RNA–Protein interactions for RNA: ENST00000526845.1

TRIM3-204, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 658 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-204ENST00000526845 PKD2Q13563 968 aa8.31□□□□□ -1.08
TRIM3-204ENST00000526845 SPOCK2Q92563 424 aa8.31□□□□□ -1.08
TRIM3-204ENST00000526845 POTEGQ6S5H5 508 aa8.3□□□□□ -1.08
TRIM3-204ENST00000526845 ZBTB47Q9UFB7 747 aaPredicted RBP8.3□□□□□ -1.08
TRIM3-204ENST00000526845 POTEIP0CG38 1075 aa8.28□□□□□ -1.08
TRIM3-204ENST00000526845 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.27□□□□□ -1.09
TRIM3-204ENST00000526845 NPM1P06748 294 aaKnown RBP eCLIP8.26□□□□□ -1.09
TRIM3-204ENST00000526845 NUBP1P53384 320 aa8.25□□□□□ -1.09
TRIM3-204ENST00000526845 RASEFQ8IZ41 740 aa8.25□□□□□ -1.09
TRIM3-204ENST00000526845 ECM2O94769 699 aaPredicted RBP8.24□□□□□ -1.09
TRIM3-204ENST00000526845 VSIG10Q8N0Z9 540 aa8.24□□□□□ -1.09
TRIM3-204ENST00000526845 BBXQ8WY36 941 aaPredicted RBP8.22□□□□□ -1.09
TRIM3-204ENST00000526845 BCANQ96GW7 911 aa8.22□□□□□ -1.09
TRIM3-204ENST00000526845 CD44P16070 742 aaKnown RBP8.2□□□□□ -1.1
TRIM3-204ENST00000526845 TSPYL2Q9H2G4 693 aaPredicted RBP8.2□□□□□ -1.1
TRIM3-204ENST00000526845 FAM212AQ96EL1 285 aa8.18□□□□□ -1.1
TRIM3-204ENST00000526845 CIZ1Q9ULV3 898 aaPredicted RBP8.18□□□□□ -1.1
TRIM3-204ENST00000526845 DCAF8Q5TAQ9 597 aa8.16□□□□□ -1.1
TRIM3-204ENST00000526845 OTUD5Q96G74 571 aa8.16□□□□□ -1.1
TRIM3-204ENST00000526845 ZRANB1Q9UGI0 708 aa8.15□□□□□ -1.1
TRIM3-204ENST00000526845 PAK3O75914 559 aaPredicted RBP8.14□□□□□ -1.11
TRIM3-204ENST00000526845 PAXIP1Q6ZW49 1069 aaPredicted RBP8.12□□□□□ -1.11
TRIM3-204ENST00000526845 PHF12Q96QT6 1004 aa8.12□□□□□ -1.11
TRIM3-204ENST00000526845 CLCN6P51797 869 aa8.11□□□□□ -1.11
TRIM3-204ENST00000526845 GSE1Q14687 1217 aa8.11□□□□□ -1.11
TRIM3-204ENST00000526845 TRIM41Q8WV44 630 aa8.11□□□□□ -1.11
TRIM3-204ENST00000526845 CCDC61Q9Y6R9 512 aa8.11□□□□□ -1.11
TRIM3-204ENST00000526845 PYGBP11216 843 aa8.1□□□□□ -1.11
TRIM3-204ENST00000526845 CFAP44Q96MT7 982 aa8.1□□□□□ -1.11
TRIM3-204ENST00000526845 SPRYD3Q8NCJ5 442 aa8.09□□□□□ -1.11
TRIM3-204ENST00000526845 RGL2O15211 777 aa8.08□□□□□ -1.12
TRIM3-204ENST00000526845 ZNF579Q8NAF0 562 aaKnown RBP8.08□□□□□ -1.12
TRIM3-204ENST00000526845 MAP3K13O43283 966 aa8.03□□□□□ -1.12
TRIM3-204ENST00000526845 KIF12Q96FN5 646 aa8.03□□□□□ -1.12
TRIM3-204ENST00000526845 CHGAP10645 457 aaKnown RBP8.02□□□□□ -1.13
TRIM3-204ENST00000526845 RNF25Q96BH1 459 aaPredicted RBP8.02□□□□□ -1.13
TRIM3-204ENST00000526845 DCBLD2Q96PD2 775 aa8.02□□□□□ -1.13
TRIM3-204ENST00000526845 TAOK2Q9UL54 1235 aa8.02□□□□□ -1.13
TRIM3-204ENST00000526845 MS4A3Q96HJ5 214 aa8□□□□□ -1.13
TRIM3-204ENST00000526845 KDM2AQ9Y2K7 1162 aa8□□□□□ -1.13
TRIM3-204ENST00000526845 PCDHB13Q9Y5F0 798 aa8□□□□□ -1.13
TRIM3-204ENST00000526845 GALR2O43603 387 aaPredicted RBP7.99□□□□□ -1.13
TRIM3-204ENST00000526845 CHRM1P11229 460 aaPredicted RBP7.98□□□□□ -1.13
TRIM3-204ENST00000526845 IFNL1Q8IU54 200 aa7.98□□□□□ -1.13
TRIM3-204ENST00000526845 PCDHB8Q9UN66 801 aa7.98□□□□□ -1.13
TRIM3-204ENST00000526845 POTEB2H3BUK9 544 aa7.96□□□□□ -1.14
TRIM3-204ENST00000526845 HS6ST3Q8IZP7 471 aa7.96□□□□□ -1.14
TRIM3-204ENST00000526845 TRPC6Q9Y210 931 aa7.96□□□□□ -1.14
TRIM3-204ENST00000526845 RIOK3O14730 519 aaKnown RBP7.95□□□□□ -1.14
TRIM3-204ENST00000526845 TSHZ2Q9NRE2 1034 aa7.94□□□□□ -1.14
TRIM3-204ENST00000526845 LCE2DQ5TA82 110 aaPredicted RBP7.93□□□□□ -1.14
TRIM3-204ENST00000526845 ZNF467Q7Z7K2 595 aaPredicted RBP7.93□□□□□ -1.14
TRIM3-204ENST00000526845 SGIP1Q9BQI5 828 aa7.92□□□□□ -1.14
TRIM3-204ENST00000526845 DNAJC5Q9H3Z4 198 aa7.92□□□□□ -1.14
TRIM3-204ENST00000526845 PRKCSHP14314 528 aaPredicted RBP7.91□□□□□ -1.14
TRIM3-204ENST00000526845 TPRNQ4KMQ1 711 aa7.89□□□□□ -1.15
TRIM3-204ENST00000526845 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.88□□□□□ -1.15
TRIM3-204ENST00000526845 VGFO15240 615 aaPredicted RBP7.88□□□□□ -1.15
TRIM3-204ENST00000526845 PSEN1P49768 467 aa7.88□□□□□ -1.15
TRIM3-204ENST00000526845 PDAP1Q13442 181 aaKnown RBP7.88□□□□□ -1.15
TRIM3-204ENST00000526845 NBR1Q14596 966 aa7.88□□□□□ -1.15
TRIM3-204ENST00000526845 ZFP91Q96JP5 570 aaPredicted RBP7.88□□□□□ -1.15
TRIM3-204ENST00000526845 BMP2KQ9NSY1 1161 aaPredicted RBP7.87□□□□□ -1.15
TRIM3-204ENST00000526845 TMEM106CQ9BVX2 250 aa7.86□□□□□ -1.15
TRIM3-204ENST00000526845 TTLL13PA6NNM8 815 aa7.85□□□□□ -1.15
TRIM3-204ENST00000526845 RYDENQ9NUL5 291 aaKnown RBP7.85□□□□□ -1.15
TRIM3-204ENST00000526845 STK25O00506 426 aa7.84□□□□□ -1.15
TRIM3-204ENST00000526845 TIE1P35590 1138 aa7.84□□□□□ -1.15
TRIM3-204ENST00000526845 BCL11BQ9C0K0 894 aaPredicted RBP7.84□□□□□ -1.15
TRIM3-204ENST00000526845 ATMINO43313 823 aaPredicted RBP7.82□□□□□ -1.16
TRIM3-204ENST00000526845 ATN1P54259 1190 aaPredicted RBP7.82□□□□□ -1.16
TRIM3-204ENST00000526845 STK24Q9Y6E0 443 aa7.82□□□□□ -1.16
TRIM3-204ENST00000526845 CABP2Q9NPB3 220 aa7.81□□□□□ -1.16
TRIM3-204ENST00000526845 ASTLQ6HA08 431 aaPredicted RBP7.8□□□□□ -1.16
TRIM3-204ENST00000526845 TRIM35Q9UPQ4 493 aa7.8□□□□□ -1.16
TRIM3-204ENST00000526845 PELP1Q8IZL8 1130 aaKnown RBP7.79□□□□□ -1.16
TRIM3-204ENST00000526845 GTPBP6O43824 516 aaPredicted RBP7.77□□□□□ -1.17
TRIM3-204ENST00000526845 NKX1-1Q15270 411 aaPredicted RBP7.76□□□□□ -1.17
TRIM3-204ENST00000526845 MAMSTRQ6ZN01 415 aa7.76□□□□□ -1.17
TRIM3-204ENST00000526845 CDAN1Q8IWY9 1227 aa7.76□□□□□ -1.17
TRIM3-204ENST00000526845 FAM163AQ96GL9 167 aaPredicted RBP7.76□□□□□ -1.17
TRIM3-204ENST00000526845 GOLGA2Q08379 1002 aa7.75□□□□□ -1.17
TRIM3-204ENST00000526845 EFCAB3Q8N7B9 438 aa7.75□□□□□ -1.17
TRIM3-204ENST00000526845 MKRN3Q13064 507 aaKnown RBP7.72□□□□□ -1.17
TRIM3-204ENST00000526845 METRNQ9UJH8 293 aa7.71□□□□□ -1.18
TRIM3-204ENST00000526845 POTEJP0CG39 1038 aa7.7□□□□□ -1.18
TRIM3-204ENST00000526845 MMRN1Q13201 1228 aa7.7□□□□□ -1.18
TRIM3-204ENST00000526845 PHF8Q9UPP1 1060 aa7.7□□□□□ -1.18
TRIM3-204ENST00000526845 P3H3Q8IVL6 736 aa7.69□□□□□ -1.18
TRIM3-204ENST00000526845 MFRPQ9BY79 579 aa7.69□□□□□ -1.18
TRIM3-204ENST00000526845 SLC39A7Q92504 469 aa7.68□□□□□ -1.18
TRIM3-204ENST00000526845 COLQQ9Y215 455 aaPredicted RBP7.68□□□□□ -1.18
TRIM3-204ENST00000526845 POTEFA5A3E0 1075 aa7.67□□□□□ -1.18
TRIM3-204ENST00000526845 IRX5P78411 483 aaPredicted RBP7.67□□□□□ -1.18
TRIM3-204ENST00000526845 IER5LQ5T953 404 aa7.67□□□□□ -1.18
TRIM3-204ENST00000526845 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.67□□□□□ -1.18
TRIM3-204ENST00000526845 PDCD7Q8N8D1 485 aaKnown RBP7.66□□□□□ -1.18
TRIM3-204ENST00000526845 FBXO22Q8NEZ5 403 aa7.66□□□□□ -1.18
TRIM3-204ENST00000526845 MS4A4AQ96JQ5 239 aa7.66□□□□□ -1.18
TRIM3-204ENST00000526845 SEC24BO95487 1268 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms