -0.41
PTPN22-208ENST00000529045 BBXQ8WY36 941 aaPredicted RBP12.5□□□□□ -0.41
PTPN22-208ENST00000529045 PHF12Q96QT6 1004 aa12.5□□□□□ -0.41
PTPN22-208ENST00000529045 POTEIP0CG38 1075 aa12.48□□□□□ -0.41
PTPN22-208ENST00000529045 CLCN6P51797 869 aa12.47□□□□□ -0.41
PTPN22-208ENST00000529045 ZBTB47Q9UFB7 747 aaPredicted RBP12.46□□□□□ -0.41
PTPN22-208ENST00000529045 GALR2O43603 387 aaPredicted RBP12.45□□□□□ -0.42
PTPN22-208ENST00000529045 PLEKHG5O94827 1062 aa12.45□□□□□ -0.42
PTPN22-208ENST00000529045 CIZ1Q9ULV3 898 aaPredicted RBP12.45□□□□□ -0.42
PTPN22-208ENST00000529045 TSPYL2Q9H2G4 693 aaPredicted RBP12.44□□□□□ -0.42
PTPN22-208ENST00000529045 DCBLD2Q96PD2 775 aa12.41□□□□□ -0.42
PTPN22-208ENST00000529045 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.41□□□□□ -0.42
PTPN22-208ENST00000529045 VSIG10Q8N0Z9 540 aa12.4□□□□□ -0.42
PTPN22-208ENST00000529045 PAXIP1Q6ZW49 1069 aaPredicted RBP12.39□□□□□ -0.43
PTPN22-208ENST00000529045 NUBP1P53384 320 aa12.37□□□□□ -0.43
PTPN22-208ENST00000529045 RASEFQ8IZ41 740 aa12.36□□□□□ -0.43
PTPN22-208ENST00000529045 KDM2AQ9Y2K7 1162 aa12.36□□□□□ -0.43
PTPN22-208ENST00000529045 RNF25Q96BH1 459 aaPredicted RBP12.35□□□□□ -0.43
PTPN22-208ENST00000529045 CFAP44Q96MT7 982 aa12.35□□□□□ -0.43
PTPN22-208ENST00000529045 CCDC61Q9Y6R9 512 aa12.34□□□□□ -0.43
PTPN22-208ENST00000529045 TRIM41Q8WV44 630 aa12.33□□□□□ -0.44
PTPN22-208ENST00000529045 CHGAP10645 457 aaKnown RBP12.32□□□□□ -0.44
PTPN22-208ENST00000529045 MS4A3Q96HJ5 214 aa12.32□□□□□ -0.44
PTPN22-208ENST00000529045 LHX8Q68G74 356 aa12.31□□□□□ -0.44
PTPN22-208ENST00000529045 THOC2Q8NI27 1593 aaKnown RBP12.3□□□□□ -0.44
PTPN22-208ENST00000529045 NCAPD3P42695 1498 aa12.3□□□□□ -0.44
PTPN22-208ENST00000529045 GSE1Q14687 1217 aa12.28□□□□□ -0.44
PTPN22-208ENST00000529045 HS6ST3Q8IZP7 471 aa12.27□□□□□ -0.45
PTPN22-208ENST00000529045 SPRYD3Q8NCJ5 442 aa12.27□□□□□ -0.45
PTPN22-208ENST00000529045 BCANQ96GW7 911 aa12.26□□□□□ -0.45
PTPN22-208ENST00000529045 KIF12Q96FN5 646 aa12.25□□□□□ -0.45
PTPN22-208ENST00000529045 TSHZ2Q9NRE2 1034 aa12.25□□□□□ -0.45
PTPN22-208ENST00000529045 HMGXB3Q12766 1538 aa12.24□□□□□ -0.45
PTPN22-208ENST00000529045 MAP3K13O43283 966 aa12.21□□□□□ -0.45
PTPN22-208ENST00000529045 PELP1Q8IZL8 1130 aaKnown RBP12.21□□□□□ -0.45
PTPN22-208ENST00000529045 DCAF8Q5TAQ9 597 aa12.2□□□□□ -0.46
PTPN22-208ENST00000529045 SMARCA2P51531 1590 aa12.18□□□□□ -0.46
PTPN22-208ENST00000529045 LAMC3Q9Y6N6 1575 aa12.18□□□□□ -0.46
PTPN22-208ENST00000529045 HRCP23327 699 aa12.18□□□□□ -0.46
PTPN22-208ENST00000529045 RIOK3O14730 519 aaKnown RBP12.17□□□□□ -0.46
PTPN22-208ENST00000529045 TRPC6Q9Y210 931 aa12.17□□□□□ -0.46
PTPN22-208ENST00000529045 ATMINO43313 823 aaPredicted RBP12.16□□□□□ -0.46
PTPN22-208ENST00000529045 ASTLQ6HA08 431 aaPredicted RBP12.16□□□□□ -0.46
PTPN22-208ENST00000529045 NKX1-1Q15270 411 aaPredicted RBP12.15□□□□□ -0.46
PTPN22-208ENST00000529045 FAM212AQ96EL1 285 aa12.15□□□□□ -0.46
PTPN22-208ENST00000529045 NESP48681 1621 aa12.15□□□□□ -0.47
PTPN22-208ENST00000529045 ATAD2BQ9ULI0 1458 aa12.14□□□□□ -0.47
PTPN22-208ENST00000529045 KIF21AQ7Z4S6 1674 aa12.12□□□□□ -0.47
PTPN22-208ENST00000529045 PRKCSHP14314 528 aaPredicted RBP12.11□□□□□ -0.47
PTPN22-208ENST00000529045 TAOK2Q9UL54 1235 aa12.11□□□□□ -0.47
PTPN22-208ENST00000529045 CHRM1P11229 460 aaPredicted RBP12.1□□□□□ -0.47
PTPN22-208ENST00000529045 ATN1P54259 1190 aaPredicted RBP12.1□□□□□ -0.47
PTPN22-208ENST00000529045 BMP2KQ9NSY1 1161 aaPredicted RBP12.1□□□□□ -0.47
PTPN22-208ENST00000529045 PCDHB13Q9Y5F0 798 aa12.1□□□□□ -0.47
PTPN22-208ENST00000529045 BAZ1AQ9NRL2 1556 aaPredicted RBP12.09□□□□□ -0.47
PTPN22-208ENST00000529045 POTEB2H3BUK9 544 aa12.09□□□□□ -0.47
PTPN22-208ENST00000529045 METRNQ9UJH8 293 aa12.08□□□□□ -0.48
PTPN22-208ENST00000529045 VGFO15240 615 aaPredicted RBP12.07□□□□□ -0.48
PTPN22-208ENST00000529045 PDS5BQ9NTI5 1447 aa12.06□□□□□ -0.48
PTPN22-208ENST00000529045 SMARCA4P51532 1647 aa12.05□□□□□ -0.48
PTPN22-208ENST00000529045 GTPBP6O43824 516 aaPredicted RBP12.05□□□□□ -0.48
PTPN22-208ENST00000529045 STK25O00506 426 aa12.04□□□□□ -0.48
PTPN22-208ENST00000529045 PYGBP11216 843 aa12.04□□□□□ -0.48
PTPN22-208ENST00000529045 IFNL1Q8IU54 200 aa12.04□□□□□ -0.48
PTPN22-208ENST00000529045 SLC39A7Q92504 469 aa12.04□□□□□ -0.48
PTPN22-208ENST00000529045 C7P10643 843 aa12.03□□□□□ -0.48
PTPN22-208ENST00000529045 TIE1P35590 1138 aa12.03□□□□□ -0.48
PTPN22-208ENST00000529045 BAZ1BQ9UIG0 1483 aaKnown RBP12.02□□□□□ -0.48
PTPN22-208ENST00000529045 WDR62O43379 1518 aa12.02□□□□□ -0.48
PTPN22-208ENST00000529045 TTLL13PA6NNM8 815 aa12.02□□□□□ -0.49
PTPN22-208ENST00000529045 SGIP1Q9BQI5 828 aa12.02□□□□□ -0.49
PTPN22-208ENST00000529045 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
PTPN22-208ENST00000529045 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12□□□□□ -0.49
PTPN22-208ENST00000529045 ZFP91Q96JP5 570 aaPredicted RBP12□□□□□ -0.49
PTPN22-208ENST00000529045 OTUD5Q96G74 571 aa11.99□□□□□ -0.49
PTPN22-208ENST00000529045 MRC2Q9UBG0 1479 aa11.99□□□□□ -0.49
PTPN22-208ENST00000529045 BCL11BQ9C0K0 894 aaPredicted RBP11.97□□□□□ -0.49
PTPN22-208ENST00000529045 POTEJP0CG39 1038 aa11.95□□□□□ -0.5
PTPN22-208ENST00000529045 STK24Q9Y6E0 443 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms