RNA–Protein interactions for RNA: ENST00000524291.1

VDAC3-212, Transcript of voltage dependent anion channel 3, humanhuman

TSL 2

Gene VDAC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-212ENST00000524291 METRNQ9UJH8 293 aa14.36□□□□□ -0.11
VDAC3-212ENST00000524291 PLEKHG5O94827 1062 aa14.35□□□□□ -0.11
VDAC3-212ENST00000524291 SLC39A7Q92504 469 aa14.35□□□□□ -0.11
VDAC3-212ENST00000524291 PLSCR2Q9NRY7 297 aa14.34□□□□□ -0.11
VDAC3-212ENST00000524291 C7P10643 843 aa14.33□□□□□ -0.12
VDAC3-212ENST00000524291 CCDC61Q9Y6R9 512 aa14.33□□□□□ -0.12
VDAC3-212ENST00000524291 MIER1Q8N108 512 aa14.3□□□□□ -0.12
VDAC3-212ENST00000524291 KIF12Q96FN5 646 aa14.27□□□□□ -0.13
VDAC3-212ENST00000524291 ATN1P54259 1190 aaPredicted RBP14.23□□□□□ -0.13
VDAC3-212ENST00000524291 MAMSTRQ6ZN01 415 aa14.22□□□□□ -0.13
VDAC3-212ENST00000524291 POTEMA6NI47 508 aa14.19□□□□□ -0.14
VDAC3-212ENST00000524291 RASEFQ8IZ41 740 aa14.19□□□□□ -0.14
VDAC3-212ENST00000524291 MAP3K13O43283 966 aa14.18□□□□□ -0.14
VDAC3-212ENST00000524291 POTEJP0CG39 1038 aa14.18□□□□□ -0.14
VDAC3-212ENST00000524291 PLCD3Q8N3E9 789 aa14.18□□□□□ -0.14
VDAC3-212ENST00000524291 BMP2KQ9NSY1 1161 aaPredicted RBP14.17□□□□□ -0.14
VDAC3-212ENST00000524291 POTEGQ6S5H5 508 aa14.15□□□□□ -0.14
VDAC3-212ENST00000524291 TRPC6Q9Y210 931 aa14.14□□□□□ -0.15
VDAC3-212ENST00000524291 TIE1P35590 1138 aa14.13□□□□□ -0.15
VDAC3-212ENST00000524291 SCUBE2Q9NQ36 999 aa14.13□□□□□ -0.15
VDAC3-212ENST00000524291 ZBTB47Q9UFB7 747 aaPredicted RBP14.08□□□□□ -0.16
VDAC3-212ENST00000524291 POTEFA5A3E0 1075 aa14.05□□□□□ -0.16
VDAC3-212ENST00000524291 TTLL13PA6NNM8 815 aa14.04□□□□□ -0.16
VDAC3-212ENST00000524291 SEC24BO95487 1268 aa14.03□□□□□ -0.16
VDAC3-212ENST00000524291 PCDHB13Q9Y5F0 798 aa14.03□□□□□ -0.16
VDAC3-212ENST00000524291 FAM163AQ96GL9 167 aaPredicted RBP14.01□□□□□ -0.17
VDAC3-212ENST00000524291 SGIP1Q9BQI5 828 aa14.01□□□□□ -0.17
VDAC3-212ENST00000524291 NUBP1P53384 320 aa13.99□□□□□ -0.17
VDAC3-212ENST00000524291 PCDH10Q9P2E7 1040 aa13.99□□□□□ -0.17
VDAC3-212ENST00000524291 TRIM35Q9UPQ4 493 aa13.97□□□□□ -0.17
VDAC3-212ENST00000524291 COLQQ9Y215 455 aaPredicted RBP13.97□□□□□ -0.17
VDAC3-212ENST00000524291 FAM212AQ96EL1 285 aa13.96□□□□□ -0.17
VDAC3-212ENST00000524291 FKBP8Q14318 412 aa13.95□□□□□ -0.18
VDAC3-212ENST00000524291 IER5LQ5T953 404 aa13.94□□□□□ -0.18
VDAC3-212ENST00000524291 LCE2DQ5TA82 110 aaPredicted RBP13.92□□□□□ -0.18
VDAC3-212ENST00000524291 IFNL1Q8IU54 200 aa13.91□□□□□ -0.18
VDAC3-212ENST00000524291 TMEM106CQ9BVX2 250 aa13.87□□□□□ -0.19
VDAC3-212ENST00000524291 PLCG2P16885 1265 aa13.81□□□□□ -0.2
VDAC3-212ENST00000524291 DCAF8Q5TAQ9 597 aa13.81□□□□□ -0.2
VDAC3-212ENST00000524291 SLAIN1Q8ND83 568 aa13.77□□□□□ -0.21
VDAC3-212ENST00000524291 PYGBP11216 843 aa13.76□□□□□ -0.21
VDAC3-212ENST00000524291 FBXO3Q9UK99 471 aa13.76□□□□□ -0.21
VDAC3-212ENST00000524291 IRX5P78411 483 aaPredicted RBP13.71□□□□□ -0.21
VDAC3-212ENST00000524291 OCEL1Q9H607 264 aa13.68□□□□□ -0.22
VDAC3-212ENST00000524291 PCDHB8Q9UN66 801 aa13.68□□□□□ -0.22
VDAC3-212ENST00000524291 CDAN1Q8IWY9 1227 aa13.66□□□□□ -0.22
VDAC3-212ENST00000524291 ST18O60284 1047 aa13.65□□□□□ -0.22
VDAC3-212ENST00000524291 KLHL34Q8N239 644 aa13.64□□□□□ -0.23
VDAC3-212ENST00000524291 GSE1Q14687 1217 aa13.6□□□□□ -0.23
VDAC3-212ENST00000524291 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.59□□□□□ -0.23
VDAC3-212ENST00000524291 VASPP50552 380 aaPredicted RBP13.57□□□□□ -0.24
VDAC3-212ENST00000524291 ZNF467Q7Z7K2 595 aaPredicted RBP13.57□□□□□ -0.24
VDAC3-212ENST00000524291 GOLGA2Q08379 1002 aa13.56□□□□□ -0.24
VDAC3-212ENST00000524291 SNPHO15079 494 aa13.54□□□□□ -0.24
VDAC3-212ENST00000524291 MKRN3Q13064 507 aaKnown RBP13.52□□□□□ -0.25
VDAC3-212ENST00000524291 TMEM121BQ9BXQ6 578 aaPredicted RBP13.5□□□□□ -0.25
VDAC3-212ENST00000524291 CHRM1P11229 460 aaPredicted RBP13.47□□□□□ -0.25
VDAC3-212ENST00000524291 C3orf67Q6ZVT6 689 aa13.47□□□□□ -0.25
VDAC3-212ENST00000524291 PDCD7Q8N8D1 485 aaKnown RBP13.47□□□□□ -0.25
VDAC3-212ENST00000524291 L3MBTL3Q96JM7 780 aaPredicted RBP13.45□□□□□ -0.26
VDAC3-212ENST00000524291 PSEN1P49768 467 aa13.44□□□□□ -0.26
VDAC3-212ENST00000524291 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.43□□□□□ -0.26
VDAC3-212ENST00000524291 MARVELD3Q96A59 401 aa13.41□□□□□ -0.26
VDAC3-212ENST00000524291 PDAP1Q13442 181 aaKnown RBP13.37□□□□□ -0.27
VDAC3-212ENST00000524291 CIZ1Q9ULV3 898 aaPredicted RBP13.35□□□□□ -0.27
VDAC3-212ENST00000524291 SPOCK2Q92563 424 aa13.34□□□□□ -0.27
VDAC3-212ENST00000524291 SPNS2Q8IVW8 549 aa13.32□□□□□ -0.28
VDAC3-212ENST00000524291 EMP3P54852 163 aa13.31□□□□□ -0.28
VDAC3-212ENST00000524291 MMRN1Q13201 1228 aa13.31□□□□□ -0.28
VDAC3-212ENST00000524291 CABP2Q9NPB3 220 aa13.3□□□□□ -0.28
VDAC3-212ENST00000524291 G3V3G9 751 aa13.29□□□□□ -0.28
VDAC3-212ENST00000524291 IFNLR1Q8IU57 520 aaPredicted RBP13.28□□□□□ -0.28
VDAC3-212ENST00000524291 ILDR1Q86SU0 546 aaPredicted RBP13.27□□□□□ -0.29
VDAC3-212ENST00000524291 DPY19L2Q6NUT2 758 aa13.26□□□□□ -0.29
VDAC3-212ENST00000524291 BOLA1Q9Y3E2 137 aa13.22□□□□□ -0.29
VDAC3-212ENST00000524291 FAM205CA6NFA0 338 aa13.21□□□□□ -0.29
VDAC3-212ENST00000524291 HS3ST6Q96QI5 342 aa13.21□□□□□ -0.29
VDAC3-212ENST00000524291 POTEB3A0JP26 581 aa13.15□□□□□ -0.3
VDAC3-212ENST00000524291 POTEBQ6S5H4 581 aa13.15□□□□□ -0.3
VDAC3-212ENST00000524291 ZNF710Q8N1W2 664 aa13.12□□□□□ -0.31
VDAC3-212ENST00000524291 TRIM41Q8WV44 630 aa13.12□□□□□ -0.31
VDAC3-212ENST00000524291 KRTAP3-3Q9BYR6 98 aa13.12□□□□□ -0.31
VDAC3-212ENST00000524291 KRTAP3-2Q9BYR7 98 aa13.12□□□□□ -0.31
VDAC3-212ENST00000524291 HOXB3P14651 431 aaPredicted RBP13.11□□□□□ -0.31
VDAC3-212ENST00000524291 EFCAB3Q8N7B9 438 aa13.09□□□□□ -0.31
VDAC3-212ENST00000524291 DOK7Q18PE1 504 aa13.08□□□□□ -0.32
VDAC3-212ENST00000524291 HOXB1P14653 301 aaPredicted RBP13.05□□□□□ -0.32
VDAC3-212ENST00000524291 ERBB3P21860 1342 aa13.03□□□□□ -0.32
VDAC3-212ENST00000524291 RIMBP2O15034 1052 aa13.02□□□□□ -0.33
VDAC3-212ENST00000524291 MICALL2Q8IY33 904 aa12.97□□□□□ -0.33
VDAC3-212ENST00000524291 RIOK3O14730 519 aaKnown RBP12.96□□□□□ -0.33
VDAC3-212ENST00000524291 SOX12O15370 315 aa12.95□□□□□ -0.34
VDAC3-212ENST00000524291 VARS2Q5ST30 1063 aaKnown RBP12.92□□□□□ -0.34
VDAC3-212ENST00000524291 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.91□□□□□ -0.34
VDAC3-212ENST00000524291 TMEM92Q6UXU6 159 aa12.91□□□□□ -0.34
VDAC3-212ENST00000524291 ZFP91Q96JP5 570 aaPredicted RBP12.91□□□□□ -0.34
VDAC3-212ENST00000524291 VGFO15240 615 aaPredicted RBP12.9□□□□□ -0.34
VDAC3-212ENST00000524291 ZSWIM6Q9HCJ5 1215 aa12.9□□□□□ -0.34
VDAC3-212ENST00000524291 RNF25Q96BH1 459 aaPredicted RBP12.89□□□□□ -0.35
VDAC3-212ENST00000524291 PHF8Q9UPP1 1060 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms