RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 MAMSTRQ6ZN01 415 aa17.3■□□□□ 0.36
C11orf54-203ENST00000526335 FAM163AQ96GL9 167 aaPredicted RBP17.28■□□□□ 0.36
C11orf54-203ENST00000526335 MS4A3Q96HJ5 214 aa17.28■□□□□ 0.36
C11orf54-203ENST00000526335 ATMINO43313 823 aaPredicted RBP17.28■□□□□ 0.36
C11orf54-203ENST00000526335 LCE2DQ5TA82 110 aaPredicted RBP17.22■□□□□ 0.35
C11orf54-203ENST00000526335 MNX1P50219 401 aaPredicted RBP17.2■□□□□ 0.34
C11orf54-203ENST00000526335 SCUBE2Q9NQ36 999 aa17.18■□□□□ 0.34
C11orf54-203ENST00000526335 SPDYE4A6NLX3 237 aa17.15■□□□□ 0.34
C11orf54-203ENST00000526335 ATN1P54259 1190 aaPredicted RBP17.08■□□□□ 0.32
C11orf54-203ENST00000526335 TSPYL2Q9H2G4 693 aaPredicted RBP17.04■□□□□ 0.32
C11orf54-203ENST00000526335 POTEFA5A3E0 1075 aa16.95■□□□□ 0.3
C11orf54-203ENST00000526335 CDAN1Q8IWY9 1227 aa16.92■□□□□ 0.3
C11orf54-203ENST00000526335 CCDC61Q9Y6R9 512 aa16.92■□□□□ 0.3
C11orf54-203ENST00000526335 BMP2KQ9NSY1 1161 aaPredicted RBP16.91■□□□□ 0.3
C11orf54-203ENST00000526335 KIF12Q96FN5 646 aa16.89■□□□□ 0.3
C11orf54-203ENST00000526335 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
C11orf54-203ENST00000526335 TRPC6Q9Y210 931 aa16.86■□□□□ 0.29
C11orf54-203ENST00000526335 SEC24BO95487 1268 aa16.82■□□□□ 0.28
C11orf54-203ENST00000526335 TIE1P35590 1138 aa16.79■□□□□ 0.28
C11orf54-203ENST00000526335 COLQQ9Y215 455 aaPredicted RBP16.79■□□□□ 0.28
C11orf54-203ENST00000526335 MAP3K13O43283 966 aa16.77■□□□□ 0.28
C11orf54-203ENST00000526335 TTLL13PA6NNM8 815 aa16.7■□□□□ 0.26
C11orf54-203ENST00000526335 ST18O60284 1047 aa16.66■□□□□ 0.26
C11orf54-203ENST00000526335 SLAIN1Q8ND83 568 aa16.65■□□□□ 0.26
C11orf54-203ENST00000526335 TRIM35Q9UPQ4 493 aa16.62■□□□□ 0.25
C11orf54-203ENST00000526335 IER5LQ5T953 404 aa16.6■□□□□ 0.25
C11orf54-203ENST00000526335 RASEFQ8IZ41 740 aa16.6■□□□□ 0.25
C11orf54-203ENST00000526335 PLEKHG5O94827 1062 aa16.57■□□□□ 0.24
C11orf54-203ENST00000526335 MMRN1Q13201 1228 aa16.55■□□□□ 0.24
C11orf54-203ENST00000526335 SPNS2Q8IVW8 549 aa16.51■□□□□ 0.23
C11orf54-203ENST00000526335 MIER1Q8N108 512 aa16.51■□□□□ 0.23
C11orf54-203ENST00000526335 PCDHB13Q9Y5F0 798 aa16.51■□□□□ 0.23
C11orf54-203ENST00000526335 PROM2Q8N271 834 aa16.5■□□□□ 0.23
C11orf54-203ENST00000526335 SGIP1Q9BQI5 828 aa16.45■□□□□ 0.22
C11orf54-203ENST00000526335 PLCG2P16885 1265 aa16.44■□□□□ 0.22
C11orf54-203ENST00000526335 TMEM106CQ9BVX2 250 aa16.38■□□□□ 0.21
C11orf54-203ENST00000526335 TMEM121BQ9BXQ6 578 aaPredicted RBP16.38■□□□□ 0.21
C11orf54-203ENST00000526335 IFNL1Q8IU54 200 aa16.36■□□□□ 0.21
C11orf54-203ENST00000526335 EHMT2Q96KQ7 1210 aa16.36■□□□□ 0.21
C11orf54-203ENST00000526335 MARVELD3Q96A59 401 aa16.34■□□□□ 0.21
C11orf54-203ENST00000526335 SNPHO15079 494 aa16.32■□□□□ 0.2
C11orf54-203ENST00000526335 IRX5P78411 483 aaPredicted RBP16.29■□□□□ 0.2
C11orf54-203ENST00000526335 PLCD3Q8N3E9 789 aa16.28■□□□□ 0.2
C11orf54-203ENST00000526335 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.26■□□□□ 0.19
C11orf54-203ENST00000526335 OCEL1Q9H607 264 aa16.23■□□□□ 0.19
C11orf54-203ENST00000526335 NUBP1P53384 320 aa16.2■□□□□ 0.18
C11orf54-203ENST00000526335 FAM212AQ96EL1 285 aa16.16■□□□□ 0.18
C11orf54-203ENST00000526335 ZBTB47Q9UFB7 747 aaPredicted RBP16.16■□□□□ 0.18
C11orf54-203ENST00000526335 EMP3P54852 163 aa16.13■□□□□ 0.17
C11orf54-203ENST00000526335 KRTAP3-3Q9BYR6 98 aa16.04■□□□□ 0.16
C11orf54-203ENST00000526335 KRTAP3-2Q9BYR7 98 aa16.04■□□□□ 0.16
C11orf54-203ENST00000526335 HS3ST6Q96QI5 342 aa16.02■□□□□ 0.16
C11orf54-203ENST00000526335 FAM205CA6NFA0 338 aa16.01■□□□□ 0.15
C11orf54-203ENST00000526335 C3orf67Q6ZVT6 689 aa16.01■□□□□ 0.15
C11orf54-203ENST00000526335 POTEB3A0JP26 581 aa16■□□□□ 0.15
C11orf54-203ENST00000526335 POTEBQ6S5H4 581 aa16■□□□□ 0.15
C11orf54-203ENST00000526335 PYGBP11216 843 aa15.98■□□□□ 0.15
C11orf54-203ENST00000526335 PCDHB8Q9UN66 801 aa15.98■□□□□ 0.15
C11orf54-203ENST00000526335 DCAF8Q5TAQ9 597 aa15.95■□□□□ 0.14
C11orf54-203ENST00000526335 PDCD7Q8N8D1 485 aaKnown RBP15.92■□□□□ 0.14
C11orf54-203ENST00000526335 L3MBTL3Q96JM7 780 aaPredicted RBP15.91■□□□□ 0.14
C11orf54-203ENST00000526335 GOLGA2Q08379 1002 aa15.86■□□□□ 0.13
C11orf54-203ENST00000526335 MKRN3Q13064 507 aaKnown RBP15.85■□□□□ 0.13
C11orf54-203ENST00000526335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.78■□□□□ 0.122e-7■■■□□ 16.2
C11orf54-203ENST00000526335 RNF166Q96A37 237 aaPredicted RBP15.71■□□□□ 0.11
C11orf54-203ENST00000526335 ZNF467Q7Z7K2 595 aaPredicted RBP15.7■□□□□ 0.1
C11orf54-203ENST00000526335 ERBB3P21860 1342 aa15.66■□□□□ 0.1
C11orf54-203ENST00000526335 HOXB3P14651 431 aaPredicted RBP15.65■□□□□ 0.1
C11orf54-203ENST00000526335 ZNF710Q8N1W2 664 aa15.65■□□□□ 0.1
C11orf54-203ENST00000526335 DPY19L2Q6NUT2 758 aa15.62■□□□□ 0.09
C11orf54-203ENST00000526335 G3V3G9 751 aa15.62■□□□□ 0.09
C11orf54-203ENST00000526335 HOXB1P14653 301 aaPredicted RBP15.62■□□□□ 0.09
C11orf54-203ENST00000526335 PSEN1P49768 467 aa15.6■□□□□ 0.09
C11orf54-203ENST00000526335 MYT1LQ9UL68 1186 aa15.59■□□□□ 0.09
C11orf54-203ENST00000526335 GSE1Q14687 1217 aa15.55■□□□□ 0.08
C11orf54-203ENST00000526335 BOLA1Q9Y3E2 137 aa15.55■□□□□ 0.08
C11orf54-203ENST00000526335 DOK7Q18PE1 504 aa15.54■□□□□ 0.08
C11orf54-203ENST00000526335 ILDR1Q86SU0 546 aaPredicted RBP15.53■□□□□ 0.08
C11orf54-203ENST00000526335 VARS2Q5ST30 1063 aaKnown RBP15.51■□□□□ 0.07
C11orf54-203ENST00000526335 CHRM1P11229 460 aaPredicted RBP15.47■□□□□ 0.07
C11orf54-203ENST00000526335 RIMBP2O15034 1052 aa15.45■□□□□ 0.06
C11orf54-203ENST00000526335 KLHL34Q8N239 644 aa15.45■□□□□ 0.06
C11orf54-203ENST00000526335 PDAP1Q13442 181 aaKnown RBP15.44■□□□□ 0.06
C11orf54-203ENST00000526335 CABP2Q9NPB3 220 aa15.44■□□□□ 0.06
C11orf54-203ENST00000526335 FKBP8Q14318 412 aa15.43■□□□□ 0.06
C11orf54-203ENST00000526335 ZNF687Q8N1G0 1237 aa15.37■□□□□ 0.05
C11orf54-203ENST00000526335 FBXO3Q9UK99 471 aa15.36■□□□□ 0.05
C11orf54-203ENST00000526335 PTGER2P43116 358 aa15.34■□□□□ 0.05
C11orf54-203ENST00000526335 ANKRD13DQ6ZTN6 518 aa15.29■□□□□ 0.04
C11orf54-203ENST00000526335 ZSWIM6Q9HCJ5 1215 aa15.27■□□□□ 0.04
C11orf54-203ENST00000526335 GPR153Q6NV75 609 aa15.23■□□□□ 0.03
C11orf54-203ENST00000526335 VASPP50552 380 aaPredicted RBP15.2■□□□□ 0.02
C11orf54-203ENST00000526335 TMEM92Q6UXU6 159 aa15.18■□□□□ 0.02
C11orf54-203ENST00000526335 MICALL2Q8IY33 904 aa15.14■□□□□ 0.01
C11orf54-203ENST00000526335 EFCAB3Q8N7B9 438 aa15.14■□□□□ 0.01
C11orf54-203ENST00000526335 CIZ1Q9ULV3 898 aaPredicted RBP15.14■□□□□ 0.01
C11orf54-203ENST00000526335 ARSIQ5FYB1 569 aa15.13■□□□□ 0.01
C11orf54-203ENST00000526335 PLA2G2EQ9NZK7 142 aa15.13■□□□□ 0.01
C11orf54-203ENST00000526335 LSM11P83369 360 aaKnown RBP eCLIP15.11■□□□□ 0.01
C11orf54-203ENST00000526335 ZNF316A6NFI3 1004 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms