RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 CCDC61Q9Y6R9 512 aa18.54■□□□□ 0.56
COMMD9-205ENST00000528608 NUBP1P53384 320 aa18.53■□□□□ 0.56
COMMD9-205ENST00000528608 DCBLD2Q96PD2 775 aa18.53■□□□□ 0.56
COMMD9-205ENST00000528608 KLHL34Q8N239 644 aa18.51■□□□□ 0.55
COMMD9-205ENST00000528608 FAM212AQ96EL1 285 aa18.47■□□□□ 0.55
COMMD9-205ENST00000528608 POTEIP0CG38 1075 aa18.45■□□□□ 0.54
COMMD9-205ENST00000528608 MS4A3Q96HJ5 214 aa18.45■□□□□ 0.54
COMMD9-205ENST00000528608 KIF12Q96FN5 646 aa18.4■□□□□ 0.54
COMMD9-205ENST00000528608 DCAF8Q5TAQ9 597 aa18.35■□□□□ 0.53
COMMD9-205ENST00000528608 MAP3K13O43283 966 aa18.34■□□□□ 0.53
COMMD9-205ENST00000528608 IFNLR1Q8IU57 520 aaPredicted RBP18.31■□□□□ 0.52
COMMD9-205ENST00000528608 PCDHB13Q9Y5F0 798 aa18.24■□□□□ 0.51
COMMD9-205ENST00000528608 SPOCK2Q92563 424 aa18.23■□□□□ 0.51
COMMD9-205ENST00000528608 GSE1Q14687 1217 aa18.21■□□□□ 0.51
COMMD9-205ENST00000528608 SGIP1Q9BQI5 828 aa18.21■□□□□ 0.51
COMMD9-205ENST00000528608 ASTLQ6HA08 431 aaPredicted RBP18.19■□□□□ 0.5
COMMD9-205ENST00000528608 PYGBP11216 843 aa18.18■□□□□ 0.5
COMMD9-205ENST00000528608 ATMINO43313 823 aaPredicted RBP18.17■□□□□ 0.5
COMMD9-205ENST00000528608 LHX8Q68G74 356 aa18.17■□□□□ 0.5
COMMD9-205ENST00000528608 TRPC6Q9Y210 931 aa18.17■□□□□ 0.5
COMMD9-205ENST00000528608 IFNL1Q8IU54 200 aa18.13■□□□□ 0.49
COMMD9-205ENST00000528608 PELP1Q8IZL8 1130 aaKnown RBP18.13■□□□□ 0.49
COMMD9-205ENST00000528608 TIE1P35590 1138 aa18.12■□□□□ 0.49
COMMD9-205ENST00000528608 BMP2KQ9NSY1 1161 aaPredicted RBP18.12■□□□□ 0.49
COMMD9-205ENST00000528608 ATN1P54259 1190 aaPredicted RBP18.09■□□□□ 0.49
COMMD9-205ENST00000528608 CIZ1Q9ULV3 898 aaPredicted RBP18.09■□□□□ 0.49
COMMD9-205ENST00000528608 SLC39A7Q92504 469 aa18.05■□□□□ 0.48
COMMD9-205ENST00000528608 TTLL13PA6NNM8 815 aa18.03■□□□□ 0.48
COMMD9-205ENST00000528608 METRNQ9UJH8 293 aa18.03■□□□□ 0.48
COMMD9-205ENST00000528608 C7P10643 843 aa18■□□□□ 0.47
COMMD9-205ENST00000528608 PCDHB8Q9UN66 801 aa17.99■□□□□ 0.47
COMMD9-205ENST00000528608 CHRM1P11229 460 aaPredicted RBP17.96■□□□□ 0.47
COMMD9-205ENST00000528608 TMEM106CQ9BVX2 250 aa17.96■□□□□ 0.47
COMMD9-205ENST00000528608 ZNF467Q7Z7K2 595 aaPredicted RBP17.94■□□□□ 0.46
COMMD9-205ENST00000528608 TRIM35Q9UPQ4 493 aa17.93■□□□□ 0.46
COMMD9-205ENST00000528608 POTEB2H3BUK9 544 aa17.86■□□□□ 0.45
COMMD9-205ENST00000528608 TRIM41Q8WV44 630 aa17.84■□□□□ 0.45
COMMD9-205ENST00000528608 SEC24BO95487 1268 aa17.82■□□□□ 0.44
COMMD9-205ENST00000528608 IER5LQ5T953 404 aa17.81■□□□□ 0.44
COMMD9-205ENST00000528608 PSEN1P49768 467 aa17.77■□□□□ 0.44
COMMD9-205ENST00000528608 POTEFA5A3E0 1075 aa17.76■□□□□ 0.43
COMMD9-205ENST00000528608 PDAP1Q13442 181 aaKnown RBP17.74■□□□□ 0.43
COMMD9-205ENST00000528608 COLQQ9Y215 455 aaPredicted RBP17.74■□□□□ 0.43
COMMD9-205ENST00000528608 OTUD5Q96G74 571 aa17.72■□□□□ 0.43
COMMD9-205ENST00000528608 GOLGA2Q08379 1002 aa17.7■□□□□ 0.42
COMMD9-205ENST00000528608 PLCG2P16885 1265 aa17.68■□□□□ 0.42
COMMD9-205ENST00000528608 POTEJP0CG39 1038 aa17.67■□□□□ 0.42
COMMD9-205ENST00000528608 MAMSTRQ6ZN01 415 aa17.67■□□□□ 0.42
COMMD9-205ENST00000528608 IRX5P78411 483 aaPredicted RBP17.63■□□□□ 0.41
COMMD9-205ENST00000528608 MKRN3Q13064 507 aaKnown RBP17.62■□□□□ 0.41
COMMD9-205ENST00000528608 SCUBE2Q9NQ36 999 aa17.62■□□□□ 0.41
COMMD9-205ENST00000528608 CCDC180Q9P1Z9 1646 aa17.61■□□□□ 0.41
COMMD9-205ENST00000528608 OCEL1Q9H607 264 aa17.59■□□□□ 0.41
COMMD9-205ENST00000528608 RIOK3O14730 519 aaKnown RBP17.58■□□□□ 0.4
COMMD9-205ENST00000528608 RNF25Q96BH1 459 aaPredicted RBP17.56■□□□□ 0.4
COMMD9-205ENST00000528608 CABP2Q9NPB3 220 aa17.56■□□□□ 0.4
COMMD9-205ENST00000528608 ECM2O94769 699 aaPredicted RBP17.52■□□□□ 0.4
COMMD9-205ENST00000528608 VGFO15240 615 aaPredicted RBP17.49■□□□□ 0.39
COMMD9-205ENST00000528608 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.49■□□□□ 0.39
COMMD9-205ENST00000528608 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.45■□□□□ 0.38
COMMD9-205ENST00000528608 PKD2Q13563 968 aa17.45■□□□□ 0.38
COMMD9-205ENST00000528608 PDCD7Q8N8D1 485 aaKnown RBP17.45■□□□□ 0.38
COMMD9-205ENST00000528608 ZFP91Q96JP5 570 aaPredicted RBP17.45■□□□□ 0.38
COMMD9-205ENST00000528608 TAOK2Q9UL54 1235 aa17.43■□□□□ 0.38
COMMD9-205ENST00000528608 EFCAB3Q8N7B9 438 aa17.38■□□□□ 0.37
COMMD9-205ENST00000528608 L3MBTL3Q96JM7 780 aaPredicted RBP17.35■□□□□ 0.37
COMMD9-205ENST00000528608 ILDR1Q86SU0 546 aaPredicted RBP17.34■□□□□ 0.37
COMMD9-205ENST00000528608 RGL2O15211 777 aa17.33■□□□□ 0.36
COMMD9-205ENST00000528608 SLAIN1Q8ND83 568 aa17.33■□□□□ 0.36
COMMD9-205ENST00000528608 BCL11BQ9C0K0 894 aaPredicted RBP17.3■□□□□ 0.36
COMMD9-205ENST00000528608 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.3■□□□□ 0.36
COMMD9-205ENST00000528608 C3orf67Q6ZVT6 689 aa17.29■□□□□ 0.36
COMMD9-205ENST00000528608 DPY19L2Q6NUT2 758 aa17.28■□□□□ 0.36
COMMD9-205ENST00000528608 STK24Q9Y6E0 443 aa17.28■□□□□ 0.36
COMMD9-205ENST00000528608 ABCC9O60706 1549 aa17.27■□□□□ 0.36
COMMD9-205ENST00000528608 G3V3G9 751 aa17.26■□□□□ 0.35
COMMD9-205ENST00000528608 STK25O00506 426 aa17.26■□□□□ 0.35
COMMD9-205ENST00000528608 SOX12O15370 315 aa17.24■□□□□ 0.35
COMMD9-205ENST00000528608 FAM163AQ96GL9 167 aaPredicted RBP17.2■□□□□ 0.34
COMMD9-205ENST00000528608 BOLA1Q9Y3E2 137 aa17.2■□□□□ 0.34
COMMD9-205ENST00000528608 PHF8Q9UPP1 1060 aa17.18■□□□□ 0.34
COMMD9-205ENST00000528608 NLRP6P59044 892 aa17.11■□□□□ 0.33
COMMD9-205ENST00000528608 MS4A4AQ96JQ5 239 aa17.1■□□□□ 0.33
COMMD9-205ENST00000528608 POTEMA6NI47 508 aa17.08■□□□□ 0.32
COMMD9-205ENST00000528608 LCE2DQ5TA82 110 aaPredicted RBP17.07■□□□□ 0.32
COMMD9-205ENST00000528608 POTEGQ6S5H5 508 aa17.06■□□□□ 0.32
COMMD9-205ENST00000528608 SNPHO15079 494 aa17.05■□□□□ 0.32
COMMD9-205ENST00000528608 MICALL2Q8IY33 904 aa17.04■□□□□ 0.32
COMMD9-205ENST00000528608 TMEM121BQ9BXQ6 578 aaPredicted RBP17.04■□□□□ 0.32
COMMD9-205ENST00000528608 MFRPQ9BY79 579 aa17.04■□□□□ 0.32
COMMD9-205ENST00000528608 FBXO22Q8NEZ5 403 aa17.03■□□□□ 0.32
COMMD9-205ENST00000528608 HS6ST3Q8IZP7 471 aa16.98■□□□□ 0.31
COMMD9-205ENST00000528608 ST18O60284 1047 aa16.97■□□□□ 0.31
COMMD9-205ENST00000528608 CHGAP10645 457 aaKnown RBP16.96■□□□□ 0.31
COMMD9-205ENST00000528608 DCAF8L2P0C7V8 631 aa16.85■□□□□ 0.29
COMMD9-205ENST00000528608 TMEM92Q6UXU6 159 aa16.85■□□□□ 0.29
COMMD9-205ENST00000528608 HOXB3P14651 431 aaPredicted RBP16.77■□□□□ 0.28
COMMD9-205ENST00000528608 DOK7Q18PE1 504 aa16.77■□□□□ 0.28
COMMD9-205ENST00000528608 MARVELD3Q96A59 401 aa16.77■□□□□ 0.28
COMMD9-205ENST00000528608 PCDH10Q9P2E7 1040 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms