RNA–Protein interactions for RNA: ENST00000524649.1

ARHGAP42-202, Transcript of Rho GTPase activating protein 42, humanhuman

TSL 3

Gene ARHGAP42, Length 489 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP42-202ENST00000524649 POTEGQ6S5H5 508 aa13.15□□□□□ -0.3
ARHGAP42-202ENST00000524649 MAMSTRQ6ZN01 415 aa13.15□□□□□ -0.3
ARHGAP42-202ENST00000524649 METRNQ9UJH8 293 aa13.12□□□□□ -0.31
ARHGAP42-202ENST00000524649 PELP1Q8IZL8 1130 aaKnown RBP13.11□□□□□ -0.31
ARHGAP42-202ENST00000524649 ATMINO43313 823 aaPredicted RBP13.08□□□□□ -0.32
ARHGAP42-202ENST00000524649 MS4A3Q96HJ5 214 aa13.06□□□□□ -0.32
ARHGAP42-202ENST00000524649 SCUBE2Q9NQ36 999 aa13□□□□□ -0.33
ARHGAP42-202ENST00000524649 POTEJP0CG39 1038 aa12.95□□□□□ -0.34
ARHGAP42-202ENST00000524649 CCDC61Q9Y6R9 512 aa12.93□□□□□ -0.34
ARHGAP42-202ENST00000524649 ATN1P54259 1190 aaPredicted RBP12.89□□□□□ -0.35
ARHGAP42-202ENST00000524649 TSPYL2Q9H2G4 693 aaPredicted RBP12.89□□□□□ -0.35
ARHGAP42-202ENST00000524649 PROM2Q8N271 834 aa12.88□□□□□ -0.35
ARHGAP42-202ENST00000524649 KIF12Q96FN5 646 aa12.87□□□□□ -0.35
ARHGAP42-202ENST00000524649 TIE1P35590 1138 aa12.85□□□□□ -0.35
ARHGAP42-202ENST00000524649 PLEKHG5O94827 1062 aa12.84□□□□□ -0.35
ARHGAP42-202ENST00000524649 LCE2DQ5TA82 110 aaPredicted RBP12.84□□□□□ -0.35
ARHGAP42-202ENST00000524649 FAM163AQ96GL9 167 aaPredicted RBP12.83□□□□□ -0.36
ARHGAP42-202ENST00000524649 BMP2KQ9NSY1 1161 aaPredicted RBP12.82□□□□□ -0.36
ARHGAP42-202ENST00000524649 POTEFA5A3E0 1075 aa12.76□□□□□ -0.37
ARHGAP42-202ENST00000524649 IER5LQ5T953 404 aa12.74□□□□□ -0.37
ARHGAP42-202ENST00000524649 MAP3K13O43283 966 aa12.73□□□□□ -0.37
ARHGAP42-202ENST00000524649 SEC24BO95487 1268 aa12.73□□□□□ -0.37
ARHGAP42-202ENST00000524649 SGIP1Q9BQI5 828 aa12.73□□□□□ -0.37
ARHGAP42-202ENST00000524649 TTLL13PA6NNM8 815 aa12.69□□□□□ -0.38
ARHGAP42-202ENST00000524649 TRPC6Q9Y210 931 aa12.68□□□□□ -0.38
ARHGAP42-202ENST00000524649 RASEFQ8IZ41 740 aa12.66□□□□□ -0.38
ARHGAP42-202ENST00000524649 MIER1Q8N108 512 aa12.66□□□□□ -0.38
ARHGAP42-202ENST00000524649 COLQQ9Y215 455 aaPredicted RBP12.64□□□□□ -0.39
ARHGAP42-202ENST00000524649 CDAN1Q8IWY9 1227 aa12.63□□□□□ -0.39
ARHGAP42-202ENST00000524649 ZBTB47Q9UFB7 747 aaPredicted RBP12.62□□□□□ -0.39
ARHGAP42-202ENST00000524649 TRIM35Q9UPQ4 493 aa12.61□□□□□ -0.39
ARHGAP42-202ENST00000524649 PCDHB13Q9Y5F0 798 aa12.58□□□□□ -0.4
ARHGAP42-202ENST00000524649 FKBP8Q14318 412 aa12.57□□□□□ -0.4
ARHGAP42-202ENST00000524649 SLAIN1Q8ND83 568 aa12.53□□□□□ -0.4
ARHGAP42-202ENST00000524649 PLCD3Q8N3E9 789 aa12.52□□□□□ -0.41
ARHGAP42-202ENST00000524649 PLCG2P16885 1265 aa12.51□□□□□ -0.41
ARHGAP42-202ENST00000524649 ST18O60284 1047 aa12.5□□□□□ -0.41
ARHGAP42-202ENST00000524649 TMEM121BQ9BXQ6 578 aaPredicted RBP12.49□□□□□ -0.41
ARHGAP42-202ENST00000524649 FAM212AQ96EL1 285 aa12.47□□□□□ -0.41
ARHGAP42-202ENST00000524649 NUBP1P53384 320 aa12.46□□□□□ -0.41
ARHGAP42-202ENST00000524649 IFNL1Q8IU54 200 aa12.46□□□□□ -0.41
ARHGAP42-202ENST00000524649 TMEM106CQ9BVX2 250 aa12.46□□□□□ -0.41
ARHGAP42-202ENST00000524649 SNPHO15079 494 aa12.45□□□□□ -0.42
ARHGAP42-202ENST00000524649 IRX5P78411 483 aaPredicted RBP12.43□□□□□ -0.42
ARHGAP42-202ENST00000524649 OCEL1Q9H607 264 aa12.38□□□□□ -0.43
ARHGAP42-202ENST00000524649 MMRN1Q13201 1228 aa12.35□□□□□ -0.43
ARHGAP42-202ENST00000524649 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.35□□□□□ -0.43
ARHGAP42-202ENST00000524649 SPNS2Q8IVW8 549 aa12.33□□□□□ -0.44
ARHGAP42-202ENST00000524649 FBXO3Q9UK99 471 aa12.24□□□□□ -0.45
ARHGAP42-202ENST00000524649 DCAF8Q5TAQ9 597 aa12.2□□□□□ -0.46
ARHGAP42-202ENST00000524649 L3MBTL3Q96JM7 780 aaPredicted RBP12.2□□□□□ -0.46
ARHGAP42-202ENST00000524649 C3orf67Q6ZVT6 689 aa12.19□□□□□ -0.46
ARHGAP42-202ENST00000524649 MARVELD3Q96A59 401 aa12.18□□□□□ -0.46
ARHGAP42-202ENST00000524649 PYGBP11216 843 aa12.17□□□□□ -0.46
ARHGAP42-202ENST00000524649 EMP3P54852 163 aa12.15□□□□□ -0.46
ARHGAP42-202ENST00000524649 ZNF467Q7Z7K2 595 aaPredicted RBP12.15□□□□□ -0.46
ARHGAP42-202ENST00000524649 PDCD7Q8N8D1 485 aaKnown RBP12.15□□□□□ -0.46
ARHGAP42-202ENST00000524649 GOLGA2Q08379 1002 aa12.13□□□□□ -0.47
ARHGAP42-202ENST00000524649 MKRN3Q13064 507 aaKnown RBP12.13□□□□□ -0.47
ARHGAP42-202ENST00000524649 PCDHB8Q9UN66 801 aa12.13□□□□□ -0.47
ARHGAP42-202ENST00000524649 GSE1Q14687 1217 aa12.1□□□□□ -0.47
ARHGAP42-202ENST00000524649 VASPP50552 380 aaPredicted RBP12.09□□□□□ -0.47
ARHGAP42-202ENST00000524649 HS3ST6Q96QI5 342 aa12.06□□□□□ -0.48
ARHGAP42-202ENST00000524649 CHRM1P11229 460 aaPredicted RBP12.05□□□□□ -0.48
ARHGAP42-202ENST00000524649 KRTAP3-3Q9BYR6 98 aa12.04□□□□□ -0.48
ARHGAP42-202ENST00000524649 KRTAP3-2Q9BYR7 98 aa12.04□□□□□ -0.48
ARHGAP42-202ENST00000524649 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.04□□□□□ -0.48
ARHGAP42-202ENST00000524649 FAM205CA6NFA0 338 aa12.01□□□□□ -0.49
ARHGAP42-202ENST00000524649 ILDR1Q86SU0 546 aaPredicted RBP12.01□□□□□ -0.49
ARHGAP42-202ENST00000524649 PSEN1P49768 467 aa11.97□□□□□ -0.49
ARHGAP42-202ENST00000524649 POTEB3A0JP26 581 aa11.95□□□□□ -0.5
ARHGAP42-202ENST00000524649 POTEBQ6S5H4 581 aa11.95□□□□□ -0.5
ARHGAP42-202ENST00000524649 G3V3G9 751 aa11.94□□□□□ -0.5
ARHGAP42-202ENST00000524649 PDAP1Q13442 181 aaKnown RBP11.93□□□□□ -0.5
ARHGAP42-202ENST00000524649 IFNLR1Q8IU57 520 aaPredicted RBP11.91□□□□□ -0.5
ARHGAP42-202ENST00000524649 KLHL34Q8N239 644 aa11.91□□□□□ -0.5
ARHGAP42-202ENST00000524649 HOXB1P14653 301 aaPredicted RBP11.9□□□□□ -0.5
ARHGAP42-202ENST00000524649 BOLA1Q9Y3E2 137 aa11.89□□□□□ -0.51
ARHGAP42-202ENST00000524649 DOK7Q18PE1 504 aa11.88□□□□□ -0.51
ARHGAP42-202ENST00000524649 ZNF710Q8N1W2 664 aa11.88□□□□□ -0.51
ARHGAP42-202ENST00000524649 HOXB3P14651 431 aaPredicted RBP11.87□□□□□ -0.51
ARHGAP42-202ENST00000524649 RIMBP2O15034 1052 aa11.84□□□□□ -0.51
ARHGAP42-202ENST00000524649 ERBB3P21860 1342 aa11.82□□□□□ -0.52
ARHGAP42-202ENST00000524649 RNF166Q96A37 237 aaPredicted RBP11.81□□□□□ -0.52
ARHGAP42-202ENST00000524649 DPY19L2Q6NUT2 758 aa11.8□□□□□ -0.52
ARHGAP42-202ENST00000524649 CABP2Q9NPB3 220 aa11.8□□□□□ -0.52
ARHGAP42-202ENST00000524649 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
ARHGAP42-202ENST00000524649 ZSWIM6Q9HCJ5 1215 aa11.78□□□□□ -0.52
ARHGAP42-202ENST00000524649 PTGER2P43116 358 aa11.77□□□□□ -0.53
ARHGAP42-202ENST00000524649 MYT1LQ9UL68 1186 aa11.74□□□□□ -0.53
ARHGAP42-202ENST00000524649 VARS2Q5ST30 1063 aaKnown RBP11.71□□□□□ -0.53
ARHGAP42-202ENST00000524649 ZNF687Q8N1G0 1237 aa11.69□□□□□ -0.54
ARHGAP42-202ENST00000524649 TRIM41Q8WV44 630 aa11.66□□□□□ -0.54
ARHGAP42-202ENST00000524649 CIZ1Q9ULV3 898 aaPredicted RBP11.64□□□□□ -0.55
ARHGAP42-202ENST00000524649 GPR153Q6NV75 609 aa11.6□□□□□ -0.55
ARHGAP42-202ENST00000524649 MICALL2Q8IY33 904 aa11.6□□□□□ -0.55
ARHGAP42-202ENST00000524649 EFCAB3Q8N7B9 438 aa11.59□□□□□ -0.55
ARHGAP42-202ENST00000524649 SOX12O15370 315 aa11.57□□□□□ -0.56
ARHGAP42-202ENST00000524649 TMEM92Q6UXU6 159 aa11.53□□□□□ -0.56
ARHGAP42-202ENST00000524649 ZNF316A6NFI3 1004 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms