RNA–Protein interactions for RNA: ENST00000525359.1

CLNS1A-203, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-203ENST00000525359 SP7Q8TDD2 431 aaPredicted RBP8.04□□□□□ -1.12
CLNS1A-203ENST00000525359 ZNF579Q8NAF0 562 aaKnown RBP8.03□□□□□ -1.12
CLNS1A-203ENST00000525359 CIZ1Q9ULV3 898 aaPredicted RBP8.01□□□□□ -1.13
CLNS1A-203ENST00000525359 EVX2Q03828 476 aa8□□□□□ -1.13
CLNS1A-203ENST00000525359 TRIM41Q8WV44 630 aa7.97□□□□□ -1.13
CLNS1A-203ENST00000525359 CCDC61Q9Y6R9 512 aa7.97□□□□□ -1.13
CLNS1A-203ENST00000525359 PHF12Q96QT6 1004 aa7.96□□□□□ -1.14
CLNS1A-203ENST00000525359 GABBR2O75899 941 aa7.92□□□□□ -1.14
CLNS1A-203ENST00000525359 SGIP1Q9BQI5 828 aa7.92□□□□□ -1.14
CLNS1A-203ENST00000525359 KIF12Q96FN5 646 aa7.91□□□□□ -1.14
CLNS1A-203ENST00000525359 PYGBP11216 843 aa7.9□□□□□ -1.14
CLNS1A-203ENST00000525359 PCDHB13Q9Y5F0 798 aa7.9□□□□□ -1.14
CLNS1A-203ENST00000525359 CHRM1P11229 460 aaPredicted RBP7.89□□□□□ -1.15
CLNS1A-203ENST00000525359 MAP3K13O43283 966 aa7.88□□□□□ -1.15
CLNS1A-203ENST00000525359 ZNF467Q7Z7K2 595 aaPredicted RBP7.88□□□□□ -1.15
CLNS1A-203ENST00000525359 DCBLD2Q96PD2 775 aa7.88□□□□□ -1.15
CLNS1A-203ENST00000525359 MS4A3Q96HJ5 214 aa7.86□□□□□ -1.15
CLNS1A-203ENST00000525359 GALR2O43603 387 aaPredicted RBP7.85□□□□□ -1.15
CLNS1A-203ENST00000525359 TAOK2Q9UL54 1235 aa7.84□□□□□ -1.15
CLNS1A-203ENST00000525359 ECM2O94769 699 aaPredicted RBP7.83□□□□□ -1.16
CLNS1A-203ENST00000525359 IFNL1Q8IU54 200 aa7.81□□□□□ -1.16
CLNS1A-203ENST00000525359 TIE1P35590 1138 aa7.8□□□□□ -1.16
CLNS1A-203ENST00000525359 AMER1Q5JTC6 1135 aaPredicted RBP7.79□□□□□ -1.16
CLNS1A-203ENST00000525359 RIOK3O14730 519 aaKnown RBP7.78□□□□□ -1.16
CLNS1A-203ENST00000525359 PDAP1Q13442 181 aaKnown RBP7.78□□□□□ -1.16
CLNS1A-203ENST00000525359 PKD2Q13563 968 aa7.78□□□□□ -1.16
CLNS1A-203ENST00000525359 PCDHB8Q9UN66 801 aa7.78□□□□□ -1.16
CLNS1A-203ENST00000525359 PSEN1P49768 467 aa7.75□□□□□ -1.17
CLNS1A-203ENST00000525359 GOLGA2Q08379 1002 aa7.75□□□□□ -1.17
CLNS1A-203ENST00000525359 TMEM106CQ9BVX2 250 aa7.75□□□□□ -1.17
CLNS1A-203ENST00000525359 VGFO15240 615 aaPredicted RBP7.74□□□□□ -1.17
CLNS1A-203ENST00000525359 ASTLQ6HA08 431 aaPredicted RBP7.74□□□□□ -1.17
CLNS1A-203ENST00000525359 TTLL13PA6NNM8 815 aa7.73□□□□□ -1.17
CLNS1A-203ENST00000525359 ATMINO43313 823 aaPredicted RBP7.73□□□□□ -1.17
CLNS1A-203ENST00000525359 BMP2KQ9NSY1 1161 aaPredicted RBP7.73□□□□□ -1.17
CLNS1A-203ENST00000525359 SLC39A7Q92504 469 aa7.71□□□□□ -1.18
CLNS1A-203ENST00000525359 TRPC6Q9Y210 931 aa7.71□□□□□ -1.18
CLNS1A-203ENST00000525359 RGL2O15211 777 aa7.69□□□□□ -1.18
CLNS1A-203ENST00000525359 C7P10643 843 aa7.69□□□□□ -1.18
CLNS1A-203ENST00000525359 ATN1P54259 1190 aaPredicted RBP7.69□□□□□ -1.18
CLNS1A-203ENST00000525359 RNF25Q96BH1 459 aaPredicted RBP7.69□□□□□ -1.18
CLNS1A-203ENST00000525359 TRIM35Q9UPQ4 493 aa7.69□□□□□ -1.18
CLNS1A-203ENST00000525359 DCAF8L2P0C7V8 631 aa7.68□□□□□ -1.18
CLNS1A-203ENST00000525359 POTEIP0CG38 1075 aa7.68□□□□□ -1.18
CLNS1A-203ENST00000525359 MKRN3Q13064 507 aaKnown RBP7.68□□□□□ -1.18
CLNS1A-203ENST00000525359 IER5LQ5T953 404 aa7.68□□□□□ -1.18
CLNS1A-203ENST00000525359 SEC24BO95487 1268 aa7.67□□□□□ -1.18
CLNS1A-203ENST00000525359 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.66□□□□□ -1.18
CLNS1A-203ENST00000525359 ZFP91Q96JP5 570 aaPredicted RBP7.66□□□□□ -1.18
CLNS1A-203ENST00000525359 RTN4Q9NQC3 1192 aaKnown RBP7.66□□□□□ -1.18
CLNS1A-203ENST00000525359 STK25O00506 426 aa7.65□□□□□ -1.18
CLNS1A-203ENST00000525359 CABP2Q9NPB3 220 aa7.65□□□□□ -1.18
CLNS1A-203ENST00000525359 METRNQ9UJH8 293 aa7.65□□□□□ -1.18
CLNS1A-203ENST00000525359 PLCG2P16885 1265 aa7.63□□□□□ -1.19
CLNS1A-203ENST00000525359 PELP1Q8IZL8 1130 aaKnown RBP7.63□□□□□ -1.19
CLNS1A-203ENST00000525359 BCL11BQ9C0K0 894 aaPredicted RBP7.63□□□□□ -1.19
CLNS1A-203ENST00000525359 STK24Q9Y6E0 443 aa7.63□□□□□ -1.19
CLNS1A-203ENST00000525359 CHGAP10645 457 aaKnown RBP7.6□□□□□ -1.19
CLNS1A-203ENST00000525359 OCEL1Q9H607 264 aa7.59□□□□□ -1.19
CLNS1A-203ENST00000525359 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.59□□□□□ -1.194e-9■■□□□ 14.2
CLNS1A-203ENST00000525359 SOX12O15370 315 aa7.58□□□□□ -1.2
CLNS1A-203ENST00000525359 HS6ST3Q8IZP7 471 aa7.58□□□□□ -1.2
CLNS1A-203ENST00000525359 EFCAB3Q8N7B9 438 aa7.57□□□□□ -1.2
CLNS1A-203ENST00000525359 G3V3G9 751 aa7.56□□□□□ -1.2
CLNS1A-203ENST00000525359 IRX5P78411 483 aaPredicted RBP7.55□□□□□ -1.2
CLNS1A-203ENST00000525359 LHX8Q68G74 356 aa7.55□□□□□ -1.2
CLNS1A-203ENST00000525359 MAMSTRQ6ZN01 415 aa7.55□□□□□ -1.2
CLNS1A-203ENST00000525359 RYDENQ9NUL5 291 aaKnown RBP7.55□□□□□ -1.2
CLNS1A-203ENST00000525359 NLRP6P59044 892 aa7.54□□□□□ -1.2
CLNS1A-203ENST00000525359 L3MBTL3Q96JM7 780 aaPredicted RBP7.54□□□□□ -1.2
CLNS1A-203ENST00000525359 COLQQ9Y215 455 aaPredicted RBP7.53□□□□□ -1.2
CLNS1A-203ENST00000525359 SCUBE2Q9NQ36 999 aa7.51□□□□□ -1.21
CLNS1A-203ENST00000525359 PDCD7Q8N8D1 485 aaKnown RBP7.49□□□□□ -1.21
CLNS1A-203ENST00000525359 POTEFA5A3E0 1075 aa7.48□□□□□ -1.21
CLNS1A-203ENST00000525359 ILDR1Q86SU0 546 aaPredicted RBP7.48□□□□□ -1.21
CLNS1A-203ENST00000525359 DNAJC5Q9H3Z4 198 aa7.48□□□□□ -1.21
CLNS1A-203ENST00000525359 PHF8Q9UPP1 1060 aa7.48□□□□□ -1.21
CLNS1A-203ENST00000525359 C3orf67Q6ZVT6 689 aa7.47□□□□□ -1.21
CLNS1A-203ENST00000525359 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.47□□□□□ -1.21
CLNS1A-203ENST00000525359 MFRPQ9BY79 579 aa7.46□□□□□ -1.22
CLNS1A-203ENST00000525359 BBXQ8WY36 941 aaPredicted RBP7.45□□□□□ -1.22
CLNS1A-203ENST00000525359 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.45□□□□□ -1.22
CLNS1A-203ENST00000525359 BOLA1Q9Y3E2 137 aa7.45□□□□□ -1.22
CLNS1A-203ENST00000525359 POTEB2H3BUK9 544 aa7.43□□□□□ -1.22
CLNS1A-203ENST00000525359 FBXO22Q8NEZ5 403 aa7.43□□□□□ -1.22
CLNS1A-203ENST00000525359 DPY19L2Q6NUT2 758 aa7.42□□□□□ -1.22
CLNS1A-203ENST00000525359 MS4A4AQ96JQ5 239 aa7.41□□□□□ -1.22
CLNS1A-203ENST00000525359 NKX1-1Q15270 411 aaPredicted RBP7.39□□□□□ -1.23
CLNS1A-203ENST00000525359 MICALL2Q8IY33 904 aa7.39□□□□□ -1.23
CLNS1A-203ENST00000525359 POTEJP0CG39 1038 aa7.38□□□□□ -1.23
CLNS1A-203ENST00000525359 SLAIN1Q8ND83 568 aa7.38□□□□□ -1.23
CLNS1A-203ENST00000525359 OTUD5Q96G74 571 aa7.38□□□□□ -1.23
CLNS1A-203ENST00000525359 SPRYD3Q8NCJ5 442 aa7.37□□□□□ -1.23
CLNS1A-203ENST00000525359 TMEM121BQ9BXQ6 578 aaPredicted RBP7.37□□□□□ -1.23
CLNS1A-203ENST00000525359 GTPBP6O43824 516 aaPredicted RBP7.35□□□□□ -1.23
CLNS1A-203ENST00000525359 SNPHO15079 494 aa7.34□□□□□ -1.23
CLNS1A-203ENST00000525359 PPP1R37O75864 691 aa7.32□□□□□ -1.24
CLNS1A-203ENST00000525359 PAXIP1Q6ZW49 1069 aaPredicted RBP7.32□□□□□ -1.24
CLNS1A-203ENST00000525359 TMC2Q8TDI7 906 aa7.32□□□□□ -1.24
CLNS1A-203ENST00000525359 CFAP44Q96MT7 982 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms