RNA–Protein interactions for RNA: ENST00000524094.1

LINC01339-204, Transcript of long intergenic non-protein coding RNA 1339, humanhuman

TSL 3

Gene LINC01339, Length 269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01339-204ENST00000524094 PAK3O75914 559 aaPredicted RBP8.41□□□□□ -1.06
LINC01339-204ENST00000524094 POTEFA5A3E0 1075 aa8.4□□□□□ -1.06
LINC01339-204ENST00000524094 EHMT2Q96KQ7 1210 aa8.38□□□□□ -1.07
LINC01339-204ENST00000524094 MS4A3Q96HJ5 214 aa8.36□□□□□ -1.07
LINC01339-204ENST00000524094 ATN1P54259 1190 aaPredicted RBP8.34□□□□□ -1.07
LINC01339-204ENST00000524094 MKRN4PQ13434 485 aaPredicted RBP8.34□□□□□ -1.07
LINC01339-204ENST00000524094 CSRNP3Q8WYN3 585 aa8.32□□□□□ -1.08
LINC01339-204ENST00000524094 TMEM121BQ9BXQ6 578 aaPredicted RBP8.31□□□□□ -1.08
LINC01339-204ENST00000524094 SLAIN1Q8ND83 568 aa8.3□□□□□ -1.08
LINC01339-204ENST00000524094 SLC4A1APQ9BWU0 796 aaKnown RBP8.28□□□□□ -1.08
LINC01339-204ENST00000524094 CREBZFQ9NS37 354 aa8.27□□□□□ -1.09
LINC01339-204ENST00000524094 MARVELD3Q96A59 401 aa8.26□□□□□ -1.09
LINC01339-204ENST00000524094 KRTAP3-3Q9BYR6 98 aa8.23□□□□□ -1.09
LINC01339-204ENST00000524094 KRTAP3-2Q9BYR7 98 aa8.23□□□□□ -1.09
LINC01339-204ENST00000524094 COLQQ9Y215 455 aaPredicted RBP8.21□□□□□ -1.1
LINC01339-204ENST00000524094 SEC24BO95487 1268 aa8.2□□□□□ -1.1
LINC01339-204ENST00000524094 FOXD4L1Q9NU39 408 aa8.18□□□□□ -1.1
LINC01339-204ENST00000524094 ZBTB22O15209 634 aa8.16□□□□□ -1.1
LINC01339-204ENST00000524094 BMP2KQ9NSY1 1161 aaPredicted RBP8.15□□□□□ -1.1
LINC01339-204ENST00000524094 SNPHO15079 494 aa8.11□□□□□ -1.11
LINC01339-204ENST00000524094 RNF166Q96A37 237 aaPredicted RBP8.11□□□□□ -1.11
LINC01339-204ENST00000524094 NPM1P06748 294 aaKnown RBP eCLIP8.09□□□□□ -1.11
LINC01339-204ENST00000524094 EMP3P54852 163 aa8.08□□□□□ -1.12
LINC01339-204ENST00000524094 POTEB3A0JP26 581 aa8.07□□□□□ -1.12
LINC01339-204ENST00000524094 POTEBQ6S5H4 581 aa8.07□□□□□ -1.12
LINC01339-204ENST00000524094 HS3ST6Q96QI5 342 aa8.07□□□□□ -1.12
LINC01339-204ENST00000524094 TRPC6Q9Y210 931 aa8.05□□□□□ -1.12
LINC01339-204ENST00000524094 ATXN8OSP0DMR3 200 aa8.03□□□□□ -1.12
LINC01339-204ENST00000524094 TIE1P35590 1138 aa8.03□□□□□ -1.12
LINC01339-204ENST00000524094 FAM205CA6NFA0 338 aa8.02□□□□□ -1.13
LINC01339-204ENST00000524094 IER5LQ5T953 404 aa7.99□□□□□ -1.13
LINC01339-204ENST00000524094 TTLL13PA6NNM8 815 aa7.96□□□□□ -1.14
LINC01339-204ENST00000524094 MNX1P50219 401 aaPredicted RBP7.96□□□□□ -1.14
LINC01339-204ENST00000524094 KIF12Q96FN5 646 aa7.96□□□□□ -1.14
LINC01339-204ENST00000524094 STAG3Q9UJ98 1225 aa7.95□□□□□ -1.14
LINC01339-204ENST00000524094 MYT1LQ9UL68 1186 aa7.95□□□□□ -1.14
LINC01339-204ENST00000524094 TSPYL2Q9H2G4 693 aaPredicted RBP7.92□□□□□ -1.14
LINC01339-204ENST00000524094 TRIM35Q9UPQ4 493 aa7.92□□□□□ -1.14
LINC01339-204ENST00000524094 CCDC61Q9Y6R9 512 aa7.92□□□□□ -1.14
LINC01339-204ENST00000524094 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.88□□□□□ -1.15
LINC01339-204ENST00000524094 PLCG2P16885 1265 aa7.87□□□□□ -1.15
LINC01339-204ENST00000524094 MAP3K13O43283 966 aa7.86□□□□□ -1.15
LINC01339-204ENST00000524094 PLA2G2EQ9NZK7 142 aa7.78□□□□□ -1.16
LINC01339-204ENST00000524094 IRX5P78411 483 aaPredicted RBP7.76□□□□□ -1.17
LINC01339-204ENST00000524094 PTGER2P43116 358 aa7.71□□□□□ -1.18
LINC01339-204ENST00000524094 OCEL1Q9H607 264 aa7.69□□□□□ -1.18
LINC01339-204ENST00000524094 ERBB3P21860 1342 aa7.68□□□□□ -1.18
LINC01339-204ENST00000524094 IRX2Q9BZI1 471 aaPredicted RBP7.65□□□□□ -1.18
LINC01339-204ENST00000524094 TMEM106CQ9BVX2 250 aa7.64□□□□□ -1.19
LINC01339-204ENST00000524094 C3orf67Q6ZVT6 689 aa7.63□□□□□ -1.19
LINC01339-204ENST00000524094 SGIP1Q9BQI5 828 aa7.62□□□□□ -1.19
LINC01339-204ENST00000524094 PCDHB13Q9Y5F0 798 aa7.61□□□□□ -1.19
LINC01339-204ENST00000524094 HOXB1P14653 301 aaPredicted RBP7.6□□□□□ -1.19
LINC01339-204ENST00000524094 VARS2Q5ST30 1063 aaKnown RBP7.57□□□□□ -1.2
LINC01339-204ENST00000524094 HOXB3P14651 431 aaPredicted RBP7.54□□□□□ -1.2
LINC01339-204ENST00000524094 ZNF687Q8N1G0 1237 aa7.54□□□□□ -1.2
LINC01339-204ENST00000524094 ANKRD13DQ6ZTN6 518 aa7.53□□□□□ -1.2
LINC01339-204ENST00000524094 IFNL1Q8IU54 200 aa7.53□□□□□ -1.2
LINC01339-204ENST00000524094 ZNF710Q8N1W2 664 aa7.52□□□□□ -1.21
LINC01339-204ENST00000524094 HCSTQ9UBK5 93 aa7.52□□□□□ -1.21
LINC01339-204ENST00000524094 RASEFQ8IZ41 740 aa7.5□□□□□ -1.21
LINC01339-204ENST00000524094 L3MBTL3Q96JM7 780 aaPredicted RBP7.49□□□□□ -1.21
LINC01339-204ENST00000524094 RGS20O76081 388 aa7.48□□□□□ -1.21
LINC01339-204ENST00000524094 PDCD7Q8N8D1 485 aaKnown RBP7.44□□□□□ -1.22
LINC01339-204ENST00000524094 Q6ZNB5 142 aa7.42□□□□□ -1.22
LINC01339-204ENST00000524094 DOK7Q18PE1 504 aa7.41□□□□□ -1.22
LINC01339-204ENST00000524094 LSM11P83369 360 aaKnown RBP eCLIP7.37□□□□□ -1.23
LINC01339-204ENST00000524094 SPDYE4A6NLX3 237 aa7.35□□□□□ -1.23
LINC01339-204ENST00000524094 RIMBP2O15034 1052 aa7.35□□□□□ -1.23
LINC01339-204ENST00000524094 FKBP8Q14318 412 aa7.35□□□□□ -1.23
LINC01339-204ENST00000524094 LOC100996750A0A140TA64 210 aa7.33□□□□□ -1.24
LINC01339-204ENST00000524094 KRTAP4-6Q9BYQ5 205 aa7.33□□□□□ -1.24
LINC01339-204ENST00000524094 RTN4Q9NQC3 1192 aaKnown RBP7.32□□□□□ -1.24
LINC01339-204ENST00000524094 MKRN3Q13064 507 aaKnown RBP7.25□□□□□ -1.25
LINC01339-204ENST00000524094 ZSWIM6Q9HCJ5 1215 aa7.25□□□□□ -1.25
LINC01339-204ENST00000524094 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.25□□□□□ -1.25
LINC01339-204ENST00000524094 PLEKHG5O94827 1062 aa7.24□□□□□ -1.25
LINC01339-204ENST00000524094 A0A0G2JS52 829 aa7.22□□□□□ -1.25
LINC01339-204ENST00000524094 GPR153Q6NV75 609 aa7.22□□□□□ -1.25
LINC01339-204ENST00000524094 IFFO2Q5TF58 517 aa7.21□□□□□ -1.26
LINC01339-204ENST00000524094 LCE2BO14633 110 aa7.2□□□□□ -1.26
LINC01339-204ENST00000524094 GOLGA2Q08379 1002 aa7.2□□□□□ -1.26
LINC01339-204ENST00000524094 G3V3G9 751 aa7.19□□□□□ -1.26
LINC01339-204ENST00000524094 DCAF8Q5TAQ9 597 aa7.19□□□□□ -1.26
LINC01339-204ENST00000524094 DPY19L2Q6NUT2 758 aa7.18□□□□□ -1.26
LINC01339-204ENST00000524094 TRAF7Q6Q0C0 670 aa7.18□□□□□ -1.26
LINC01339-204ENST00000524094 BOLA1Q9Y3E2 137 aa7.17□□□□□ -1.26
LINC01339-204ENST00000524094 ZNF316A6NFI3 1004 aaPredicted RBP7.16□□□□□ -1.26
LINC01339-204ENST00000524094 PBX2P40425 430 aa7.16□□□□□ -1.26
LINC01339-204ENST00000524094 AMER1Q5JTC6 1135 aaPredicted RBP7.16□□□□□ -1.26
LINC01339-204ENST00000524094 MIER1Q8N108 512 aa7.16□□□□□ -1.26
LINC01339-204ENST00000524094 PCDHB8Q9UN66 801 aa7.15□□□□□ -1.26
LINC01339-204ENST00000524094 NUBP1P53384 320 aa7.14□□□□□ -1.27
LINC01339-204ENST00000524094 PROM2Q8N271 834 aa7.14□□□□□ -1.27
LINC01339-204ENST00000524094 ZNF775Q96BV0 537 aaPredicted RBP7.14□□□□□ -1.27
LINC01339-204ENST00000524094 POTEEQ6S8J3 1075 aa7.13□□□□□ -1.27
LINC01339-204ENST00000524094 KCTD12Q96CX2 325 aaKnown RBP7.12□□□□□ -1.27
LINC01339-204ENST00000524094 ARSIQ5FYB1 569 aa7.11□□□□□ -1.27
LINC01339-204ENST00000524094 ILDR1Q86SU0 546 aaPredicted RBP7.11□□□□□ -1.27
LINC01339-204ENST00000524094 FAM212AQ96EL1 285 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms