RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 C7P10643 843 aa11.1□□□□□ -0.63
COPB1-205ENST00000526527 SLC39A7Q92504 469 aa11.1□□□□□ -0.63
COPB1-205ENST00000526527 MS4A3Q96HJ5 214 aa11.1□□□□□ -0.63
COPB1-205ENST00000526527 POTEJP0CG39 1038 aa11.09□□□□□ -0.63
COPB1-205ENST00000526527 PCDH10Q9P2E7 1040 aa11.09□□□□□ -0.63
COPB1-205ENST00000526527 MAMSTRQ6ZN01 415 aa11.05□□□□□ -0.64
COPB1-205ENST00000526527 TSPYL2Q9H2G4 693 aaPredicted RBP10.99□□□□□ -0.65
COPB1-205ENST00000526527 ATN1P54259 1190 aaPredicted RBP10.97□□□□□ -0.65
COPB1-205ENST00000526527 FAM163AQ96GL9 167 aaPredicted RBP10.97□□□□□ -0.65
COPB1-205ENST00000526527 LCE2DQ5TA82 110 aaPredicted RBP10.96□□□□□ -0.65
COPB1-205ENST00000526527 CCDC61Q9Y6R9 512 aa10.96□□□□□ -0.65
COPB1-205ENST00000526527 KIF12Q96FN5 646 aa10.94□□□□□ -0.66
COPB1-205ENST00000526527 SCUBE2Q9NQ36 999 aa10.94□□□□□ -0.66
COPB1-205ENST00000526527 EHMT2Q96KQ7 1210 aa10.92□□□□□ -0.66
COPB1-205ENST00000526527 POTEFA5A3E0 1075 aa10.91□□□□□ -0.66
COPB1-205ENST00000526527 BMP2KQ9NSY1 1161 aaPredicted RBP10.89□□□□□ -0.67
COPB1-205ENST00000526527 PROM2Q8N271 834 aa10.88□□□□□ -0.67
COPB1-205ENST00000526527 TRPC6Q9Y210 931 aa10.86□□□□□ -0.67
COPB1-205ENST00000526527 MAP3K13O43283 966 aa10.84□□□□□ -0.67
COPB1-205ENST00000526527 TIE1P35590 1138 aa10.84□□□□□ -0.67
COPB1-205ENST00000526527 COLQQ9Y215 455 aaPredicted RBP10.79□□□□□ -0.68
COPB1-205ENST00000526527 SEC24BO95487 1268 aa10.77□□□□□ -0.69
COPB1-205ENST00000526527 RASEFQ8IZ41 740 aa10.77□□□□□ -0.69
COPB1-205ENST00000526527 MIER1Q8N108 512 aa10.77□□□□□ -0.69
COPB1-205ENST00000526527 TTLL13PA6NNM8 815 aa10.76□□□□□ -0.69
COPB1-205ENST00000526527 PLEKHG5O94827 1062 aa10.76□□□□□ -0.69
COPB1-205ENST00000526527 CDAN1Q8IWY9 1227 aa10.72□□□□□ -0.69
COPB1-205ENST00000526527 IER5LQ5T953 404 aa10.71□□□□□ -0.69
COPB1-205ENST00000526527 SGIP1Q9BQI5 828 aa10.71□□□□□ -0.69
COPB1-205ENST00000526527 TRIM35Q9UPQ4 493 aa10.69□□□□□ -0.7
COPB1-205ENST00000526527 PCDHB13Q9Y5F0 798 aa10.66□□□□□ -0.7
COPB1-205ENST00000526527 SLAIN1Q8ND83 568 aa10.64□□□□□ -0.71
COPB1-205ENST00000526527 ST18O60284 1047 aa10.63□□□□□ -0.71
COPB1-205ENST00000526527 NUBP1P53384 320 aa10.6□□□□□ -0.71
COPB1-205ENST00000526527 PLCD3Q8N3E9 789 aa10.6□□□□□ -0.71
COPB1-205ENST00000526527 IFNL1Q8IU54 200 aa10.59□□□□□ -0.71
COPB1-205ENST00000526527 TMEM106CQ9BVX2 250 aa10.57□□□□□ -0.72
COPB1-205ENST00000526527 PLCG2P16885 1265 aa10.56□□□□□ -0.72
COPB1-205ENST00000526527 ZBTB47Q9UFB7 747 aaPredicted RBP10.56□□□□□ -0.72
COPB1-205ENST00000526527 IRX5P78411 483 aaPredicted RBP10.53□□□□□ -0.72
COPB1-205ENST00000526527 MMRN1Q13201 1228 aa10.49□□□□□ -0.73
COPB1-205ENST00000526527 SPNS2Q8IVW8 549 aa10.49□□□□□ -0.73
COPB1-205ENST00000526527 FAM212AQ96EL1 285 aa10.49□□□□□ -0.73
COPB1-205ENST00000526527 OCEL1Q9H607 264 aa10.49□□□□□ -0.73
COPB1-205ENST00000526527 TMEM121BQ9BXQ6 578 aaPredicted RBP10.48□□□□□ -0.73
COPB1-205ENST00000526527 SNPHO15079 494 aa10.46□□□□□ -0.73
COPB1-205ENST00000526527 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.43□□□□□ -0.74
COPB1-205ENST00000526527 DCAF8Q5TAQ9 597 aa10.39□□□□□ -0.75
COPB1-205ENST00000526527 MARVELD3Q96A59 401 aa10.39□□□□□ -0.75
COPB1-205ENST00000526527 PYGBP11216 843 aa10.38□□□□□ -0.75
COPB1-205ENST00000526527 PCDHB8Q9UN66 801 aa10.36□□□□□ -0.75
COPB1-205ENST00000526527 PDCD7Q8N8D1 485 aaKnown RBP10.3□□□□□ -0.76
COPB1-205ENST00000526527 L3MBTL3Q96JM7 780 aaPredicted RBP10.28□□□□□ -0.76
COPB1-205ENST00000526527 EMP3P54852 163 aa10.27□□□□□ -0.77
COPB1-205ENST00000526527 C3orf67Q6ZVT6 689 aa10.27□□□□□ -0.77
COPB1-205ENST00000526527 POTEB3A0JP26 581 aa10.25□□□□□ -0.77
COPB1-205ENST00000526527 MKRN3Q13064 507 aaKnown RBP10.25□□□□□ -0.77
COPB1-205ENST00000526527 POTEBQ6S5H4 581 aa10.25□□□□□ -0.77
COPB1-205ENST00000526527 HS3ST6Q96QI5 342 aa10.24□□□□□ -0.77
COPB1-205ENST00000526527 KRTAP3-3Q9BYR6 98 aa10.24□□□□□ -0.77
COPB1-205ENST00000526527 KRTAP3-2Q9BYR7 98 aa10.24□□□□□ -0.77
COPB1-205ENST00000526527 FAM205CA6NFA0 338 aa10.22□□□□□ -0.77
COPB1-205ENST00000526527 GOLGA2Q08379 1002 aa10.22□□□□□ -0.77
COPB1-205ENST00000526527 FKBP8Q14318 412 aa10.22□□□□□ -0.77
COPB1-205ENST00000526527 ZNF467Q7Z7K2 595 aaPredicted RBP10.22□□□□□ -0.77
COPB1-205ENST00000526527 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.21□□□□□ -0.772e-9■■■□□ 18.9
COPB1-205ENST00000526527 GSE1Q14687 1217 aa10.19□□□□□ -0.78
COPB1-205ENST00000526527 CHRM1P11229 460 aaPredicted RBP10.18□□□□□ -0.78
COPB1-205ENST00000526527 PSEN1P49768 467 aa10.16□□□□□ -0.78
COPB1-205ENST00000526527 ILDR1Q86SU0 546 aaPredicted RBP10.15□□□□□ -0.78
COPB1-205ENST00000526527 FBXO3Q9UK99 471 aa10.15□□□□□ -0.78
COPB1-205ENST00000526527 DPY19L2Q6NUT2 758 aa10.12□□□□□ -0.79
COPB1-205ENST00000526527 KLHL34Q8N239 644 aa10.12□□□□□ -0.79
COPB1-205ENST00000526527 HOXB3P14651 431 aaPredicted RBP10.09□□□□□ -0.79
COPB1-205ENST00000526527 BOLA1Q9Y3E2 137 aa10.07□□□□□ -0.8
COPB1-205ENST00000526527 HOXB1P14653 301 aaPredicted RBP10.06□□□□□ -0.8
COPB1-205ENST00000526527 PDAP1Q13442 181 aaKnown RBP10.06□□□□□ -0.8
COPB1-205ENST00000526527 G3V3G9 751 aa10.04□□□□□ -0.8
COPB1-205ENST00000526527 ZNF710Q8N1W2 664 aa10.03□□□□□ -0.8
COPB1-205ENST00000526527 VASPP50552 380 aaPredicted RBP10.02□□□□□ -0.81
COPB1-205ENST00000526527 CABP2Q9NPB3 220 aa10.02□□□□□ -0.81
COPB1-205ENST00000526527 ERBB3P21860 1342 aa10.02□□□□□ -0.81
COPB1-205ENST00000526527 DOK7Q18PE1 504 aa10□□□□□ -0.81
COPB1-205ENST00000526527 RNF166Q96A37 237 aaPredicted RBP9.98□□□□□ -0.81
COPB1-205ENST00000526527 RIMBP2O15034 1052 aa9.93□□□□□ -0.82
COPB1-205ENST00000526527 VARS2Q5ST30 1063 aaKnown RBP9.93□□□□□ -0.82
COPB1-205ENST00000526527 MYT1LQ9UL68 1186 aa9.92□□□□□ -0.82
COPB1-205ENST00000526527 CIZ1Q9ULV3 898 aaPredicted RBP9.91□□□□□ -0.82
COPB1-205ENST00000526527 ZNF687Q8N1G0 1237 aa9.9□□□□□ -0.82
COPB1-205ENST00000526527 ZSWIM6Q9HCJ5 1215 aa9.89□□□□□ -0.83
COPB1-205ENST00000526527 SPOCK2Q92563 424 aa9.88□□□□□ -0.83
COPB1-205ENST00000526527 EFCAB3Q8N7B9 438 aa9.86□□□□□ -0.83
COPB1-205ENST00000526527 GPR153Q6NV75 609 aa9.85□□□□□ -0.83
COPB1-205ENST00000526527 TMEM92Q6UXU6 159 aa9.85□□□□□ -0.83
COPB1-205ENST00000526527 IFNLR1Q8IU57 520 aaPredicted RBP9.84□□□□□ -0.83
COPB1-205ENST00000526527 PTGER2P43116 358 aa9.82□□□□□ -0.84
COPB1-205ENST00000526527 MICALL2Q8IY33 904 aa9.82□□□□□ -0.84
COPB1-205ENST00000526527 ANKRD13DQ6ZTN6 518 aa9.77□□□□□ -0.85
COPB1-205ENST00000526527 SOX12O15370 315 aa9.76□□□□□ -0.85
COPB1-205ENST00000526527 ARSIQ5FYB1 569 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms