RNA–Protein interactions for RNA: ENST00000528434.5

CELF1-211, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 5

Gene CELF1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-211ENST00000528434 DCAF8Q5TAQ9 597 aa12.9□□□□□ -0.34
CELF1-211ENST00000528434 CACNB1Q02641 598 aaPredicted RBP12.89□□□□□ -0.35
CELF1-211ENST00000528434 RIOK3O14730 519 aaKnown RBP12.88□□□□□ -0.35
CELF1-211ENST00000528434 NKX1-1Q15270 411 aaPredicted RBP12.87□□□□□ -0.35
CELF1-211ENST00000528434 SPDYE1Q8NFV5 336 aaPredicted RBP12.87□□□□□ -0.35
CELF1-211ENST00000528434 GTPBP6O43824 516 aaPredicted RBP12.83□□□□□ -0.36
CELF1-211ENST00000528434 CREBZFQ9NS37 354 aa12.83□□□□□ -0.36
CELF1-211ENST00000528434 MNX1P50219 401 aaPredicted RBP12.82□□□□□ -0.36
CELF1-211ENST00000528434 CHRM1P11229 460 aaPredicted RBP12.81□□□□□ -0.36
CELF1-211ENST00000528434 NBR1Q14596 966 aa12.81□□□□□ -0.36
CELF1-211ENST00000528434 AKT1S1Q96B36 256 aa12.81□□□□□ -0.36
CELF1-211ENST00000528434 FAM212AQ96EL1 285 aa12.8□□□□□ -0.36
CELF1-211ENST00000528434 VGFO15240 615 aaPredicted RBP12.78□□□□□ -0.36
CELF1-211ENST00000528434 PRR29P0C7W0 189 aa12.78□□□□□ -0.36
CELF1-211ENST00000528434 STK25O00506 426 aa12.76□□□□□ -0.37
CELF1-211ENST00000528434 RBM42Q9BTD8 480 aaKnown RBP12.76□□□□□ -0.37
CELF1-211ENST00000528434 CLEC11AQ9Y240 323 aa12.76□□□□□ -0.37
CELF1-211ENST00000528434 SGIP1Q9BQI5 828 aa12.75□□□□□ -0.37
CELF1-211ENST00000528434 RASEFQ8IZ41 740 aa12.72□□□□□ -0.37
CELF1-211ENST00000528434 REM2Q8IYK8 340 aaPredicted RBP12.7□□□□□ -0.38
CELF1-211ENST00000528434 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.66□□□□□ -0.38
CELF1-211ENST00000528434 ZFP91Q96JP5 570 aaPredicted RBP12.66□□□□□ -0.38
CELF1-211ENST00000528434 BCL11BQ9C0K0 894 aaPredicted RBP12.66□□□□□ -0.38
CELF1-211ENST00000528434 STK24Q9Y6E0 443 aa12.65□□□□□ -0.38
CELF1-211ENST00000528434 RYDENQ9NUL5 291 aaKnown RBP12.64□□□□□ -0.39
CELF1-211ENST00000528434 PYGBP11216 843 aa12.62□□□□□ -0.39
CELF1-211ENST00000528434 PITPNM1O00562 1244 aa12.53□□□□□ -0.4
CELF1-211ENST00000528434 ZNF467Q7Z7K2 595 aaPredicted RBP12.46□□□□□ -0.41
CELF1-211ENST00000528434 P3H3Q8IVL6 736 aa12.46□□□□□ -0.41
CELF1-211ENST00000528434 TSPYL2Q9H2G4 693 aaPredicted RBP12.42□□□□□ -0.42
CELF1-211ENST00000528434 PDAP1Q13442 181 aaKnown RBP12.41□□□□□ -0.42
CELF1-211ENST00000528434 CADPS2Q86UW7 1296 aa12.41□□□□□ -0.42
CELF1-211ENST00000528434 CHADLQ6NUI6 762 aa12.39□□□□□ -0.43
CELF1-211ENST00000528434 WDR70Q9NW82 654 aa12.39□□□□□ -0.43
CELF1-211ENST00000528434 FARP1Q9Y4F1 1045 aaPredicted RBP12.37□□□□□ -0.43
CELF1-211ENST00000528434 KCNV2Q8TDN2 545 aa12.36□□□□□ -0.43
CELF1-211ENST00000528434 PCDHB8Q9UN66 801 aa12.36□□□□□ -0.43
CELF1-211ENST00000528434 PCDHB13Q9Y5F0 798 aa12.36□□□□□ -0.43
CELF1-211ENST00000528434 MFRPQ9BY79 579 aa12.33□□□□□ -0.44
CELF1-211ENST00000528434 CCDC61Q9Y6R9 512 aa12.33□□□□□ -0.44
CELF1-211ENST00000528434 PSEN1P49768 467 aa12.32□□□□□ -0.44
CELF1-211ENST00000528434 ZNF579Q8NAF0 562 aaKnown RBP12.32□□□□□ -0.44
CELF1-211ENST00000528434 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.31□□□□□ -0.44
CELF1-211ENST00000528434 GTF3C3Q9Y5Q9 886 aa12.31□□□□□ -0.44
CELF1-211ENST00000528434 TMEM132AQ24JP5 1023 aa12.27□□□□□ -0.45
CELF1-211ENST00000528434 LMOD2Q6P5Q4 547 aa12.27□□□□□ -0.45
CELF1-211ENST00000528434 TIMELESSQ9UNS1 1208 aa12.26□□□□□ -0.45
CELF1-211ENST00000528434 TULP1O00294 542 aaPredicted RBP12.25□□□□□ -0.45
CELF1-211ENST00000528434 PPP1R37O75864 691 aa12.23□□□□□ -0.45
CELF1-211ENST00000528434 PRKAR2AP13861 404 aaKnown RBP12.22□□□□□ -0.45
CELF1-211ENST00000528434 ARHGEF1Q92888 912 aaKnown RBP12.22□□□□□ -0.45
CELF1-211ENST00000528434 FBXO22Q8NEZ5 403 aa12.21□□□□□ -0.45
CELF1-211ENST00000528434 SOX12O15370 315 aa12.2□□□□□ -0.46
CELF1-211ENST00000528434 IFNL1Q8IU54 200 aa12.2□□□□□ -0.46
CELF1-211ENST00000528434 NLRP6P59044 892 aa12.19□□□□□ -0.46
CELF1-211ENST00000528434 EFCAB3Q8N7B9 438 aa12.19□□□□□ -0.46
CELF1-211ENST00000528434 FXR2P51116 673 aaKnown RBP eCLIP12.17□□□□□ -0.46
CELF1-211ENST00000528434 E2F4Q16254 413 aa12.17□□□□□ -0.46
CELF1-211ENST00000528434 MAP3K13O43283 966 aa12.16□□□□□ -0.46
CELF1-211ENST00000528434 ERICH6Q7L0X2 663 aa12.15□□□□□ -0.46
CELF1-211ENST00000528434 KIF12Q96FN5 646 aa12.15□□□□□ -0.46
CELF1-211ENST00000528434 CABP2Q9NPB3 220 aa12.15□□□□□ -0.46
CELF1-211ENST00000528434 PHF8Q9UPP1 1060 aa12.15□□□□□ -0.46
CELF1-211ENST00000528434 PAK3O75914 559 aaPredicted RBP12.14□□□□□ -0.47
CELF1-211ENST00000528434 TESPA1A2RU30 521 aaPredicted RBP12.1□□□□□ -0.47
CELF1-211ENST00000528434 ZC3H15Q8WU90 426 aaKnown RBP12.1□□□□□ -0.47
CELF1-211ENST00000528434 NISCHQ9Y2I1 1504 aa12.08□□□□□ -0.48
CELF1-211ENST00000528434 SEMA3EO15041 775 aa12.08□□□□□ -0.48
CELF1-211ENST00000528434 NCKAP5LQ9HCH0 1330 aa12.07□□□□□ -0.48
CELF1-211ENST00000528434 BRPF1P55201 1214 aaPredicted RBP12.06□□□□□ -0.48
CELF1-211ENST00000528434 PDE4AP27815 886 aa12.04□□□□□ -0.48
CELF1-211ENST00000528434 LARP6Q9BRS8 491 aaKnown RBP12.03□□□□□ -0.48
CELF1-211ENST00000528434 MFSD10Q14728 455 aa12.02□□□□□ -0.49
CELF1-211ENST00000528434 MS4A4AQ96JQ5 239 aa12.02□□□□□ -0.49
CELF1-211ENST00000528434 ARIH1Q9Y4X5 557 aaPredicted RBP12□□□□□ -0.49
CELF1-211ENST00000528434 CRISPLD2Q9H0B8 497 aa11.99□□□□□ -0.49
CELF1-211ENST00000528434 PIP4P2Q8N4L2 257 aa11.98□□□□□ -0.49
CELF1-211ENST00000528434 SLC24A3Q9HC58 644 aa11.98□□□□□ -0.49
CELF1-211ENST00000528434 SMYD5Q6GMV2 418 aa11.97□□□□□ -0.49
CELF1-211ENST00000528434 ZRANB1Q9UGI0 708 aa11.97□□□□□ -0.49
CELF1-211ENST00000528434 ZMYND10O75800 440 aa11.95□□□□□ -0.5
CELF1-211ENST00000528434 DDX27Q96GQ7 796 aaKnown RBP11.95□□□□□ -0.5
CELF1-211ENST00000528434 CAMK2BQ13554 666 aa11.94□□□□□ -0.5
CELF1-211ENST00000528434 CHRDL2Q6WN34 429 aa11.94□□□□□ -0.5
CELF1-211ENST00000528434 NEUROD2Q15784 382 aa11.93□□□□□ -0.5
CELF1-211ENST00000528434 PHF12Q96QT6 1004 aa11.93□□□□□ -0.5
CELF1-211ENST00000528434 C14orf37Q86TY3 774 aa11.92□□□□□ -0.5
CELF1-211ENST00000528434 CD44P16070 742 aaKnown RBP11.9□□□□□ -0.5
CELF1-211ENST00000528434 GOLGA2Q08379 1002 aa11.9□□□□□ -0.5
CELF1-211ENST00000528434 TMEM106CQ9BVX2 250 aa11.9□□□□□ -0.5
CELF1-211ENST00000528434 BARGINQ6ZT62 677 aa11.88□□□□□ -0.51
CELF1-211ENST00000528434 ARXQ96QS3 562 aa11.86□□□□□ -0.51
CELF1-211ENST00000528434 MKRN3Q13064 507 aaKnown RBP11.85□□□□□ -0.51
CELF1-211ENST00000528434 TRPC6Q9Y210 931 aa11.84□□□□□ -0.51
CELF1-211ENST00000528434 ILDR1Q86SU0 546 aaPredicted RBP11.82□□□□□ -0.52
CELF1-211ENST00000528434 MS4A3Q96HJ5 214 aa11.81□□□□□ -0.52
CELF1-211ENST00000528434 GPHNQ9NQX3 736 aaPredicted RBP11.81□□□□□ -0.52
CELF1-211ENST00000528434 MLLT3P42568 568 aaPredicted RBP11.79□□□□□ -0.52
CELF1-211ENST00000528434 PPP1R15BQ5SWA1 713 aa11.79□□□□□ -0.52
CELF1-211ENST00000528434 RBM26Q5T8P6 1007 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms