RNA–Protein interactions for RNA: ENST00000525107.6

LMO7-215, Transcript of LIM domain 7, humanhuman

TSL 5

Gene LMO7, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-215ENST00000525107 ATMINO43313 823 aaPredicted RBP13.57□□□□□ -0.24
LMO7-215ENST00000525107 C7P10643 843 aa13.57□□□□□ -0.24
LMO7-215ENST00000525107 SLC39A7Q92504 469 aa13.57□□□□□ -0.24
LMO7-215ENST00000525107 MNX1P50219 401 aaPredicted RBP13.55□□□□□ -0.24
LMO7-215ENST00000525107 MS4A3Q96HJ5 214 aa13.55□□□□□ -0.24
LMO7-215ENST00000525107 MAMSTRQ6ZN01 415 aa13.54□□□□□ -0.24
LMO7-215ENST00000525107 NPM1P06748 294 aaKnown RBP eCLIP13.53□□□□□ -0.24
LMO7-215ENST00000525107 FAM163AQ96GL9 167 aaPredicted RBP13.53□□□□□ -0.24
LMO7-215ENST00000525107 SCUBE2Q9NQ36 999 aa13.43□□□□□ -0.26
LMO7-215ENST00000525107 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
LMO7-215ENST00000525107 ATN1P54259 1190 aaPredicted RBP13.4□□□□□ -0.26
LMO7-215ENST00000525107 POTEFA5A3E0 1075 aa13.36□□□□□ -0.27
LMO7-215ENST00000525107 TSPYL2Q9H2G4 693 aaPredicted RBP13.3□□□□□ -0.28
LMO7-215ENST00000525107 CCDC61Q9Y6R9 512 aa13.29□□□□□ -0.28
LMO7-215ENST00000525107 CDAN1Q8IWY9 1227 aa13.27□□□□□ -0.29
LMO7-215ENST00000525107 BMP2KQ9NSY1 1161 aaPredicted RBP13.27□□□□□ -0.29
LMO7-215ENST00000525107 KIF12Q96FN5 646 aa13.26□□□□□ -0.29
LMO7-215ENST00000525107 TRPC6Q9Y210 931 aa13.25□□□□□ -0.29
LMO7-215ENST00000525107 COLQQ9Y215 455 aaPredicted RBP13.19□□□□□ -0.3
LMO7-215ENST00000525107 TIE1P35590 1138 aa13.16□□□□□ -0.3
LMO7-215ENST00000525107 MAP3K13O43283 966 aa13.14□□□□□ -0.31
LMO7-215ENST00000525107 SEC24BO95487 1268 aa13.12□□□□□ -0.31
LMO7-215ENST00000525107 TTLL13PA6NNM8 815 aa13.1□□□□□ -0.31
LMO7-215ENST00000525107 ST18O60284 1047 aa13.08□□□□□ -0.32
LMO7-215ENST00000525107 SLAIN1Q8ND83 568 aa13.03□□□□□ -0.32
LMO7-215ENST00000525107 MMRN1Q13201 1228 aa13.01□□□□□ -0.33
LMO7-215ENST00000525107 IER5LQ5T953 404 aa13.01□□□□□ -0.33
LMO7-215ENST00000525107 RASEFQ8IZ41 740 aa13.01□□□□□ -0.33
LMO7-215ENST00000525107 TRIM35Q9UPQ4 493 aa13□□□□□ -0.33
LMO7-215ENST00000525107 PROM2Q8N271 834 aa12.99□□□□□ -0.33
LMO7-215ENST00000525107 SPNS2Q8IVW8 549 aa12.98□□□□□ -0.33
LMO7-215ENST00000525107 SGIP1Q9BQI5 828 aa12.89□□□□□ -0.35
LMO7-215ENST00000525107 PCDHB13Q9Y5F0 798 aa12.89□□□□□ -0.35
LMO7-215ENST00000525107 MIER1Q8N108 512 aa12.87□□□□□ -0.35
LMO7-215ENST00000525107 TMEM121BQ9BXQ6 578 aaPredicted RBP12.85□□□□□ -0.35
LMO7-215ENST00000525107 PLEKHG5O94827 1062 aa12.84□□□□□ -0.35
LMO7-215ENST00000525107 PLCG2P16885 1265 aa12.83□□□□□ -0.36
LMO7-215ENST00000525107 IFNL1Q8IU54 200 aa12.82□□□□□ -0.36
LMO7-215ENST00000525107 TMEM106CQ9BVX2 250 aa12.81□□□□□ -0.36
LMO7-215ENST00000525107 IRX5P78411 483 aaPredicted RBP12.8□□□□□ -0.36
LMO7-215ENST00000525107 MARVELD3Q96A59 401 aa12.8□□□□□ -0.36
LMO7-215ENST00000525107 SNPHO15079 494 aa12.74□□□□□ -0.37
LMO7-215ENST00000525107 NUBP1P53384 320 aa12.72□□□□□ -0.37
LMO7-215ENST00000525107 OCEL1Q9H607 264 aa12.71□□□□□ -0.37
LMO7-215ENST00000525107 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.69□□□□□ -0.38
LMO7-215ENST00000525107 PLCD3Q8N3E9 789 aa12.66□□□□□ -0.38
LMO7-215ENST00000525107 KRTAP3-3Q9BYR6 98 aa12.62□□□□□ -0.39
LMO7-215ENST00000525107 KRTAP3-2Q9BYR7 98 aa12.62□□□□□ -0.39
LMO7-215ENST00000525107 POTEB3A0JP26 581 aa12.61□□□□□ -0.39
LMO7-215ENST00000525107 EMP3P54852 163 aa12.61□□□□□ -0.39
LMO7-215ENST00000525107 POTEBQ6S5H4 581 aa12.61□□□□□ -0.39
LMO7-215ENST00000525107 FAM212AQ96EL1 285 aa12.59□□□□□ -0.39
LMO7-215ENST00000525107 ZBTB47Q9UFB7 747 aaPredicted RBP12.58□□□□□ -0.4
LMO7-215ENST00000525107 HS3ST6Q96QI5 342 aa12.56□□□□□ -0.4
LMO7-215ENST00000525107 FAM205CA6NFA0 338 aa12.52□□□□□ -0.41
LMO7-215ENST00000525107 PDCD7Q8N8D1 485 aaKnown RBP12.51□□□□□ -0.41
LMO7-215ENST00000525107 FKBP8Q14318 412 aa12.49□□□□□ -0.41
LMO7-215ENST00000525107 C3orf67Q6ZVT6 689 aa12.49□□□□□ -0.41
LMO7-215ENST00000525107 PCDHB8Q9UN66 801 aa12.49□□□□□ -0.41
LMO7-215ENST00000525107 PYGBP11216 843 aa12.47□□□□□ -0.41
LMO7-215ENST00000525107 L3MBTL3Q96JM7 780 aaPredicted RBP12.43□□□□□ -0.42
LMO7-215ENST00000525107 DCAF8Q5TAQ9 597 aa12.41□□□□□ -0.42
LMO7-215ENST00000525107 MKRN3Q13064 507 aaKnown RBP12.34□□□□□ -0.43
LMO7-215ENST00000525107 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.32□□□□□ -0.442e-8■□□□□ 10.6
LMO7-215ENST00000525107 GOLGA2Q08379 1002 aa12.31□□□□□ -0.44
LMO7-215ENST00000525107 HOXB3P14651 431 aaPredicted RBP12.3□□□□□ -0.44
LMO7-215ENST00000525107 RNF166Q96A37 237 aaPredicted RBP12.29□□□□□ -0.44
LMO7-215ENST00000525107 HOXB1P14653 301 aaPredicted RBP12.25□□□□□ -0.45
LMO7-215ENST00000525107 ILDR1Q86SU0 546 aaPredicted RBP12.25□□□□□ -0.45
LMO7-215ENST00000525107 DPY19L2Q6NUT2 758 aa12.24□□□□□ -0.45
LMO7-215ENST00000525107 ZNF467Q7Z7K2 595 aaPredicted RBP12.24□□□□□ -0.45
LMO7-215ENST00000525107 ERBB3P21860 1342 aa12.22□□□□□ -0.45
LMO7-215ENST00000525107 PSEN1P49768 467 aa12.2□□□□□ -0.46
LMO7-215ENST00000525107 ZNF710Q8N1W2 664 aa12.19□□□□□ -0.46
LMO7-215ENST00000525107 MYT1LQ9UL68 1186 aa12.19□□□□□ -0.46
LMO7-215ENST00000525107 BOLA1Q9Y3E2 137 aa12.16□□□□□ -0.46
LMO7-215ENST00000525107 VARS2Q5ST30 1063 aaKnown RBP12.14□□□□□ -0.47
LMO7-215ENST00000525107 CHRM1P11229 460 aaPredicted RBP12.13□□□□□ -0.47
LMO7-215ENST00000525107 DOK7Q18PE1 504 aa12.13□□□□□ -0.47
LMO7-215ENST00000525107 GSE1Q14687 1217 aa12.12□□□□□ -0.47
LMO7-215ENST00000525107 G3V3G9 751 aa12.1□□□□□ -0.47
LMO7-215ENST00000525107 ZNF687Q8N1G0 1237 aa12.06□□□□□ -0.48
LMO7-215ENST00000525107 PDAP1Q13442 181 aaKnown RBP12.05□□□□□ -0.48
LMO7-215ENST00000525107 CABP2Q9NPB3 220 aa12.05□□□□□ -0.48
LMO7-215ENST00000525107 FBXO3Q9UK99 471 aa12.04□□□□□ -0.48
LMO7-215ENST00000525107 RIMBP2O15034 1052 aa12.03□□□□□ -0.48
LMO7-215ENST00000525107 PTGER2P43116 358 aa12□□□□□ -0.49
LMO7-215ENST00000525107 KLHL34Q8N239 644 aa11.98□□□□□ -0.49
LMO7-215ENST00000525107 VASPP50552 380 aaPredicted RBP11.97□□□□□ -0.49
LMO7-215ENST00000525107 ZSWIM6Q9HCJ5 1215 aa11.97□□□□□ -0.49
LMO7-215ENST00000525107 GPR153Q6NV75 609 aa11.96□□□□□ -0.49
LMO7-215ENST00000525107 ANKRD13DQ6ZTN6 518 aa11.94□□□□□ -0.5
LMO7-215ENST00000525107 TMEM92Q6UXU6 159 aa11.93□□□□□ -0.5
LMO7-215ENST00000525107 MICALL2Q8IY33 904 aa11.85□□□□□ -0.51
LMO7-215ENST00000525107 LSM11P83369 360 aaKnown RBP eCLIP11.84□□□□□ -0.51
LMO7-215ENST00000525107 ARSIQ5FYB1 569 aa11.84□□□□□ -0.51
LMO7-215ENST00000525107 IFNLR1Q8IU57 520 aaPredicted RBP11.84□□□□□ -0.51
LMO7-215ENST00000525107 EFCAB3Q8N7B9 438 aa11.83□□□□□ -0.52
LMO7-215ENST00000525107 PLA2G2EQ9NZK7 142 aa11.83□□□□□ -0.52
LMO7-215ENST00000525107 ZNF316A6NFI3 1004 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms