RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 MIER1Q8N108 512 aa11.5□□□□□ -0.57
ECHDC1-219ENST00000526299 ATMINO43313 823 aaPredicted RBP11.49□□□□□ -0.57
ECHDC1-219ENST00000526299 METRNQ9UJH8 293 aa11.47□□□□□ -0.57
ECHDC1-219ENST00000526299 KIF12Q96FN5 646 aa11.46□□□□□ -0.57
ECHDC1-219ENST00000526299 PLEKHG5O94827 1062 aa11.44□□□□□ -0.58
ECHDC1-219ENST00000526299 RASEFQ8IZ41 740 aa11.44□□□□□ -0.58
ECHDC1-219ENST00000526299 SLC39A7Q92504 469 aa11.43□□□□□ -0.58
ECHDC1-219ENST00000526299 C7P10643 843 aa11.42□□□□□ -0.58
ECHDC1-219ENST00000526299 ATN1P54259 1190 aaPredicted RBP11.41□□□□□ -0.58
ECHDC1-219ENST00000526299 TRPC6Q9Y210 931 aa11.41□□□□□ -0.58
ECHDC1-219ENST00000526299 POTEJP0CG39 1038 aa11.4□□□□□ -0.58
ECHDC1-219ENST00000526299 MAP3K13O43283 966 aa11.39□□□□□ -0.59
ECHDC1-219ENST00000526299 PLCD3Q8N3E9 789 aa11.39□□□□□ -0.59
ECHDC1-219ENST00000526299 BMP2KQ9NSY1 1161 aaPredicted RBP11.37□□□□□ -0.59
ECHDC1-219ENST00000526299 PLSCR2Q9NRY7 297 aa11.33□□□□□ -0.6
ECHDC1-219ENST00000526299 FKBP8Q14318 412 aa11.31□□□□□ -0.6
ECHDC1-219ENST00000526299 POTEFA5A3E0 1075 aa11.3□□□□□ -0.6
ECHDC1-219ENST00000526299 TIE1P35590 1138 aa11.3□□□□□ -0.6
ECHDC1-219ENST00000526299 NUBP1P53384 320 aa11.29□□□□□ -0.6
ECHDC1-219ENST00000526299 POTEMA6NI47 508 aa11.28□□□□□ -0.6
ECHDC1-219ENST00000526299 MAMSTRQ6ZN01 415 aa11.27□□□□□ -0.61
ECHDC1-219ENST00000526299 TTLL13PA6NNM8 815 aa11.26□□□□□ -0.61
ECHDC1-219ENST00000526299 POTEGQ6S5H5 508 aa11.25□□□□□ -0.61
ECHDC1-219ENST00000526299 ZBTB47Q9UFB7 747 aaPredicted RBP11.25□□□□□ -0.61
ECHDC1-219ENST00000526299 PCDHB13Q9Y5F0 798 aa11.24□□□□□ -0.61
ECHDC1-219ENST00000526299 SCUBE2Q9NQ36 999 aa11.23□□□□□ -0.61
ECHDC1-219ENST00000526299 COLQQ9Y215 455 aaPredicted RBP11.22□□□□□ -0.61
ECHDC1-219ENST00000526299 SGIP1Q9BQI5 828 aa11.21□□□□□ -0.61
ECHDC1-219ENST00000526299 TRIM35Q9UPQ4 493 aa11.2□□□□□ -0.62
ECHDC1-219ENST00000526299 IFNL1Q8IU54 200 aa11.19□□□□□ -0.62
ECHDC1-219ENST00000526299 SEC24BO95487 1268 aa11.18□□□□□ -0.62
ECHDC1-219ENST00000526299 FAM212AQ96EL1 285 aa11.18□□□□□ -0.62
ECHDC1-219ENST00000526299 LCE2DQ5TA82 110 aaPredicted RBP11.16□□□□□ -0.62
ECHDC1-219ENST00000526299 FAM163AQ96GL9 167 aaPredicted RBP11.16□□□□□ -0.62
ECHDC1-219ENST00000526299 IER5LQ5T953 404 aa11.12□□□□□ -0.63
ECHDC1-219ENST00000526299 TMEM106CQ9BVX2 250 aa11.12□□□□□ -0.63
ECHDC1-219ENST00000526299 DCAF8Q5TAQ9 597 aa11.11□□□□□ -0.63
ECHDC1-219ENST00000526299 PYGBP11216 843 aa11.08□□□□□ -0.64
ECHDC1-219ENST00000526299 FBXO3Q9UK99 471 aa11.06□□□□□ -0.64
ECHDC1-219ENST00000526299 PCDH10Q9P2E7 1040 aa11.04□□□□□ -0.64
ECHDC1-219ENST00000526299 PLCG2P16885 1265 aa11.03□□□□□ -0.64
ECHDC1-219ENST00000526299 PCDHB8Q9UN66 801 aa11.02□□□□□ -0.65
ECHDC1-219ENST00000526299 IRX5P78411 483 aaPredicted RBP11.01□□□□□ -0.65
ECHDC1-219ENST00000526299 SLAIN1Q8ND83 568 aa10.99□□□□□ -0.65
ECHDC1-219ENST00000526299 VASPP50552 380 aaPredicted RBP10.98□□□□□ -0.65
ECHDC1-219ENST00000526299 KLHL34Q8N239 644 aa10.98□□□□□ -0.65
ECHDC1-219ENST00000526299 OCEL1Q9H607 264 aa10.94□□□□□ -0.66
ECHDC1-219ENST00000526299 GSE1Q14687 1217 aa10.91□□□□□ -0.66
ECHDC1-219ENST00000526299 ST18O60284 1047 aa10.9□□□□□ -0.66
ECHDC1-219ENST00000526299 ZNF467Q7Z7K2 595 aaPredicted RBP10.87□□□□□ -0.67
ECHDC1-219ENST00000526299 CDAN1Q8IWY9 1227 aa10.87□□□□□ -0.67
ECHDC1-219ENST00000526299 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.84□□□□□ -0.67
ECHDC1-219ENST00000526299 CHRM1P11229 460 aaPredicted RBP10.83□□□□□ -0.68
ECHDC1-219ENST00000526299 PDCD7Q8N8D1 485 aaKnown RBP10.83□□□□□ -0.68
ECHDC1-219ENST00000526299 PSEN1P49768 467 aa10.81□□□□□ -0.68
ECHDC1-219ENST00000526299 GOLGA2Q08379 1002 aa10.81□□□□□ -0.68
ECHDC1-219ENST00000526299 MKRN3Q13064 507 aaKnown RBP10.81□□□□□ -0.68
ECHDC1-219ENST00000526299 IFNLR1Q8IU57 520 aaPredicted RBP10.78□□□□□ -0.68
ECHDC1-219ENST00000526299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.77□□□□□ -0.693e-7■■□□□ 13.1
ECHDC1-219ENST00000526299 SPOCK2Q92563 424 aa10.76□□□□□ -0.69
ECHDC1-219ENST00000526299 SNPHO15079 494 aa10.75□□□□□ -0.69
ECHDC1-219ENST00000526299 CIZ1Q9ULV3 898 aaPredicted RBP10.75□□□□□ -0.69
ECHDC1-219ENST00000526299 C3orf67Q6ZVT6 689 aa10.74□□□□□ -0.69
ECHDC1-219ENST00000526299 PDAP1Q13442 181 aaKnown RBP10.73□□□□□ -0.69
ECHDC1-219ENST00000526299 L3MBTL3Q96JM7 780 aaPredicted RBP10.73□□□□□ -0.69
ECHDC1-219ENST00000526299 TMEM121BQ9BXQ6 578 aaPredicted RBP10.73□□□□□ -0.69
ECHDC1-219ENST00000526299 MARVELD3Q96A59 401 aa10.72□□□□□ -0.69
ECHDC1-219ENST00000526299 DPY19L2Q6NUT2 758 aa10.7□□□□□ -0.7
ECHDC1-219ENST00000526299 CABP2Q9NPB3 220 aa10.69□□□□□ -0.7
ECHDC1-219ENST00000526299 ILDR1Q86SU0 546 aaPredicted RBP10.68□□□□□ -0.7
ECHDC1-219ENST00000526299 EMP3P54852 163 aa10.61□□□□□ -0.71
ECHDC1-219ENST00000526299 SPNS2Q8IVW8 549 aa10.6□□□□□ -0.71
ECHDC1-219ENST00000526299 BOLA1Q9Y3E2 137 aa10.6□□□□□ -0.71
ECHDC1-219ENST00000526299 MMRN1Q13201 1228 aa10.59□□□□□ -0.71
ECHDC1-219ENST00000526299 POTEB3A0JP26 581 aa10.58□□□□□ -0.72
ECHDC1-219ENST00000526299 POTEBQ6S5H4 581 aa10.58□□□□□ -0.72
ECHDC1-219ENST00000526299 G3V3G9 751 aa10.57□□□□□ -0.72
ECHDC1-219ENST00000526299 FAM205CA6NFA0 338 aa10.56□□□□□ -0.72
ECHDC1-219ENST00000526299 EFCAB3Q8N7B9 438 aa10.56□□□□□ -0.72
ECHDC1-219ENST00000526299 HS3ST6Q96QI5 342 aa10.55□□□□□ -0.72
ECHDC1-219ENST00000526299 HOXB3P14651 431 aaPredicted RBP10.53□□□□□ -0.72
ECHDC1-219ENST00000526299 TRIM41Q8WV44 630 aa10.53□□□□□ -0.72
ECHDC1-219ENST00000526299 KRTAP3-3Q9BYR6 98 aa10.51□□□□□ -0.73
ECHDC1-219ENST00000526299 KRTAP3-2Q9BYR7 98 aa10.51□□□□□ -0.73
ECHDC1-219ENST00000526299 ZNF710Q8N1W2 664 aa10.46□□□□□ -0.73
ECHDC1-219ENST00000526299 RNF25Q96BH1 459 aaPredicted RBP10.46□□□□□ -0.73
ECHDC1-219ENST00000526299 RIOK3O14730 519 aaKnown RBP10.44□□□□□ -0.74
ECHDC1-219ENST00000526299 HOXB1P14653 301 aaPredicted RBP10.44□□□□□ -0.74
ECHDC1-219ENST00000526299 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.43□□□□□ -0.74
ECHDC1-219ENST00000526299 DOK7Q18PE1 504 aa10.43□□□□□ -0.74
ECHDC1-219ENST00000526299 TMEM92Q6UXU6 159 aa10.43□□□□□ -0.74
ECHDC1-219ENST00000526299 MICALL2Q8IY33 904 aa10.43□□□□□ -0.74
ECHDC1-219ENST00000526299 ZFP91Q96JP5 570 aaPredicted RBP10.43□□□□□ -0.74
ECHDC1-219ENST00000526299 MS4A4AQ96JQ5 239 aa10.41□□□□□ -0.74
ECHDC1-219ENST00000526299 SOX12O15370 315 aa10.4□□□□□ -0.74
ECHDC1-219ENST00000526299 PHF8Q9UPP1 1060 aa10.4□□□□□ -0.74
ECHDC1-219ENST00000526299 VGFO15240 615 aaPredicted RBP10.39□□□□□ -0.75
ECHDC1-219ENST00000526299 ERBB3P21860 1342 aa10.38□□□□□ -0.75
ECHDC1-219ENST00000526299 RIMBP2O15034 1052 aa10.35□□□□□ -0.75
ECHDC1-219ENST00000526299 VARS2Q5ST30 1063 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms