RNA–Protein interactions for RNA: ENST00000527840.1

SOX6-209, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-209ENST00000527840 MIER1Q8N108 512 aa12.39□□□□□ -0.43
SOX6-209ENST00000527840 SLC39A7Q92504 469 aa12.39□□□□□ -0.43
SOX6-209ENST00000527840 POTEB2H3BUK9 544 aa12.38□□□□□ -0.43
SOX6-209ENST00000527840 OTUD5Q96G74 571 aa12.38□□□□□ -0.43
SOX6-209ENST00000527840 METRNQ9UJH8 293 aa12.37□□□□□ -0.43
SOX6-209ENST00000527840 C7P10643 843 aa12.36□□□□□ -0.43
SOX6-209ENST00000527840 KIF12Q96FN5 646 aa12.36□□□□□ -0.43
SOX6-209ENST00000527840 ZBTB47Q9UFB7 747 aaPredicted RBP12.32□□□□□ -0.44
SOX6-209ENST00000527840 RASEFQ8IZ41 740 aa12.31□□□□□ -0.44
SOX6-209ENST00000527840 PLCD3Q8N3E9 789 aa12.3□□□□□ -0.44
SOX6-209ENST00000527840 TIE1P35590 1138 aa12.27□□□□□ -0.45
SOX6-209ENST00000527840 ATN1P54259 1190 aaPredicted RBP12.27□□□□□ -0.45
SOX6-209ENST00000527840 MAP3K13O43283 966 aa12.26□□□□□ -0.45
SOX6-209ENST00000527840 MAMSTRQ6ZN01 415 aa12.25□□□□□ -0.45
SOX6-209ENST00000527840 BMP2KQ9NSY1 1161 aaPredicted RBP12.25□□□□□ -0.45
SOX6-209ENST00000527840 SGIP1Q9BQI5 828 aa12.23□□□□□ -0.45
SOX6-209ENST00000527840 FKBP8Q14318 412 aa12.21□□□□□ -0.45
SOX6-209ENST00000527840 TRPC6Q9Y210 931 aa12.2□□□□□ -0.46
SOX6-209ENST00000527840 NUBP1P53384 320 aa12.19□□□□□ -0.46
SOX6-209ENST00000527840 POTEJP0CG39 1038 aa12.18□□□□□ -0.46
SOX6-209ENST00000527840 SCUBE2Q9NQ36 999 aa12.16□□□□□ -0.46
SOX6-209ENST00000527840 TTLL13PA6NNM8 815 aa12.15□□□□□ -0.46
SOX6-209ENST00000527840 FAM212AQ96EL1 285 aa12.15□□□□□ -0.46
SOX6-209ENST00000527840 PCDHB13Q9Y5F0 798 aa12.14□□□□□ -0.47
SOX6-209ENST00000527840 POTEFA5A3E0 1075 aa12.12□□□□□ -0.47
SOX6-209ENST00000527840 POTEMA6NI47 508 aa12.12□□□□□ -0.47
SOX6-209ENST00000527840 IER5LQ5T953 404 aa12.1□□□□□ -0.47
SOX6-209ENST00000527840 POTEGQ6S5H5 508 aa12.08□□□□□ -0.48
SOX6-209ENST00000527840 PLSCR2Q9NRY7 297 aa12.08□□□□□ -0.48
SOX6-209ENST00000527840 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
SOX6-209ENST00000527840 TRIM35Q9UPQ4 493 aa12.08□□□□□ -0.48
SOX6-209ENST00000527840 SEC24BO95487 1268 aa12.07□□□□□ -0.48
SOX6-209ENST00000527840 IFNL1Q8IU54 200 aa12.05□□□□□ -0.48
SOX6-209ENST00000527840 COLQQ9Y215 455 aaPredicted RBP12.03□□□□□ -0.48
SOX6-209ENST00000527840 PCDH10Q9P2E7 1040 aa12.02□□□□□ -0.49
SOX6-209ENST00000527840 TMEM106CQ9BVX2 250 aa11.99□□□□□ -0.49
SOX6-209ENST00000527840 LCE2DQ5TA82 110 aaPredicted RBP11.96□□□□□ -0.49
SOX6-209ENST00000527840 DCAF8Q5TAQ9 597 aa11.96□□□□□ -0.49
SOX6-209ENST00000527840 FAM163AQ96GL9 167 aaPredicted RBP11.93□□□□□ -0.5
SOX6-209ENST00000527840 PLCG2P16885 1265 aa11.92□□□□□ -0.5
SOX6-209ENST00000527840 PYGBP11216 843 aa11.91□□□□□ -0.5
SOX6-209ENST00000527840 VASPP50552 380 aaPredicted RBP11.9□□□□□ -0.5
SOX6-209ENST00000527840 IRX5P78411 483 aaPredicted RBP11.9□□□□□ -0.5
SOX6-209ENST00000527840 GSE1Q14687 1217 aa11.88□□□□□ -0.51
SOX6-209ENST00000527840 KLHL34Q8N239 644 aa11.84□□□□□ -0.51
SOX6-209ENST00000527840 SLAIN1Q8ND83 568 aa11.84□□□□□ -0.51
SOX6-209ENST00000527840 OCEL1Q9H607 264 aa11.84□□□□□ -0.51
SOX6-209ENST00000527840 ZNF467Q7Z7K2 595 aaPredicted RBP11.83□□□□□ -0.52
SOX6-209ENST00000527840 PCDHB8Q9UN66 801 aa11.83□□□□□ -0.52
SOX6-209ENST00000527840 CHRM1P11229 460 aaPredicted RBP11.78□□□□□ -0.52
SOX6-209ENST00000527840 ST18O60284 1047 aa11.72□□□□□ -0.53
SOX6-209ENST00000527840 GOLGA2Q08379 1002 aa11.72□□□□□ -0.53
SOX6-209ENST00000527840 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.72□□□□□ -0.53
SOX6-209ENST00000527840 MKRN3Q13064 507 aaKnown RBP11.7□□□□□ -0.54
SOX6-209ENST00000527840 PDCD7Q8N8D1 485 aaKnown RBP11.7□□□□□ -0.54
SOX6-209ENST00000527840 SNPHO15079 494 aa11.69□□□□□ -0.54
SOX6-209ENST00000527840 CDAN1Q8IWY9 1227 aa11.68□□□□□ -0.54
SOX6-209ENST00000527840 TMEM121BQ9BXQ6 578 aaPredicted RBP11.68□□□□□ -0.54
SOX6-209ENST00000527840 PSEN1P49768 467 aa11.67□□□□□ -0.54
SOX6-209ENST00000527840 SPOCK2Q92563 424 aa11.67□□□□□ -0.54
SOX6-209ENST00000527840 L3MBTL3Q96JM7 780 aaPredicted RBP11.66□□□□□ -0.54
SOX6-209ENST00000527840 PDAP1Q13442 181 aaKnown RBP11.65□□□□□ -0.54
SOX6-209ENST00000527840 C3orf67Q6ZVT6 689 aa11.64□□□□□ -0.55
SOX6-209ENST00000527840 IFNLR1Q8IU57 520 aaPredicted RBP11.63□□□□□ -0.55
SOX6-209ENST00000527840 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.62□□□□□ -0.55
SOX6-209ENST00000527840 ILDR1Q86SU0 546 aaPredicted RBP11.6□□□□□ -0.55
SOX6-209ENST00000527840 CIZ1Q9ULV3 898 aaPredicted RBP11.59□□□□□ -0.55
SOX6-209ENST00000527840 TRIM41Q8WV44 630 aa11.55□□□□□ -0.56
SOX6-209ENST00000527840 CABP2Q9NPB3 220 aa11.53□□□□□ -0.56
SOX6-209ENST00000527840 G3V3G9 751 aa11.48□□□□□ -0.57
SOX6-209ENST00000527840 MARVELD3Q96A59 401 aa11.48□□□□□ -0.57
SOX6-209ENST00000527840 BOLA1Q9Y3E2 137 aa11.46□□□□□ -0.57
SOX6-209ENST00000527840 EMP3P54852 163 aa11.44□□□□□ -0.58
SOX6-209ENST00000527840 DPY19L2Q6NUT2 758 aa11.44□□□□□ -0.58
SOX6-209ENST00000527840 SPNS2Q8IVW8 549 aa11.4□□□□□ -0.58
SOX6-209ENST00000527840 MMRN1Q13201 1228 aa11.38□□□□□ -0.59
SOX6-209ENST00000527840 EFCAB3Q8N7B9 438 aa11.37□□□□□ -0.59
SOX6-209ENST00000527840 HS3ST6Q96QI5 342 aa11.36□□□□□ -0.59
SOX6-209ENST00000527840 HOXB3P14651 431 aaPredicted RBP11.34□□□□□ -0.59
SOX6-209ENST00000527840 FAM205CA6NFA0 338 aa11.33□□□□□ -0.6
SOX6-209ENST00000527840 RIOK3O14730 519 aaKnown RBP11.33□□□□□ -0.6
SOX6-209ENST00000527840 DOK7Q18PE1 504 aa11.32□□□□□ -0.6
SOX6-209ENST00000527840 SOX12O15370 315 aa11.31□□□□□ -0.6
SOX6-209ENST00000527840 HOXB1P14653 301 aaPredicted RBP11.3□□□□□ -0.6
SOX6-209ENST00000527840 ZNF710Q8N1W2 664 aa11.3□□□□□ -0.6
SOX6-209ENST00000527840 KRTAP3-3Q9BYR6 98 aa11.3□□□□□ -0.6
SOX6-209ENST00000527840 KRTAP3-2Q9BYR7 98 aa11.3□□□□□ -0.6
SOX6-209ENST00000527840 POTEB3A0JP26 581 aa11.29□□□□□ -0.6
SOX6-209ENST00000527840 VGFO15240 615 aaPredicted RBP11.29□□□□□ -0.6
SOX6-209ENST00000527840 POTEBQ6S5H4 581 aa11.29□□□□□ -0.6
SOX6-209ENST00000527840 MICALL2Q8IY33 904 aa11.28□□□□□ -0.6
SOX6-209ENST00000527840 RNF25Q96BH1 459 aaPredicted RBP11.28□□□□□ -0.6
SOX6-209ENST00000527840 RIMBP2O15034 1052 aa11.27□□□□□ -0.61
SOX6-209ENST00000527840 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.26□□□□□ -0.61
SOX6-209ENST00000527840 ZFP91Q96JP5 570 aaPredicted RBP11.26□□□□□ -0.61
SOX6-209ENST00000527840 ZSWIM6Q9HCJ5 1215 aa11.23□□□□□ -0.61
SOX6-209ENST00000527840 TAOK2Q9UL54 1235 aa11.22□□□□□ -0.61
SOX6-209ENST00000527840 MS4A4AQ96JQ5 239 aa11.21□□□□□ -0.61
SOX6-209ENST00000527840 ERBB3P21860 1342 aa11.2□□□□□ -0.62
SOX6-209ENST00000527840 TMEM92Q6UXU6 159 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms