RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 CCDC61Q9Y6R9 512 aa10.98□□□□□ -0.65
CLNS1A-209ENST00000527299 SLC39A7Q92504 469 aa10.96□□□□□ -0.65
CLNS1A-209ENST00000527299 METRNQ9UJH8 293 aa10.96□□□□□ -0.65
CLNS1A-209ENST00000527299 C7P10643 843 aa10.95□□□□□ -0.66
CLNS1A-209ENST00000527299 KIF12Q96FN5 646 aa10.93□□□□□ -0.66
CLNS1A-209ENST00000527299 POTEJP0CG39 1038 aa10.91□□□□□ -0.66
CLNS1A-209ENST00000527299 ATN1P54259 1190 aaPredicted RBP10.89□□□□□ -0.67
CLNS1A-209ENST00000527299 PLSCR2Q9NRY7 297 aa10.89□□□□□ -0.67
CLNS1A-209ENST00000527299 PLEKHG5O94827 1062 aa10.88□□□□□ -0.67
CLNS1A-209ENST00000527299 MIER1Q8N108 512 aa10.88□□□□□ -0.67
CLNS1A-209ENST00000527299 POTEMA6NI47 508 aa10.85□□□□□ -0.67
CLNS1A-209ENST00000527299 RASEFQ8IZ41 740 aa10.85□□□□□ -0.67
CLNS1A-209ENST00000527299 MAMSTRQ6ZN01 415 aa10.84□□□□□ -0.67
CLNS1A-209ENST00000527299 BMP2KQ9NSY1 1161 aaPredicted RBP10.84□□□□□ -0.67
CLNS1A-209ENST00000527299 TRPC6Q9Y210 931 aa10.84□□□□□ -0.67
CLNS1A-209ENST00000527299 MAP3K13O43283 966 aa10.83□□□□□ -0.68
CLNS1A-209ENST00000527299 TIE1P35590 1138 aa10.81□□□□□ -0.68
CLNS1A-209ENST00000527299 POTEGQ6S5H5 508 aa10.81□□□□□ -0.68
CLNS1A-209ENST00000527299 POTEFA5A3E0 1075 aa10.8□□□□□ -0.68
CLNS1A-209ENST00000527299 SCUBE2Q9NQ36 999 aa10.77□□□□□ -0.69
CLNS1A-209ENST00000527299 PLCD3Q8N3E9 789 aa10.76□□□□□ -0.69
CLNS1A-209ENST00000527299 TTLL13PA6NNM8 815 aa10.74□□□□□ -0.69
CLNS1A-209ENST00000527299 SGIP1Q9BQI5 828 aa10.74□□□□□ -0.69
CLNS1A-209ENST00000527299 NUBP1P53384 320 aa10.72□□□□□ -0.69
CLNS1A-209ENST00000527299 LCE2DQ5TA82 110 aaPredicted RBP10.72□□□□□ -0.69
CLNS1A-209ENST00000527299 PCDH10Q9P2E7 1040 aa10.71□□□□□ -0.69
CLNS1A-209ENST00000527299 ZBTB47Q9UFB7 747 aaPredicted RBP10.71□□□□□ -0.69
CLNS1A-209ENST00000527299 COLQQ9Y215 455 aaPredicted RBP10.69□□□□□ -0.7
CLNS1A-209ENST00000527299 PCDHB13Q9Y5F0 798 aa10.69□□□□□ -0.7
CLNS1A-209ENST00000527299 FAM163AQ96GL9 167 aaPredicted RBP10.68□□□□□ -0.7
CLNS1A-209ENST00000527299 SEC24BO95487 1268 aa10.66□□□□□ -0.7
CLNS1A-209ENST00000527299 IER5LQ5T953 404 aa10.66□□□□□ -0.7
CLNS1A-209ENST00000527299 TRIM35Q9UPQ4 493 aa10.66□□□□□ -0.7
CLNS1A-209ENST00000527299 IFNL1Q8IU54 200 aa10.63□□□□□ -0.71
CLNS1A-209ENST00000527299 FAM212AQ96EL1 285 aa10.62□□□□□ -0.71
CLNS1A-209ENST00000527299 FKBP8Q14318 412 aa10.61□□□□□ -0.71
CLNS1A-209ENST00000527299 TMEM106CQ9BVX2 250 aa10.58□□□□□ -0.72
CLNS1A-209ENST00000527299 IRX5P78411 483 aaPredicted RBP10.52□□□□□ -0.73
CLNS1A-209ENST00000527299 PLCG2P16885 1265 aa10.5□□□□□ -0.73
CLNS1A-209ENST00000527299 DCAF8Q5TAQ9 597 aa10.5□□□□□ -0.73
CLNS1A-209ENST00000527299 SLAIN1Q8ND83 568 aa10.49□□□□□ -0.73
CLNS1A-209ENST00000527299 PYGBP11216 843 aa10.48□□□□□ -0.73
CLNS1A-209ENST00000527299 FBXO3Q9UK99 471 aa10.47□□□□□ -0.73
CLNS1A-209ENST00000527299 OCEL1Q9H607 264 aa10.45□□□□□ -0.74
CLNS1A-209ENST00000527299 ST18O60284 1047 aa10.44□□□□□ -0.74
CLNS1A-209ENST00000527299 CDAN1Q8IWY9 1227 aa10.44□□□□□ -0.74
CLNS1A-209ENST00000527299 PCDHB8Q9UN66 801 aa10.44□□□□□ -0.74
CLNS1A-209ENST00000527299 GSE1Q14687 1217 aa10.36□□□□□ -0.75
CLNS1A-209ENST00000527299 VASPP50552 380 aaPredicted RBP10.35□□□□□ -0.75
CLNS1A-209ENST00000527299 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.35□□□□□ -0.75
CLNS1A-209ENST00000527299 ZNF467Q7Z7K2 595 aaPredicted RBP10.34□□□□□ -0.75
CLNS1A-209ENST00000527299 CHRM1P11229 460 aaPredicted RBP10.33□□□□□ -0.76
CLNS1A-209ENST00000527299 KLHL34Q8N239 644 aa10.33□□□□□ -0.76
CLNS1A-209ENST00000527299 PDCD7Q8N8D1 485 aaKnown RBP10.33□□□□□ -0.76
CLNS1A-209ENST00000527299 TMEM121BQ9BXQ6 578 aaPredicted RBP10.32□□□□□ -0.76
CLNS1A-209ENST00000527299 SNPHO15079 494 aa10.31□□□□□ -0.76
CLNS1A-209ENST00000527299 MKRN3Q13064 507 aaKnown RBP10.28□□□□□ -0.76
CLNS1A-209ENST00000527299 GOLGA2Q08379 1002 aa10.26□□□□□ -0.77
CLNS1A-209ENST00000527299 L3MBTL3Q96JM7 780 aaPredicted RBP10.26□□□□□ -0.77
CLNS1A-209ENST00000527299 PSEN1P49768 467 aa10.25□□□□□ -0.77
CLNS1A-209ENST00000527299 C3orf67Q6ZVT6 689 aa10.23□□□□□ -0.77
CLNS1A-209ENST00000527299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.23□□□□□ -0.774e-9■■■■□ 19.7
CLNS1A-209ENST00000527299 ILDR1Q86SU0 546 aaPredicted RBP10.22□□□□□ -0.77
CLNS1A-209ENST00000527299 MARVELD3Q96A59 401 aa10.22□□□□□ -0.77
CLNS1A-209ENST00000527299 SPNS2Q8IVW8 549 aa10.2□□□□□ -0.78
CLNS1A-209ENST00000527299 MMRN1Q13201 1228 aa10.19□□□□□ -0.78
CLNS1A-209ENST00000527299 PDAP1Q13442 181 aaKnown RBP10.19□□□□□ -0.78
CLNS1A-209ENST00000527299 IFNLR1Q8IU57 520 aaPredicted RBP10.16□□□□□ -0.78
CLNS1A-209ENST00000527299 SPOCK2Q92563 424 aa10.16□□□□□ -0.78
CLNS1A-209ENST00000527299 DPY19L2Q6NUT2 758 aa10.14□□□□□ -0.79
CLNS1A-209ENST00000527299 EMP3P54852 163 aa10.13□□□□□ -0.79
CLNS1A-209ENST00000527299 CABP2Q9NPB3 220 aa10.12□□□□□ -0.79
CLNS1A-209ENST00000527299 CIZ1Q9ULV3 898 aaPredicted RBP10.12□□□□□ -0.79
CLNS1A-209ENST00000527299 POTEB3A0JP26 581 aa10.11□□□□□ -0.79
CLNS1A-209ENST00000527299 POTEBQ6S5H4 581 aa10.11□□□□□ -0.79
CLNS1A-209ENST00000527299 HS3ST6Q96QI5 342 aa10.09□□□□□ -0.79
CLNS1A-209ENST00000527299 BOLA1Q9Y3E2 137 aa10.09□□□□□ -0.79
CLNS1A-209ENST00000527299 FAM205CA6NFA0 338 aa10.07□□□□□ -0.8
CLNS1A-209ENST00000527299 KRTAP3-3Q9BYR6 98 aa10.07□□□□□ -0.8
CLNS1A-209ENST00000527299 KRTAP3-2Q9BYR7 98 aa10.07□□□□□ -0.8
CLNS1A-209ENST00000527299 HOXB3P14651 431 aaPredicted RBP10.05□□□□□ -0.8
CLNS1A-209ENST00000527299 G3V3G9 751 aa10.04□□□□□ -0.8
CLNS1A-209ENST00000527299 TRIM41Q8WV44 630 aa10.01□□□□□ -0.81
CLNS1A-209ENST00000527299 HOXB1P14653 301 aaPredicted RBP9.99□□□□□ -0.81
CLNS1A-209ENST00000527299 EFCAB3Q8N7B9 438 aa9.98□□□□□ -0.81
CLNS1A-209ENST00000527299 DOK7Q18PE1 504 aa9.96□□□□□ -0.82
CLNS1A-209ENST00000527299 ZNF710Q8N1W2 664 aa9.96□□□□□ -0.82
CLNS1A-209ENST00000527299 ERBB3P21860 1342 aa9.91□□□□□ -0.82
CLNS1A-209ENST00000527299 MICALL2Q8IY33 904 aa9.91□□□□□ -0.82
CLNS1A-209ENST00000527299 TMEM92Q6UXU6 159 aa9.9□□□□□ -0.82
CLNS1A-209ENST00000527299 RIMBP2O15034 1052 aa9.89□□□□□ -0.83
CLNS1A-209ENST00000527299 SOX12O15370 315 aa9.89□□□□□ -0.83
CLNS1A-209ENST00000527299 RIOK3O14730 519 aaKnown RBP9.88□□□□□ -0.83
CLNS1A-209ENST00000527299 RNF25Q96BH1 459 aaPredicted RBP9.88□□□□□ -0.83
CLNS1A-209ENST00000527299 MS4A4AQ96JQ5 239 aa9.87□□□□□ -0.83
CLNS1A-209ENST00000527299 ZSWIM6Q9HCJ5 1215 aa9.87□□□□□ -0.83
CLNS1A-209ENST00000527299 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.85□□□□□ -0.83
CLNS1A-209ENST00000527299 ZFP91Q96JP5 570 aaPredicted RBP9.85□□□□□ -0.83
CLNS1A-209ENST00000527299 VARS2Q5ST30 1063 aaKnown RBP9.84□□□□□ -0.83
CLNS1A-209ENST00000527299 VGFO15240 615 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms