RNA–Protein interactions for RNA: ENST00000524177.5

CSMD1-214, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-214ENST00000524177 METRNQ9UJH8 293 aa9.49□□□□□ -0.89
CSMD1-214ENST00000524177 PLSCR2Q9NRY7 297 aa9.47□□□□□ -0.89
CSMD1-214ENST00000524177 CCDC61Q9Y6R9 512 aa9.47□□□□□ -0.89
CSMD1-214ENST00000524177 SLC39A7Q92504 469 aa9.45□□□□□ -0.9
CSMD1-214ENST00000524177 C7P10643 843 aa9.43□□□□□ -0.9
CSMD1-214ENST00000524177 MIER1Q8N108 512 aa9.43□□□□□ -0.9
CSMD1-214ENST00000524177 KIF12Q96FN5 646 aa9.43□□□□□ -0.9
CSMD1-214ENST00000524177 POTEJP0CG39 1038 aa9.42□□□□□ -0.9
CSMD1-214ENST00000524177 PLEKHG5O94827 1062 aa9.41□□□□□ -0.9
CSMD1-214ENST00000524177 ATN1P54259 1190 aaPredicted RBP9.41□□□□□ -0.9
CSMD1-214ENST00000524177 TRPC6Q9Y210 931 aa9.4□□□□□ -0.9
CSMD1-214ENST00000524177 RASEFQ8IZ41 740 aa9.39□□□□□ -0.91
CSMD1-214ENST00000524177 POTEMA6NI47 508 aa9.38□□□□□ -0.91
CSMD1-214ENST00000524177 MAP3K13O43283 966 aa9.37□□□□□ -0.91
CSMD1-214ENST00000524177 BMP2KQ9NSY1 1161 aaPredicted RBP9.37□□□□□ -0.91
CSMD1-214ENST00000524177 POTEGQ6S5H5 508 aa9.36□□□□□ -0.91
CSMD1-214ENST00000524177 PLCD3Q8N3E9 789 aa9.34□□□□□ -0.91
CSMD1-214ENST00000524177 MAMSTRQ6ZN01 415 aa9.33□□□□□ -0.92
CSMD1-214ENST00000524177 POTEFA5A3E0 1075 aa9.32□□□□□ -0.92
CSMD1-214ENST00000524177 TIE1P35590 1138 aa9.32□□□□□ -0.92
CSMD1-214ENST00000524177 SCUBE2Q9NQ36 999 aa9.31□□□□□ -0.92
CSMD1-214ENST00000524177 TTLL13PA6NNM8 815 aa9.28□□□□□ -0.92
CSMD1-214ENST00000524177 PCDHB13Q9Y5F0 798 aa9.26□□□□□ -0.93
CSMD1-214ENST00000524177 NUBP1P53384 320 aa9.25□□□□□ -0.93
CSMD1-214ENST00000524177 LCE2DQ5TA82 110 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-214ENST00000524177 FAM163AQ96GL9 167 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-214ENST00000524177 COLQQ9Y215 455 aaPredicted RBP9.25□□□□□ -0.93
CSMD1-214ENST00000524177 SEC24BO95487 1268 aa9.24□□□□□ -0.93
CSMD1-214ENST00000524177 ZBTB47Q9UFB7 747 aaPredicted RBP9.24□□□□□ -0.93
CSMD1-214ENST00000524177 TRIM35Q9UPQ4 493 aa9.23□□□□□ -0.93
CSMD1-214ENST00000524177 FKBP8Q14318 412 aa9.22□□□□□ -0.93
CSMD1-214ENST00000524177 SGIP1Q9BQI5 828 aa9.22□□□□□ -0.93
CSMD1-214ENST00000524177 IFNL1Q8IU54 200 aa9.2□□□□□ -0.94
CSMD1-214ENST00000524177 FAM212AQ96EL1 285 aa9.19□□□□□ -0.94
CSMD1-214ENST00000524177 PCDH10Q9P2E7 1040 aa9.18□□□□□ -0.94
CSMD1-214ENST00000524177 IER5LQ5T953 404 aa9.17□□□□□ -0.94
CSMD1-214ENST00000524177 TMEM106CQ9BVX2 250 aa9.16□□□□□ -0.94
CSMD1-214ENST00000524177 PYGBP11216 843 aa9.1□□□□□ -0.95
CSMD1-214ENST00000524177 PLCG2P16885 1265 aa9.1□□□□□ -0.95
CSMD1-214ENST00000524177 DCAF8Q5TAQ9 597 aa9.1□□□□□ -0.95
CSMD1-214ENST00000524177 SLAIN1Q8ND83 568 aa9.09□□□□□ -0.95
CSMD1-214ENST00000524177 IRX5P78411 483 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-214ENST00000524177 PCDHB8Q9UN66 801 aa9.05□□□□□ -0.96
CSMD1-214ENST00000524177 FBXO3Q9UK99 471 aa9.03□□□□□ -0.96
CSMD1-214ENST00000524177 ST18O60284 1047 aa9.02□□□□□ -0.97
CSMD1-214ENST00000524177 CDAN1Q8IWY9 1227 aa9.02□□□□□ -0.97
CSMD1-214ENST00000524177 OCEL1Q9H607 264 aa9.02□□□□□ -0.97
CSMD1-214ENST00000524177 RTN4Q9NQC3 1192 aaKnown RBP8.99□□□□□ -0.97
CSMD1-214ENST00000524177 KLHL34Q8N239 644 aa8.98□□□□□ -0.97
CSMD1-214ENST00000524177 VASPP50552 380 aaPredicted RBP8.96□□□□□ -0.98
CSMD1-214ENST00000524177 AMER1Q5JTC6 1135 aaPredicted RBP8.95□□□□□ -0.98
CSMD1-214ENST00000524177 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.95□□□□□ -0.98
CSMD1-214ENST00000524177 GSE1Q14687 1217 aa8.94□□□□□ -0.98
CSMD1-214ENST00000524177 ZNF467Q7Z7K2 595 aaPredicted RBP8.92□□□□□ -0.98
CSMD1-214ENST00000524177 GOLGA2Q08379 1002 aa8.91□□□□□ -0.98
CSMD1-214ENST00000524177 PDCD7Q8N8D1 485 aaKnown RBP8.91□□□□□ -0.98
CSMD1-214ENST00000524177 MKRN3Q13064 507 aaKnown RBP8.9□□□□□ -0.98
CSMD1-214ENST00000524177 SNPHO15079 494 aa8.89□□□□□ -0.99
CSMD1-214ENST00000524177 MARVELD3Q96A59 401 aa8.88□□□□□ -0.99
CSMD1-214ENST00000524177 TMEM121BQ9BXQ6 578 aaPredicted RBP8.88□□□□□ -0.99
CSMD1-214ENST00000524177 PSEN1P49768 467 aa8.87□□□□□ -0.99
CSMD1-214ENST00000524177 C3orf67Q6ZVT6 689 aa8.87□□□□□ -0.99
CSMD1-214ENST00000524177 CHRM1P11229 460 aaPredicted RBP8.86□□□□□ -0.99
CSMD1-214ENST00000524177 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.86□□□□□ -0.99
CSMD1-214ENST00000524177 L3MBTL3Q96JM7 780 aaPredicted RBP8.84□□□□□ -0.99
CSMD1-214ENST00000524177 MMRN1Q13201 1228 aa8.8□□□□□ -1
CSMD1-214ENST00000524177 PDAP1Q13442 181 aaKnown RBP8.8□□□□□ -1
CSMD1-214ENST00000524177 SPNS2Q8IVW8 549 aa8.8□□□□□ -1
CSMD1-214ENST00000524177 CIZ1Q9ULV3 898 aaPredicted RBP8.8□□□□□ -1
CSMD1-214ENST00000524177 EMP3P54852 163 aa8.79□□□□□ -1
CSMD1-214ENST00000524177 DPY19L2Q6NUT2 758 aa8.79□□□□□ -1
CSMD1-214ENST00000524177 IFNLR1Q8IU57 520 aaPredicted RBP8.79□□□□□ -1
CSMD1-214ENST00000524177 SPOCK2Q92563 424 aa8.78□□□□□ -1
CSMD1-214ENST00000524177 CABP2Q9NPB3 220 aa8.78□□□□□ -1
CSMD1-214ENST00000524177 ILDR1Q86SU0 546 aaPredicted RBP8.77□□□□□ -1.01
CSMD1-214ENST00000524177 SLC24A1O60721 1099 aa8.76□□□□□ -1.01
CSMD1-214ENST00000524177 POTEB3A0JP26 581 aa8.74□□□□□ -1.01
CSMD1-214ENST00000524177 FAM205CA6NFA0 338 aa8.74□□□□□ -1.01
CSMD1-214ENST00000524177 POTEBQ6S5H4 581 aa8.74□□□□□ -1.01
CSMD1-214ENST00000524177 HS3ST6Q96QI5 342 aa8.73□□□□□ -1.01
CSMD1-214ENST00000524177 BOLA1Q9Y3E2 137 aa8.73□□□□□ -1.01
CSMD1-214ENST00000524177 G3V3G9 751 aa8.72□□□□□ -1.01
CSMD1-214ENST00000524177 KRTAP3-3Q9BYR6 98 aa8.7□□□□□ -1.02
CSMD1-214ENST00000524177 KRTAP3-2Q9BYR7 98 aa8.7□□□□□ -1.02
CSMD1-214ENST00000524177 HOXB3P14651 431 aaPredicted RBP8.67□□□□□ -1.02
CSMD1-214ENST00000524177 EFCAB3Q8N7B9 438 aa8.66□□□□□ -1.02
CSMD1-214ENST00000524177 ZNF710Q8N1W2 664 aa8.64□□□□□ -1.03
CSMD1-214ENST00000524177 HOXB1P14653 301 aaPredicted RBP8.62□□□□□ -1.03
CSMD1-214ENST00000524177 TRIM41Q8WV44 630 aa8.61□□□□□ -1.03
CSMD1-214ENST00000524177 DOK7Q18PE1 504 aa8.6□□□□□ -1.03
CSMD1-214ENST00000524177 ERBB3P21860 1342 aa8.58□□□□□ -1.04
CSMD1-214ENST00000524177 TMEM92Q6UXU6 159 aa8.57□□□□□ -1.04
CSMD1-214ENST00000524177 MICALL2Q8IY33 904 aa8.57□□□□□ -1.04
CSMD1-214ENST00000524177 RIMBP2O15034 1052 aa8.55□□□□□ -1.04
CSMD1-214ENST00000524177 RNF25Q96BH1 459 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-214ENST00000524177 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.54□□□□□ -1.04
CSMD1-214ENST00000524177 RIOK3O14730 519 aaKnown RBP8.54□□□□□ -1.04
CSMD1-214ENST00000524177 VARS2Q5ST30 1063 aaKnown RBP8.54□□□□□ -1.04
CSMD1-214ENST00000524177 ZFP91Q96JP5 570 aaPredicted RBP8.54□□□□□ -1.04
CSMD1-214ENST00000524177 MS4A4AQ96JQ5 239 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms