RNA–Protein interactions for RNA: ENST00000524204.1

NPM1-212, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-212ENST00000524204 ATMINO43313 823 aaPredicted RBP16.32■□□□□ 0.2
NPM1-212ENST00000524204 METRNQ9UJH8 293 aa16.32■□□□□ 0.2
NPM1-212ENST00000524204 SLC39A7Q92504 469 aa16.24■□□□□ 0.19
NPM1-212ENST00000524204 C7P10643 843 aa16.23■□□□□ 0.19
NPM1-212ENST00000524204 EHMT2Q96KQ7 1210 aa16.21■□□□□ 0.19
NPM1-212ENST00000524204 TSPYL2Q9H2G4 693 aaPredicted RBP16.2■□□□□ 0.18
NPM1-212ENST00000524204 LCE2DQ5TA82 110 aaPredicted RBP16.17■□□□□ 0.18
NPM1-212ENST00000524204 ATN1P54259 1190 aaPredicted RBP16.16■□□□□ 0.18
NPM1-212ENST00000524204 CCDC61Q9Y6R9 512 aa16.15■□□□□ 0.18
NPM1-212ENST00000524204 POTEFA5A3E0 1075 aa16.1■□□□□ 0.17
NPM1-212ENST00000524204 TRPC6Q9Y210 931 aa16.1■□□□□ 0.17
NPM1-212ENST00000524204 KIF12Q96FN5 646 aa16.09■□□□□ 0.17
NPM1-212ENST00000524204 MAMSTRQ6ZN01 415 aa16.08■□□□□ 0.16
NPM1-212ENST00000524204 PROM2Q8N271 834 aa16.08■□□□□ 0.16
NPM1-212ENST00000524204 FAM163AQ96GL9 167 aaPredicted RBP16.06■□□□□ 0.16
NPM1-212ENST00000524204 PCDH10Q9P2E7 1040 aa16.06■□□□□ 0.16
NPM1-212ENST00000524204 BMP2KQ9NSY1 1161 aaPredicted RBP16.04■□□□□ 0.16
NPM1-212ENST00000524204 SCUBE2Q9NQ36 999 aa15.99■□□□□ 0.15
NPM1-212ENST00000524204 MAP3K13O43283 966 aa15.97■□□□□ 0.15
NPM1-212ENST00000524204 RASEFQ8IZ41 740 aa15.93■□□□□ 0.14
NPM1-212ENST00000524204 COLQQ9Y215 455 aaPredicted RBP15.91■□□□□ 0.14
NPM1-212ENST00000524204 TIE1P35590 1138 aa15.89■□□□□ 0.13
NPM1-212ENST00000524204 TTLL13PA6NNM8 815 aa15.85■□□□□ 0.13
NPM1-212ENST00000524204 MIER1Q8N108 512 aa15.84■□□□□ 0.13
NPM1-212ENST00000524204 SEC24BO95487 1268 aa15.78■□□□□ 0.12
NPM1-212ENST00000524204 TRIM35Q9UPQ4 493 aa15.74■□□□□ 0.11
NPM1-212ENST00000524204 PLEKHG5O94827 1062 aa15.72■□□□□ 0.11
NPM1-212ENST00000524204 CDAN1Q8IWY9 1227 aa15.7■□□□□ 0.1
NPM1-212ENST00000524204 PCDHB13Q9Y5F0 798 aa15.69■□□□□ 0.1
NPM1-212ENST00000524204 IER5LQ5T953 404 aa15.67■□□□□ 0.1
NPM1-212ENST00000524204 SGIP1Q9BQI5 828 aa15.66■□□□□ 0.1
NPM1-212ENST00000524204 NUBP1P53384 320 aa15.64■□□□□ 0.09
NPM1-212ENST00000524204 IFNL1Q8IU54 200 aa15.63■□□□□ 0.09
NPM1-212ENST00000524204 PLCD3Q8N3E9 789 aa15.62■□□□□ 0.09
NPM1-212ENST00000524204 ST18O60284 1047 aa15.61■□□□□ 0.09
NPM1-212ENST00000524204 SLAIN1Q8ND83 568 aa15.61■□□□□ 0.09
NPM1-212ENST00000524204 TMEM106CQ9BVX2 250 aa15.56■□□□□ 0.08
NPM1-212ENST00000524204 IRX5P78411 483 aaPredicted RBP15.51■□□□□ 0.07
NPM1-212ENST00000524204 PLCG2P16885 1265 aa15.49■□□□□ 0.07
NPM1-212ENST00000524204 ZBTB47Q9UFB7 747 aaPredicted RBP15.44■□□□□ 0.06
NPM1-212ENST00000524204 FAM212AQ96EL1 285 aa15.43■□□□□ 0.06
NPM1-212ENST00000524204 OCEL1Q9H607 264 aa15.37■□□□□ 0.05
NPM1-212ENST00000524204 MMRN1Q13201 1228 aa15.36■□□□□ 0.05
NPM1-212ENST00000524204 SPNS2Q8IVW8 549 aa15.35■□□□□ 0.05
NPM1-212ENST00000524204 PYGBP11216 843 aa15.34■□□□□ 0.05
NPM1-212ENST00000524204 MARVELD3Q96A59 401 aa15.31■□□□□ 0.04
NPM1-212ENST00000524204 PCDHB8Q9UN66 801 aa15.31■□□□□ 0.04
NPM1-212ENST00000524204 TMEM121BQ9BXQ6 578 aaPredicted RBP15.3■□□□□ 0.04
NPM1-212ENST00000524204 DCAF8Q5TAQ9 597 aa15.29■□□□□ 0.04
NPM1-212ENST00000524204 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.27■□□□□ 0.04
NPM1-212ENST00000524204 SNPHO15079 494 aa15.22■□□□□ 0.03
NPM1-212ENST00000524204 PDCD7Q8N8D1 485 aaKnown RBP15.2■□□□□ 0.02
NPM1-212ENST00000524204 FKBP8Q14318 412 aa15.17■□□□□ 0.02
NPM1-212ENST00000524204 POTEB3A0JP26 581 aa15.15■□□□□ 0.02
NPM1-212ENST00000524204 POTEBQ6S5H4 581 aa15.15■□□□□ 0.02
NPM1-212ENST00000524204 EMP3P54852 163 aa15.08■□□□□ 0
NPM1-212ENST00000524204 KRTAP3-3Q9BYR6 98 aa15.08■□□□□ 0
NPM1-212ENST00000524204 KRTAP3-2Q9BYR7 98 aa15.08■□□□□ 0
NPM1-212ENST00000524204 C3orf67Q6ZVT6 689 aa15.06■□□□□ 0
NPM1-212ENST00000524204 MKRN3Q13064 507 aaKnown RBP15.03■□□□□ -0
NPM1-212ENST00000524204 L3MBTL3Q96JM7 780 aaPredicted RBP15.03■□□□□ -0
NPM1-212ENST00000524204 HS3ST6Q96QI5 342 aa15.03■□□□□ -0
NPM1-212ENST00000524204 FAM205CA6NFA0 338 aa15.02■□□□□ -0
NPM1-212ENST00000524204 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.01□□□□□ -0.016e-22■■□□□ 12.4
NPM1-212ENST00000524204 ZNF467Q7Z7K2 595 aaPredicted RBP15□□□□□ -0.01
NPM1-212ENST00000524204 GOLGA2Q08379 1002 aa14.98□□□□□ -0.01
NPM1-212ENST00000524204 DPY19L2Q6NUT2 758 aa14.97□□□□□ -0.01
NPM1-212ENST00000524204 PSEN1P49768 467 aa14.96□□□□□ -0.01
NPM1-212ENST00000524204 GSE1Q14687 1217 aa14.95□□□□□ -0.02
NPM1-212ENST00000524204 ILDR1Q86SU0 546 aaPredicted RBP14.94□□□□□ -0.02
NPM1-212ENST00000524204 CHRM1P11229 460 aaPredicted RBP14.93□□□□□ -0.02
NPM1-212ENST00000524204 KLHL34Q8N239 644 aa14.91□□□□□ -0.02
NPM1-212ENST00000524204 FBXO3Q9UK99 471 aa14.91□□□□□ -0.02
NPM1-212ENST00000524204 HOXB3P14651 431 aaPredicted RBP14.88□□□□□ -0.03
NPM1-212ENST00000524204 VASPP50552 380 aaPredicted RBP14.85□□□□□ -0.03
NPM1-212ENST00000524204 BOLA1Q9Y3E2 137 aa14.8□□□□□ -0.04
NPM1-212ENST00000524204 PDAP1Q13442 181 aaKnown RBP14.79□□□□□ -0.04
NPM1-212ENST00000524204 CABP2Q9NPB3 220 aa14.79□□□□□ -0.04
NPM1-212ENST00000524204 HOXB1P14653 301 aaPredicted RBP14.75□□□□□ -0.05
NPM1-212ENST00000524204 ZNF710Q8N1W2 664 aa14.69□□□□□ -0.06
NPM1-212ENST00000524204 ERBB3P21860 1342 aa14.68□□□□□ -0.06
NPM1-212ENST00000524204 G3V3G9 751 aa14.68□□□□□ -0.06
NPM1-212ENST00000524204 DOK7Q18PE1 504 aa14.64□□□□□ -0.07
NPM1-212ENST00000524204 CIZ1Q9ULV3 898 aaPredicted RBP14.63□□□□□ -0.07
NPM1-212ENST00000524204 VARS2Q5ST30 1063 aaKnown RBP14.61□□□□□ -0.07
NPM1-212ENST00000524204 IFNLR1Q8IU57 520 aaPredicted RBP14.61□□□□□ -0.07
NPM1-212ENST00000524204 RNF166Q96A37 237 aaPredicted RBP14.61□□□□□ -0.07
NPM1-212ENST00000524204 TMEM92Q6UXU6 159 aa14.59□□□□□ -0.07
NPM1-212ENST00000524204 EFCAB3Q8N7B9 438 aa14.58□□□□□ -0.08
NPM1-212ENST00000524204 SPOCK2Q92563 424 aa14.58□□□□□ -0.08
NPM1-212ENST00000524204 MYT1LQ9UL68 1186 aa14.52□□□□□ -0.09
NPM1-212ENST00000524204 RIMBP2O15034 1052 aa14.51□□□□□ -0.09
NPM1-212ENST00000524204 MICALL2Q8IY33 904 aa14.5□□□□□ -0.09
NPM1-212ENST00000524204 ZNF687Q8N1G0 1237 aa14.5□□□□□ -0.09
NPM1-212ENST00000524204 GPR153Q6NV75 609 aa14.49□□□□□ -0.09
NPM1-212ENST00000524204 ZSWIM6Q9HCJ5 1215 aa14.44□□□□□ -0.1
NPM1-212ENST00000524204 MS4A4AQ96JQ5 239 aa14.42□□□□□ -0.1
NPM1-212ENST00000524204 ARSIQ5FYB1 569 aa14.38□□□□□ -0.11
NPM1-212ENST00000524204 KHSRPQ92945 711 aaKnown RBP eCLIP14.35□□□□□ -0.117e-10■■■□□ 17.6
NPM1-212ENST00000524204 ANKRD13DQ6ZTN6 518 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms