RNA–Protein interactions for RNA: ENST00000524032.5

LAMA4-221, Transcript of laminin subunit alpha 4, humanhuman

TSL 4

Gene LAMA4, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-221ENST00000524032 ZRANB1Q9UGI0 708 aa16.43■□□□□ 0.22
LAMA4-221ENST00000524032 TRIM41Q8WV44 630 aa16.37■□□□□ 0.21
LAMA4-221ENST00000524032 CCDC61Q9Y6R9 512 aa16.37■□□□□ 0.21
LAMA4-221ENST00000524032 RTN4Q9NQC3 1192 aaKnown RBP16.35■□□□□ 0.21
LAMA4-221ENST00000524032 PKD2Q13563 968 aa16.33■□□□□ 0.2
LAMA4-221ENST00000524032 ZNF579Q8NAF0 562 aaKnown RBP16.33■□□□□ 0.2
LAMA4-221ENST00000524032 EVX2Q03828 476 aa16.31■□□□□ 0.2
LAMA4-221ENST00000524032 ECM2O94769 699 aaPredicted RBP16.27■□□□□ 0.2
LAMA4-221ENST00000524032 PYGBP11216 843 aa16.27■□□□□ 0.2
LAMA4-221ENST00000524032 PHF12Q96QT6 1004 aa16.26■□□□□ 0.19
LAMA4-221ENST00000524032 CHRM1P11229 460 aaPredicted RBP16.25■□□□□ 0.19
LAMA4-221ENST00000524032 KIF12Q96FN5 646 aa16.21■□□□□ 0.19
LAMA4-221ENST00000524032 CLCN6P51797 869 aa16.19■□□□□ 0.18
LAMA4-221ENST00000524032 SGIP1Q9BQI5 828 aa16.16■□□□□ 0.18
LAMA4-221ENST00000524032 MAP3K13O43283 966 aa16.15■□□□□ 0.18
LAMA4-221ENST00000524032 PCDHB13Q9Y5F0 798 aa16.14■□□□□ 0.17
LAMA4-221ENST00000524032 SP7Q8TDD2 431 aaPredicted RBP16.13■□□□□ 0.17
LAMA4-221ENST00000524032 ZNF467Q7Z7K2 595 aaPredicted RBP16.11■□□□□ 0.17
LAMA4-221ENST00000524032 RGL2O15211 777 aa16.09■□□□□ 0.17
LAMA4-221ENST00000524032 MS4A3Q96HJ5 214 aa16.09■□□□□ 0.17
LAMA4-221ENST00000524032 RNF25Q96BH1 459 aaPredicted RBP16.07■□□□□ 0.16
LAMA4-221ENST00000524032 RIOK3O14730 519 aaKnown RBP16.06■□□□□ 0.16
LAMA4-221ENST00000524032 GABBR2O75899 941 aa16.05■□□□□ 0.16
LAMA4-221ENST00000524032 IFNL1Q8IU54 200 aa16.05■□□□□ 0.16
LAMA4-221ENST00000524032 GALR2O43603 387 aaPredicted RBP16.03■□□□□ 0.16
LAMA4-221ENST00000524032 PCDHB8Q9UN66 801 aa16.03■□□□□ 0.16
LAMA4-221ENST00000524032 TAOK2Q9UL54 1235 aa16.02■□□□□ 0.16
LAMA4-221ENST00000524032 VGFO15240 615 aaPredicted RBP15.97■□□□□ 0.15
LAMA4-221ENST00000524032 DCAF8L2P0C7V8 631 aa15.95■□□□□ 0.14
LAMA4-221ENST00000524032 PDAP1Q13442 181 aaKnown RBP15.95■□□□□ 0.14
LAMA4-221ENST00000524032 PSEN1P49768 467 aa15.9■□□□□ 0.14
LAMA4-221ENST00000524032 TIE1P35590 1138 aa15.89■□□□□ 0.13
LAMA4-221ENST00000524032 TRPC6Q9Y210 931 aa15.89■□□□□ 0.13
LAMA4-221ENST00000524032 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.86■□□□□ 0.13
LAMA4-221ENST00000524032 ZFP91Q96JP5 570 aaPredicted RBP15.86■□□□□ 0.13
LAMA4-221ENST00000524032 DCBLD2Q96PD2 775 aa15.85■□□□□ 0.13
LAMA4-221ENST00000524032 TMEM106CQ9BVX2 250 aa15.85■□□□□ 0.13
LAMA4-221ENST00000524032 BMP2KQ9NSY1 1161 aaPredicted RBP15.83■□□□□ 0.12
LAMA4-221ENST00000524032 TTLL13PA6NNM8 815 aa15.81■□□□□ 0.12
LAMA4-221ENST00000524032 STK25O00506 426 aa15.81■□□□□ 0.12
LAMA4-221ENST00000524032 CHGAP10645 457 aaKnown RBP15.78■□□□□ 0.12
LAMA4-221ENST00000524032 ASTLQ6HA08 431 aaPredicted RBP15.78■□□□□ 0.12
LAMA4-221ENST00000524032 HS6ST3Q8IZP7 471 aa15.78■□□□□ 0.12
LAMA4-221ENST00000524032 BCL11BQ9C0K0 894 aaPredicted RBP15.78■□□□□ 0.12
LAMA4-221ENST00000524032 ATMINO43313 823 aaPredicted RBP15.76■□□□□ 0.11
LAMA4-221ENST00000524032 STK24Q9Y6E0 443 aa15.76■□□□□ 0.11
LAMA4-221ENST00000524032 ATN1P54259 1190 aaPredicted RBP15.72■□□□□ 0.11
LAMA4-221ENST00000524032 TRIM35Q9UPQ4 493 aa15.72■□□□□ 0.11
LAMA4-221ENST00000524032 GOLGA2Q08379 1002 aa15.71■□□□□ 0.11
LAMA4-221ENST00000524032 CABP2Q9NPB3 220 aa15.71■□□□□ 0.11
LAMA4-221ENST00000524032 POTEIP0CG38 1075 aa15.68■□□□□ 0.1
LAMA4-221ENST00000524032 MKRN3Q13064 507 aaKnown RBP15.64■□□□□ 0.09
LAMA4-221ENST00000524032 DNAJC5Q9H3Z4 198 aa15.63■□□□□ 0.09
LAMA4-221ENST00000524032 EFCAB3Q8N7B9 438 aa15.61■□□□□ 0.09
LAMA4-221ENST00000524032 IER5LQ5T953 404 aa15.6■□□□□ 0.09
LAMA4-221ENST00000524032 PELP1Q8IZL8 1130 aaKnown RBP15.6■□□□□ 0.09
LAMA4-221ENST00000524032 SLC39A7Q92504 469 aa15.6■□□□□ 0.09
LAMA4-221ENST00000524032 BBXQ8WY36 941 aaPredicted RBP15.57■□□□□ 0.08
LAMA4-221ENST00000524032 SOX12O15370 315 aa15.55■□□□□ 0.08
LAMA4-221ENST00000524032 C7P10643 843 aa15.54■□□□□ 0.08
LAMA4-221ENST00000524032 METRNQ9UJH8 293 aa15.53■□□□□ 0.08
LAMA4-221ENST00000524032 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.51■□□□□ 0.07
LAMA4-221ENST00000524032 NKX1-1Q15270 411 aaPredicted RBP15.5■□□□□ 0.07
LAMA4-221ENST00000524032 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.5■□□□□ 0.07
LAMA4-221ENST00000524032 NLRP6P59044 892 aa15.48■□□□□ 0.07
LAMA4-221ENST00000524032 IRX5P78411 483 aaPredicted RBP15.48■□□□□ 0.07
LAMA4-221ENST00000524032 MFRPQ9BY79 579 aa15.48■□□□□ 0.07
LAMA4-221ENST00000524032 SEC24BO95487 1268 aa15.47■□□□□ 0.07
LAMA4-221ENST00000524032 PLCG2P16885 1265 aa15.47■□□□□ 0.07
LAMA4-221ENST00000524032 RYDENQ9NUL5 291 aaKnown RBP15.47■□□□□ 0.07
LAMA4-221ENST00000524032 PHF8Q9UPP1 1060 aa15.47■□□□□ 0.07
LAMA4-221ENST00000524032 OCEL1Q9H607 264 aa15.45■□□□□ 0.06
LAMA4-221ENST00000524032 ILDR1Q86SU0 546 aaPredicted RBP15.44■□□□□ 0.06
LAMA4-221ENST00000524032 FBXO22Q8NEZ5 403 aa15.42■□□□□ 0.06
LAMA4-221ENST00000524032 PDCD7Q8N8D1 485 aaKnown RBP15.4■□□□□ 0.06
LAMA4-221ENST00000524032 COLQQ9Y215 455 aaPredicted RBP15.4■□□□□ 0.06
LAMA4-221ENST00000524032 POTEFA5A3E0 1075 aa15.37■□□□□ 0.05
LAMA4-221ENST00000524032 MS4A4AQ96JQ5 239 aa15.37■□□□□ 0.05
LAMA4-221ENST00000524032 GTPBP6O43824 516 aaPredicted RBP15.36■□□□□ 0.05
LAMA4-221ENST00000524032 SPRYD3Q8NCJ5 442 aa15.36■□□□□ 0.05
LAMA4-221ENST00000524032 PAXIP1Q6ZW49 1069 aaPredicted RBP15.34■□□□□ 0.05
LAMA4-221ENST00000524032 CFAP44Q96MT7 982 aa15.32■□□□□ 0.04
LAMA4-221ENST00000524032 DPY19L2Q6NUT2 758 aa15.29■□□□□ 0.04
LAMA4-221ENST00000524032 L3MBTL3Q96JM7 780 aaPredicted RBP15.28■□□□□ 0.04
LAMA4-221ENST00000524032 PLCB2Q00722 1185 aa15.27■□□□□ 0.04
LAMA4-221ENST00000524032 G3V3G9 751 aa15.26■□□□□ 0.03
LAMA4-221ENST00000524032 NISCHQ9Y2I1 1504 aa15.26■□□□□ 0.03
LAMA4-221ENST00000524032 BOLA1Q9Y3E2 137 aa15.24■□□□□ 0.03
LAMA4-221ENST00000524032 PPP1R37O75864 691 aa15.23■□□□□ 0.03
LAMA4-221ENST00000524032 MICALL2Q8IY33 904 aa15.19■□□□□ 0.02
LAMA4-221ENST00000524032 POTEB2H3BUK9 544 aa15.18■□□□□ 0.02
LAMA4-221ENST00000524032 TMEM121BQ9BXQ6 578 aaPredicted RBP15.16■□□□□ 0.02
LAMA4-221ENST00000524032 C3orf67Q6ZVT6 689 aa15.14■□□□□ 0.01
LAMA4-221ENST00000524032 LHX8Q68G74 356 aa15.13■□□□□ 0.01
LAMA4-221ENST00000524032 MAMSTRQ6ZN01 415 aa15.13■□□□□ 0.01
LAMA4-221ENST00000524032 POTEJP0CG39 1038 aa15.11■□□□□ 0.01
LAMA4-221ENST00000524032 SCUBE2Q9NQ36 999 aa15.1■□□□□ 0.01
LAMA4-221ENST00000524032 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.08■□□□□ 0
LAMA4-221ENST00000524032 HAP1P54257 671 aaPredicted RBP15.03■□□□□ -0
LAMA4-221ENST00000524032 TSHZ2Q9NRE2 1034 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms