RNA–Protein interactions for RNA: ENST00000525323.1

RNPC3-204, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 3

Gene RNPC3, Length 432 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-204ENST00000525323 CCDC61Q9Y6R9 512 aa13.17□□□□□ -0.3
RNPC3-204ENST00000525323 DCAF8Q5TAQ9 597 aa13.15□□□□□ -0.3
RNPC3-204ENST00000525323 PHF12Q96QT6 1004 aa13.14□□□□□ -0.31
RNPC3-204ENST00000525323 GABBR2O75899 941 aa13.12□□□□□ -0.31
RNPC3-204ENST00000525323 CLCN6P51797 869 aa13.09□□□□□ -0.31
RNPC3-204ENST00000525323 GSE1Q14687 1217 aa13.09□□□□□ -0.31
RNPC3-204ENST00000525323 KIF12Q96FN5 646 aa13.05□□□□□ -0.32
RNPC3-204ENST00000525323 CIZ1Q9ULV3 898 aaPredicted RBP13.05□□□□□ -0.32
RNPC3-204ENST00000525323 GALR2O43603 387 aaPredicted RBP13.01□□□□□ -0.33
RNPC3-204ENST00000525323 PYGBP11216 843 aa13.01□□□□□ -0.33
RNPC3-204ENST00000525323 MAP3K13O43283 966 aa13□□□□□ -0.33
RNPC3-204ENST00000525323 MS4A3Q96HJ5 214 aa12.98□□□□□ -0.33
RNPC3-204ENST00000525323 CHRM1P11229 460 aaPredicted RBP12.95□□□□□ -0.34
RNPC3-204ENST00000525323 SGIP1Q9BQI5 828 aa12.95□□□□□ -0.34
RNPC3-204ENST00000525323 PCDHB13Q9Y5F0 798 aa12.93□□□□□ -0.34
RNPC3-204ENST00000525323 IFNL1Q8IU54 200 aa12.89□□□□□ -0.35
RNPC3-204ENST00000525323 TRIM41Q8WV44 630 aa12.89□□□□□ -0.35
RNPC3-204ENST00000525323 POTEIP0CG38 1075 aa12.86□□□□□ -0.35
RNPC3-204ENST00000525323 PKD2Q13563 968 aa12.86□□□□□ -0.35
RNPC3-204ENST00000525323 DCBLD2Q96PD2 775 aa12.86□□□□□ -0.35
RNPC3-204ENST00000525323 TRPC6Q9Y210 931 aa12.86□□□□□ -0.35
RNPC3-204ENST00000525323 PCDHB8Q9UN66 801 aa12.84□□□□□ -0.35
RNPC3-204ENST00000525323 ZNF467Q7Z7K2 595 aaPredicted RBP12.81□□□□□ -0.36
RNPC3-204ENST00000525323 ECM2O94769 699 aaPredicted RBP12.79□□□□□ -0.36
RNPC3-204ENST00000525323 TIE1P35590 1138 aa12.78□□□□□ -0.36
RNPC3-204ENST00000525323 BMP2KQ9NSY1 1161 aaPredicted RBP12.78□□□□□ -0.36
RNPC3-204ENST00000525323 ATMINO43313 823 aaPredicted RBP12.77□□□□□ -0.37
RNPC3-204ENST00000525323 ASTLQ6HA08 431 aaPredicted RBP12.77□□□□□ -0.37
RNPC3-204ENST00000525323 RNF25Q96BH1 459 aaPredicted RBP12.75□□□□□ -0.37
RNPC3-204ENST00000525323 TTLL13PA6NNM8 815 aa12.74□□□□□ -0.37
RNPC3-204ENST00000525323 ATN1P54259 1190 aaPredicted RBP12.73□□□□□ -0.37
RNPC3-204ENST00000525323 PELP1Q8IZL8 1130 aaKnown RBP12.72□□□□□ -0.37
RNPC3-204ENST00000525323 TMEM106CQ9BVX2 250 aa12.72□□□□□ -0.37
RNPC3-204ENST00000525323 RIOK3O14730 519 aaKnown RBP12.7□□□□□ -0.38
RNPC3-204ENST00000525323 PSEN1P49768 467 aa12.7□□□□□ -0.38
RNPC3-204ENST00000525323 RGL2O15211 777 aa12.69□□□□□ -0.38
RNPC3-204ENST00000525323 PDAP1Q13442 181 aaKnown RBP12.69□□□□□ -0.38
RNPC3-204ENST00000525323 TRIM35Q9UPQ4 493 aa12.65□□□□□ -0.38
RNPC3-204ENST00000525323 VGFO15240 615 aaPredicted RBP12.63□□□□□ -0.39
RNPC3-204ENST00000525323 AMER1Q5JTC6 1135 aaPredicted RBP12.61□□□□□ -0.39
RNPC3-204ENST00000525323 SLC39A7Q92504 469 aa12.61□□□□□ -0.39
RNPC3-204ENST00000525323 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.59□□□□□ -0.39
RNPC3-204ENST00000525323 C7P10643 843 aa12.59□□□□□ -0.39
RNPC3-204ENST00000525323 ZFP91Q96JP5 570 aaPredicted RBP12.59□□□□□ -0.39
RNPC3-204ENST00000525323 RTN4Q9NQC3 1192 aaKnown RBP12.59□□□□□ -0.39
RNPC3-204ENST00000525323 TAOK2Q9UL54 1235 aa12.59□□□□□ -0.39
RNPC3-204ENST00000525323 METRNQ9UJH8 293 aa12.57□□□□□ -0.4
RNPC3-204ENST00000525323 IER5LQ5T953 404 aa12.55□□□□□ -0.4
RNPC3-204ENST00000525323 CABP2Q9NPB3 220 aa12.54□□□□□ -0.4
RNPC3-204ENST00000525323 GOLGA2Q08379 1002 aa12.52□□□□□ -0.41
RNPC3-204ENST00000525323 POTEFA5A3E0 1075 aa12.5□□□□□ -0.41
RNPC3-204ENST00000525323 MKRN3Q13064 507 aaKnown RBP12.5□□□□□ -0.41
RNPC3-204ENST00000525323 BCL11BQ9C0K0 894 aaPredicted RBP12.5□□□□□ -0.41
RNPC3-204ENST00000525323 STK25O00506 426 aa12.48□□□□□ -0.41
RNPC3-204ENST00000525323 SEC24BO95487 1268 aa12.48□□□□□ -0.41
RNPC3-204ENST00000525323 IRX5P78411 483 aaPredicted RBP12.48□□□□□ -0.41
RNPC3-204ENST00000525323 COLQQ9Y215 455 aaPredicted RBP12.48□□□□□ -0.41
RNPC3-204ENST00000525323 STK24Q9Y6E0 443 aa12.48□□□□□ -0.41
RNPC3-204ENST00000525323 EFCAB3Q8N7B9 438 aa12.46□□□□□ -0.41
RNPC3-204ENST00000525323 POTEB2H3BUK9 544 aa12.45□□□□□ -0.42
RNPC3-204ENST00000525323 LHX8Q68G74 356 aa12.45□□□□□ -0.42
RNPC3-204ENST00000525323 OCEL1Q9H607 264 aa12.44□□□□□ -0.42
RNPC3-204ENST00000525323 PLCG2P16885 1265 aa12.43□□□□□ -0.42
RNPC3-204ENST00000525323 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.42
RNPC3-204ENST00000525323 DCAF8L2P0C7V8 631 aa12.4□□□□□ -0.42
RNPC3-204ENST00000525323 CHGAP10645 457 aaKnown RBP12.4□□□□□ -0.42
RNPC3-204ENST00000525323 ILDR1Q86SU0 546 aaPredicted RBP12.4□□□□□ -0.42
RNPC3-204ENST00000525323 HS6ST3Q8IZP7 471 aa12.4□□□□□ -0.42
RNPC3-204ENST00000525323 SOX12O15370 315 aa12.38□□□□□ -0.43
RNPC3-204ENST00000525323 PDCD7Q8N8D1 485 aaKnown RBP12.38□□□□□ -0.43
RNPC3-204ENST00000525323 POTEJP0CG39 1038 aa12.37□□□□□ -0.43
RNPC3-204ENST00000525323 PHF8Q9UPP1 1060 aa12.33□□□□□ -0.44
RNPC3-204ENST00000525323 DPY19L2Q6NUT2 758 aa12.32□□□□□ -0.44
RNPC3-204ENST00000525323 MFRPQ9BY79 579 aa12.31□□□□□ -0.44
RNPC3-204ENST00000525323 DNAJC5Q9H3Z4 198 aa12.3□□□□□ -0.44
RNPC3-204ENST00000525323 NLRP6P59044 892 aa12.29□□□□□ -0.44
RNPC3-204ENST00000525323 MS4A4AQ96JQ5 239 aa12.29□□□□□ -0.44
RNPC3-204ENST00000525323 FBXO22Q8NEZ5 403 aa12.28□□□□□ -0.44
RNPC3-204ENST00000525323 OTUD5Q96G74 571 aa12.28□□□□□ -0.44
RNPC3-204ENST00000525323 L3MBTL3Q96JM7 780 aaPredicted RBP12.26□□□□□ -0.45
RNPC3-204ENST00000525323 NKX1-1Q15270 411 aaPredicted RBP12.25□□□□□ -0.45
RNPC3-204ENST00000525323 MAMSTRQ6ZN01 415 aa12.25□□□□□ -0.45
RNPC3-204ENST00000525323 SCUBE2Q9NQ36 999 aa12.22□□□□□ -0.45
RNPC3-204ENST00000525323 BOLA1Q9Y3E2 137 aa12.21□□□□□ -0.45
RNPC3-204ENST00000525323 TMEM121BQ9BXQ6 578 aaPredicted RBP12.17□□□□□ -0.46
RNPC3-204ENST00000525323 G3V3G9 751 aa12.16□□□□□ -0.46
RNPC3-204ENST00000525323 PPP1R37O75864 691 aa12.14□□□□□ -0.47
RNPC3-204ENST00000525323 MICALL2Q8IY33 904 aa12.14□□□□□ -0.47
RNPC3-204ENST00000525323 BBXQ8WY36 941 aaPredicted RBP12.14□□□□□ -0.47
RNPC3-204ENST00000525323 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.14□□□□□ -0.47
RNPC3-204ENST00000525323 C3orf67Q6ZVT6 689 aa12.13□□□□□ -0.47
RNPC3-204ENST00000525323 GTPBP6O43824 516 aaPredicted RBP12.12□□□□□ -0.47
RNPC3-204ENST00000525323 RYDENQ9NUL5 291 aaKnown RBP12.11□□□□□ -0.47
RNPC3-204ENST00000525323 SLAIN1Q8ND83 568 aa12.1□□□□□ -0.47
RNPC3-204ENST00000525323 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.03□□□□□ -0.48
RNPC3-204ENST00000525323 TMEM92Q6UXU6 159 aa12.02□□□□□ -0.49
RNPC3-204ENST00000525323 SPRYD3Q8NCJ5 442 aa11.98□□□□□ -0.49
RNPC3-204ENST00000525323 PAXIP1Q6ZW49 1069 aaPredicted RBP11.95□□□□□ -0.5
RNPC3-204ENST00000525323 CFAP44Q96MT7 982 aa11.94□□□□□ -0.5
RNPC3-204ENST00000525323 KIF3CO14782 793 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms