RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 PELP1Q8IZL8 1130 aaKnown RBP8.31□□□□□ -1.08
TRAPPC4-207ENST00000526141 TSPYL2Q9H2G4 693 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC4-207ENST00000526141 ATMINO43313 823 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC4-207ENST00000526141 PLSCR2Q9NRY7 297 aa8.3□□□□□ -1.08
TRAPPC4-207ENST00000526141 METRNQ9UJH8 293 aa8.3□□□□□ -1.08
TRAPPC4-207ENST00000526141 MAMSTRQ6ZN01 415 aa8.29□□□□□ -1.08
TRAPPC4-207ENST00000526141 CCDC61Q9Y6R9 512 aa8.28□□□□□ -1.08
TRAPPC4-207ENST00000526141 MIER1Q8N108 512 aa8.26□□□□□ -1.09
TRAPPC4-207ENST00000526141 KIF12Q96FN5 646 aa8.24□□□□□ -1.09
TRAPPC4-207ENST00000526141 POTEMA6NI47 508 aa8.23□□□□□ -1.09
TRAPPC4-207ENST00000526141 ATN1P54259 1190 aaPredicted RBP8.21□□□□□ -1.1
TRAPPC4-207ENST00000526141 SCUBE2Q9NQ36 999 aa8.21□□□□□ -1.1
TRAPPC4-207ENST00000526141 POTEGQ6S5H5 508 aa8.2□□□□□ -1.1
TRAPPC4-207ENST00000526141 PCDH10Q9P2E7 1040 aa8.2□□□□□ -1.1
TRAPPC4-207ENST00000526141 TIE1P35590 1138 aa8.19□□□□□ -1.1
TRAPPC4-207ENST00000526141 ZBTB47Q9UFB7 747 aaPredicted RBP8.19□□□□□ -1.1
TRAPPC4-207ENST00000526141 PLCD3Q8N3E9 789 aa8.18□□□□□ -1.1
TRAPPC4-207ENST00000526141 MAP3K13O43283 966 aa8.17□□□□□ -1.1
TRAPPC4-207ENST00000526141 POTEJP0CG39 1038 aa8.17□□□□□ -1.1
TRAPPC4-207ENST00000526141 BMP2KQ9NSY1 1161 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC4-207ENST00000526141 RASEFQ8IZ41 740 aa8.16□□□□□ -1.1
TRAPPC4-207ENST00000526141 SGIP1Q9BQI5 828 aa8.15□□□□□ -1.1
TRAPPC4-207ENST00000526141 SEC24BO95487 1268 aa8.13□□□□□ -1.11
TRAPPC4-207ENST00000526141 TRPC6Q9Y210 931 aa8.12□□□□□ -1.11
TRAPPC4-207ENST00000526141 FAM163AQ96GL9 167 aaPredicted RBP8.11□□□□□ -1.11
TRAPPC4-207ENST00000526141 TTLL13PA6NNM8 815 aa8.1□□□□□ -1.11
TRAPPC4-207ENST00000526141 IER5LQ5T953 404 aa8.1□□□□□ -1.11
TRAPPC4-207ENST00000526141 PCDHB13Q9Y5F0 798 aa8.1□□□□□ -1.11
TRAPPC4-207ENST00000526141 POTEFA5A3E0 1075 aa8.09□□□□□ -1.11
TRAPPC4-207ENST00000526141 FAM212AQ96EL1 285 aa8.07□□□□□ -1.12
TRAPPC4-207ENST00000526141 TRIM35Q9UPQ4 493 aa8.07□□□□□ -1.12
TRAPPC4-207ENST00000526141 NUBP1P53384 320 aa8.06□□□□□ -1.12
TRAPPC4-207ENST00000526141 COLQQ9Y215 455 aaPredicted RBP8.04□□□□□ -1.12
TRAPPC4-207ENST00000526141 LCE2DQ5TA82 110 aaPredicted RBP8.02□□□□□ -1.13
TRAPPC4-207ENST00000526141 IFNL1Q8IU54 200 aa8.02□□□□□ -1.13
TRAPPC4-207ENST00000526141 TMEM106CQ9BVX2 250 aa8.01□□□□□ -1.13
TRAPPC4-207ENST00000526141 PLCG2P16885 1265 aa7.99□□□□□ -1.13
TRAPPC4-207ENST00000526141 FKBP8Q14318 412 aa7.99□□□□□ -1.13
TRAPPC4-207ENST00000526141 FBXO3Q9UK99 471 aa7.97□□□□□ -1.13
TRAPPC4-207ENST00000526141 DCAF8Q5TAQ9 597 aa7.96□□□□□ -1.14
TRAPPC4-207ENST00000526141 SLAIN1Q8ND83 568 aa7.96□□□□□ -1.14
TRAPPC4-207ENST00000526141 IRX5P78411 483 aaPredicted RBP7.93□□□□□ -1.14
TRAPPC4-207ENST00000526141 OCEL1Q9H607 264 aa7.93□□□□□ -1.14
TRAPPC4-207ENST00000526141 CDAN1Q8IWY9 1227 aa7.92□□□□□ -1.14
TRAPPC4-207ENST00000526141 PYGBP11216 843 aa7.91□□□□□ -1.14
TRAPPC4-207ENST00000526141 SNPHO15079 494 aa7.9□□□□□ -1.14
TRAPPC4-207ENST00000526141 ST18O60284 1047 aa7.89□□□□□ -1.15
TRAPPC4-207ENST00000526141 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.88□□□□□ -1.15
TRAPPC4-207ENST00000526141 GSE1Q14687 1217 aa7.87□□□□□ -1.15
TRAPPC4-207ENST00000526141 TMEM121BQ9BXQ6 578 aaPredicted RBP7.87□□□□□ -1.15
TRAPPC4-207ENST00000526141 ZNF467Q7Z7K2 595 aaPredicted RBP7.86□□□□□ -1.15
TRAPPC4-207ENST00000526141 PCDHB8Q9UN66 801 aa7.86□□□□□ -1.15
TRAPPC4-207ENST00000526141 GOLGA2Q08379 1002 aa7.85□□□□□ -1.15
TRAPPC4-207ENST00000526141 KLHL34Q8N239 644 aa7.85□□□□□ -1.15
TRAPPC4-207ENST00000526141 MKRN3Q13064 507 aaKnown RBP7.82□□□□□ -1.16
TRAPPC4-207ENST00000526141 L3MBTL3Q96JM7 780 aaPredicted RBP7.82□□□□□ -1.16
TRAPPC4-207ENST00000526141 CHRM1P11229 460 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC4-207ENST00000526141 VASPP50552 380 aaPredicted RBP7.8□□□□□ -1.16
TRAPPC4-207ENST00000526141 C3orf67Q6ZVT6 689 aa7.8□□□□□ -1.16
TRAPPC4-207ENST00000526141 PDCD7Q8N8D1 485 aaKnown RBP7.77□□□□□ -1.17
TRAPPC4-207ENST00000526141 PSEN1P49768 467 aa7.76□□□□□ -1.17
TRAPPC4-207ENST00000526141 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.76□□□□□ -1.17
TRAPPC4-207ENST00000526141 PDAP1Q13442 181 aaKnown RBP7.72□□□□□ -1.17
TRAPPC4-207ENST00000526141 SPNS2Q8IVW8 549 aa7.72□□□□□ -1.17
TRAPPC4-207ENST00000526141 MARVELD3Q96A59 401 aa7.72□□□□□ -1.17
TRAPPC4-207ENST00000526141 G3V3G9 751 aa7.71□□□□□ -1.18
TRAPPC4-207ENST00000526141 EMP3P54852 163 aa7.71□□□□□ -1.18
TRAPPC4-207ENST00000526141 MMRN1Q13201 1228 aa7.71□□□□□ -1.18
TRAPPC4-207ENST00000526141 SPOCK2Q92563 424 aa7.69□□□□□ -1.18
TRAPPC4-207ENST00000526141 ILDR1Q86SU0 546 aaPredicted RBP7.68□□□□□ -1.18
TRAPPC4-207ENST00000526141 CIZ1Q9ULV3 898 aaPredicted RBP7.67□□□□□ -1.18
TRAPPC4-207ENST00000526141 CABP2Q9NPB3 220 aa7.65□□□□□ -1.18
TRAPPC4-207ENST00000526141 BOLA1Q9Y3E2 137 aa7.64□□□□□ -1.19
TRAPPC4-207ENST00000526141 FAM205CA6NFA0 338 aa7.63□□□□□ -1.19
TRAPPC4-207ENST00000526141 HS3ST6Q96QI5 342 aa7.63□□□□□ -1.19
TRAPPC4-207ENST00000526141 DPY19L2Q6NUT2 758 aa7.62□□□□□ -1.19
TRAPPC4-207ENST00000526141 IFNLR1Q8IU57 520 aaPredicted RBP7.62□□□□□ -1.19
TRAPPC4-207ENST00000526141 TRIM41Q8WV44 630 aa7.61□□□□□ -1.19
TRAPPC4-207ENST00000526141 ZNF710Q8N1W2 664 aa7.6□□□□□ -1.19
TRAPPC4-207ENST00000526141 DOK7Q18PE1 504 aa7.59□□□□□ -1.19
TRAPPC4-207ENST00000526141 RIMBP2O15034 1052 aa7.58□□□□□ -1.2
TRAPPC4-207ENST00000526141 KRTAP3-3Q9BYR6 98 aa7.58□□□□□ -1.2
TRAPPC4-207ENST00000526141 KRTAP3-2Q9BYR7 98 aa7.58□□□□□ -1.2
TRAPPC4-207ENST00000526141 POTEB3A0JP26 581 aa7.57□□□□□ -1.2
TRAPPC4-207ENST00000526141 POTEBQ6S5H4 581 aa7.57□□□□□ -1.2
TRAPPC4-207ENST00000526141 HOXB3P14651 431 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC4-207ENST00000526141 HOXB1P14653 301 aaPredicted RBP7.56□□□□□ -1.2
TRAPPC4-207ENST00000526141 ERBB3P21860 1342 aa7.54□□□□□ -1.2
TRAPPC4-207ENST00000526141 EFCAB3Q8N7B9 438 aa7.52□□□□□ -1.21
TRAPPC4-207ENST00000526141 ZSWIM6Q9HCJ5 1215 aa7.51□□□□□ -1.21
TRAPPC4-207ENST00000526141 SOX12O15370 315 aa7.5□□□□□ -1.21
TRAPPC4-207ENST00000526141 MICALL2Q8IY33 904 aa7.48□□□□□ -1.21
TRAPPC4-207ENST00000526141 RIOK3O14730 519 aaKnown RBP7.47□□□□□ -1.21
TRAPPC4-207ENST00000526141 VARS2Q5ST30 1063 aaKnown RBP7.46□□□□□ -1.22
TRAPPC4-207ENST00000526141 VGFO15240 615 aaPredicted RBP7.45□□□□□ -1.22
TRAPPC4-207ENST00000526141 ZNF687Q8N1G0 1237 aa7.44□□□□□ -1.22
TRAPPC4-207ENST00000526141 RNF166Q96A37 237 aaPredicted RBP7.44□□□□□ -1.22
TRAPPC4-207ENST00000526141 TAOK2Q9UL54 1235 aa7.43□□□□□ -1.22
TRAPPC4-207ENST00000526141 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC4-207ENST00000526141 PTGER2P43116 358 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms