RNA–Protein interactions for RNA: ENST00000527254.5

MS4A6A-207, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 5

Gene MS4A6A, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-207ENST00000527254 ATMINO43313 823 aaPredicted RBP14□□□□□ -0.17
MS4A6A-207ENST00000527254 ASTLQ6HA08 431 aaPredicted RBP14□□□□□ -0.17
MS4A6A-207ENST00000527254 POTEJP0CG39 1038 aa13.97□□□□□ -0.17
MS4A6A-207ENST00000527254 MIER1Q8N108 512 aa13.97□□□□□ -0.17
MS4A6A-207ENST00000527254 TRPC6Q9Y210 931 aa13.96□□□□□ -0.17
MS4A6A-207ENST00000527254 RASEFQ8IZ41 740 aa13.95□□□□□ -0.18
MS4A6A-207ENST00000527254 KIF12Q96FN5 646 aa13.95□□□□□ -0.18
MS4A6A-207ENST00000527254 METRNQ9UJH8 293 aa13.95□□□□□ -0.18
MS4A6A-207ENST00000527254 ATN1P54259 1190 aaPredicted RBP13.91□□□□□ -0.18
MS4A6A-207ENST00000527254 MAP3K13O43283 966 aa13.88□□□□□ -0.19
MS4A6A-207ENST00000527254 C7P10643 843 aa13.86□□□□□ -0.19
MS4A6A-207ENST00000527254 SLC39A7Q92504 469 aa13.86□□□□□ -0.19
MS4A6A-207ENST00000527254 BMP2KQ9NSY1 1161 aaPredicted RBP13.85□□□□□ -0.19
MS4A6A-207ENST00000527254 POTEFA5A3E0 1075 aa13.82□□□□□ -0.2
MS4A6A-207ENST00000527254 PLCD3Q8N3E9 789 aa13.8□□□□□ -0.2
MS4A6A-207ENST00000527254 PLSCR2Q9NRY7 297 aa13.8□□□□□ -0.2
MS4A6A-207ENST00000527254 PLEKHG5O94827 1062 aa13.79□□□□□ -0.2
MS4A6A-207ENST00000527254 FKBP8Q14318 412 aa13.76□□□□□ -0.21
MS4A6A-207ENST00000527254 NUBP1P53384 320 aa13.75□□□□□ -0.21
MS4A6A-207ENST00000527254 POTEMA6NI47 508 aa13.73□□□□□ -0.21
MS4A6A-207ENST00000527254 TTLL13PA6NNM8 815 aa13.71□□□□□ -0.21
MS4A6A-207ENST00000527254 TIE1P35590 1138 aa13.71□□□□□ -0.21
MS4A6A-207ENST00000527254 COLQQ9Y215 455 aaPredicted RBP13.71□□□□□ -0.21
MS4A6A-207ENST00000527254 POTEGQ6S5H5 508 aa13.7□□□□□ -0.22
MS4A6A-207ENST00000527254 LCE2DQ5TA82 110 aaPredicted RBP13.67□□□□□ -0.22
MS4A6A-207ENST00000527254 PCDHB13Q9Y5F0 798 aa13.66□□□□□ -0.22
MS4A6A-207ENST00000527254 MAMSTRQ6ZN01 415 aa13.64□□□□□ -0.23
MS4A6A-207ENST00000527254 IFNL1Q8IU54 200 aa13.64□□□□□ -0.23
MS4A6A-207ENST00000527254 TRIM35Q9UPQ4 493 aa13.61□□□□□ -0.23
MS4A6A-207ENST00000527254 FAM163AQ96GL9 167 aaPredicted RBP13.6□□□□□ -0.23
MS4A6A-207ENST00000527254 SCUBE2Q9NQ36 999 aa13.59□□□□□ -0.23
MS4A6A-207ENST00000527254 SEC24BO95487 1268 aa13.57□□□□□ -0.24
MS4A6A-207ENST00000527254 SGIP1Q9BQI5 828 aa13.57□□□□□ -0.24
MS4A6A-207ENST00000527254 ZBTB47Q9UFB7 747 aaPredicted RBP13.57□□□□□ -0.24
MS4A6A-207ENST00000527254 FAM212AQ96EL1 285 aa13.55□□□□□ -0.24
MS4A6A-207ENST00000527254 TMEM106CQ9BVX2 250 aa13.53□□□□□ -0.24
MS4A6A-207ENST00000527254 PYGBP11216 843 aa13.5□□□□□ -0.25
MS4A6A-207ENST00000527254 DCAF8Q5TAQ9 597 aa13.49□□□□□ -0.25
MS4A6A-207ENST00000527254 IER5LQ5T953 404 aa13.48□□□□□ -0.25
MS4A6A-207ENST00000527254 PCDHB8Q9UN66 801 aa13.44□□□□□ -0.26
MS4A6A-207ENST00000527254 IRX5P78411 483 aaPredicted RBP13.4□□□□□ -0.26
MS4A6A-207ENST00000527254 FBXO3Q9UK99 471 aa13.37□□□□□ -0.27
MS4A6A-207ENST00000527254 PLCG2P16885 1265 aa13.36□□□□□ -0.27
MS4A6A-207ENST00000527254 SLAIN1Q8ND83 568 aa13.36□□□□□ -0.27
MS4A6A-207ENST00000527254 PCDH10Q9P2E7 1040 aa13.35□□□□□ -0.27
MS4A6A-207ENST00000527254 VASPP50552 380 aaPredicted RBP13.33□□□□□ -0.28
MS4A6A-207ENST00000527254 KLHL34Q8N239 644 aa13.31□□□□□ -0.28
MS4A6A-207ENST00000527254 ST18O60284 1047 aa13.29□□□□□ -0.28
MS4A6A-207ENST00000527254 OCEL1Q9H607 264 aa13.29□□□□□ -0.28
MS4A6A-207ENST00000527254 ABCC9O60706 1549 aa13.25□□□□□ -0.29
MS4A6A-207ENST00000527254 CDAN1Q8IWY9 1227 aa13.23□□□□□ -0.29
MS4A6A-207ENST00000527254 PDCD7Q8N8D1 485 aaKnown RBP13.21□□□□□ -0.29
MS4A6A-207ENST00000527254 GSE1Q14687 1217 aa13.2□□□□□ -0.3
MS4A6A-207ENST00000527254 CHRM1P11229 460 aaPredicted RBP13.16□□□□□ -0.3
MS4A6A-207ENST00000527254 ZNF467Q7Z7K2 595 aaPredicted RBP13.16□□□□□ -0.3
MS4A6A-207ENST00000527254 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
MS4A6A-207ENST00000527254 PSEN1P49768 467 aa13.14□□□□□ -0.31
MS4A6A-207ENST00000527254 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.13□□□□□ -0.31
MS4A6A-207ENST00000527254 MKRN3Q13064 507 aaKnown RBP13.1□□□□□ -0.31
MS4A6A-207ENST00000527254 MARVELD3Q96A59 401 aa13.1□□□□□ -0.31
MS4A6A-207ENST00000527254 GOLGA2Q08379 1002 aa13.08□□□□□ -0.32
MS4A6A-207ENST00000527254 DPY19L2Q6NUT2 758 aa13.08□□□□□ -0.32
MS4A6A-207ENST00000527254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.08□□□□□ -0.32
MS4A6A-207ENST00000527254 CCDC180Q9P1Z9 1646 aa13.07□□□□□ -0.32
MS4A6A-207ENST00000527254 CIZ1Q9ULV3 898 aaPredicted RBP13.06□□□□□ -0.32
MS4A6A-207ENST00000527254 SPOCK2Q92563 424 aa13.05□□□□□ -0.32
MS4A6A-207ENST00000527254 PDAP1Q13442 181 aaKnown RBP13.02□□□□□ -0.33
MS4A6A-207ENST00000527254 C3orf67Q6ZVT6 689 aa13.01□□□□□ -0.33
MS4A6A-207ENST00000527254 ILDR1Q86SU0 546 aaPredicted RBP13.01□□□□□ -0.33
MS4A6A-207ENST00000527254 L3MBTL3Q96JM7 780 aaPredicted RBP13□□□□□ -0.33
MS4A6A-207ENST00000527254 TMEM121BQ9BXQ6 578 aaPredicted RBP13□□□□□ -0.33
MS4A6A-207ENST00000527254 CABP2Q9NPB3 220 aa13□□□□□ -0.33
MS4A6A-207ENST00000527254 SNPHO15079 494 aa12.99□□□□□ -0.33
MS4A6A-207ENST00000527254 POTEB3A0JP26 581 aa12.96□□□□□ -0.33
MS4A6A-207ENST00000527254 POTEBQ6S5H4 581 aa12.96□□□□□ -0.33
MS4A6A-207ENST00000527254 SPNS2Q8IVW8 549 aa12.93□□□□□ -0.34
MS4A6A-207ENST00000527254 MMRN1Q13201 1228 aa12.9□□□□□ -0.34
MS4A6A-207ENST00000527254 EMP3P54852 163 aa12.89□□□□□ -0.35
MS4A6A-207ENST00000527254 BOLA1Q9Y3E2 137 aa12.88□□□□□ -0.35
MS4A6A-207ENST00000527254 FAM205CA6NFA0 338 aa12.85□□□□□ -0.35
MS4A6A-207ENST00000527254 HOXB3P14651 431 aaPredicted RBP12.85□□□□□ -0.35
MS4A6A-207ENST00000527254 EFCAB3Q8N7B9 438 aa12.85□□□□□ -0.35
MS4A6A-207ENST00000527254 HS3ST6Q96QI5 342 aa12.84□□□□□ -0.35
MS4A6A-207ENST00000527254 KRTAP3-3Q9BYR6 98 aa12.83□□□□□ -0.36
MS4A6A-207ENST00000527254 KRTAP3-2Q9BYR7 98 aa12.83□□□□□ -0.36
MS4A6A-207ENST00000527254 RNF25Q96BH1 459 aaPredicted RBP12.79□□□□□ -0.36
MS4A6A-207ENST00000527254 G3V3G9 751 aa12.76□□□□□ -0.37
MS4A6A-207ENST00000527254 TMEM92Q6UXU6 159 aa12.75□□□□□ -0.37
MS4A6A-207ENST00000527254 MS4A4AQ96JQ5 239 aa12.71□□□□□ -0.37
MS4A6A-207ENST00000527254 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.7□□□□□ -0.38
MS4A6A-207ENST00000527254 ZFP91Q96JP5 570 aaPredicted RBP12.7□□□□□ -0.38
MS4A6A-207ENST00000527254 MICALL2Q8IY33 904 aa12.69□□□□□ -0.38
MS4A6A-207ENST00000527254 TRIM41Q8WV44 630 aa12.69□□□□□ -0.38
MS4A6A-207ENST00000527254 RIOK3O14730 519 aaKnown RBP12.68□□□□□ -0.38
MS4A6A-207ENST00000527254 HOXB1P14653 301 aaPredicted RBP12.68□□□□□ -0.38
MS4A6A-207ENST00000527254 PHF8Q9UPP1 1060 aa12.67□□□□□ -0.38
MS4A6A-207ENST00000527254 ZNF710Q8N1W2 664 aa12.66□□□□□ -0.38
MS4A6A-207ENST00000527254 DOK7Q18PE1 504 aa12.63□□□□□ -0.39
MS4A6A-207ENST00000527254 ERBB3P21860 1342 aa12.62□□□□□ -0.39
MS4A6A-207ENST00000527254 SOX12O15370 315 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms