RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 OTUD5Q96G74 571 aa15.3■□□□□ 0.04
SDCBP-210ENST00000522843 ASTLQ6HA08 431 aaPredicted RBP15.29■□□□□ 0.04
SDCBP-210ENST00000522843 PLEKHG5O94827 1062 aa15.28■□□□□ 0.04
SDCBP-210ENST00000522843 MIER1Q8N108 512 aa15.27■□□□□ 0.04
SDCBP-210ENST00000522843 CCDC61Q9Y6R9 512 aa15.27■□□□□ 0.04
SDCBP-210ENST00000522843 ATMINO43313 823 aaPredicted RBP15.25■□□□□ 0.03
SDCBP-210ENST00000522843 C7P10643 843 aa15.21■□□□□ 0.03
SDCBP-210ENST00000522843 SLC39A7Q92504 469 aa15.21■□□□□ 0.03
SDCBP-210ENST00000522843 METRNQ9UJH8 293 aa15.2■□□□□ 0.02
SDCBP-210ENST00000522843 KIF12Q96FN5 646 aa15.19■□□□□ 0.02
SDCBP-210ENST00000522843 RASEFQ8IZ41 740 aa15.13■□□□□ 0.01
SDCBP-210ENST00000522843 RB1CC1Q8TDY2 1594 aa15.13■□□□□ 0.01
SDCBP-210ENST00000522843 ATN1P54259 1190 aaPredicted RBP15.12■□□□□ 0.01
SDCBP-210ENST00000522843 PLCD3Q8N3E9 789 aa15.11■□□□□ 0.01
SDCBP-210ENST00000522843 MAP3K13O43283 966 aa15.09■□□□□ 0.01
SDCBP-210ENST00000522843 POTEJP0CG39 1038 aa15.06■□□□□ 0
SDCBP-210ENST00000522843 BMP2KQ9NSY1 1161 aaPredicted RBP15.06■□□□□ 0
SDCBP-210ENST00000522843 MAMSTRQ6ZN01 415 aa15.05■□□□□ -0
SDCBP-210ENST00000522843 TRPC6Q9Y210 931 aa15.04■□□□□ -0
SDCBP-210ENST00000522843 TIE1P35590 1138 aa15.03■□□□□ -0
SDCBP-210ENST00000522843 ZBTB47Q9UFB7 747 aaPredicted RBP15.03■□□□□ -0
SDCBP-210ENST00000522843 PLSCR2Q9NRY7 297 aa15□□□□□ -0.01
SDCBP-210ENST00000522843 POTEMA6NI47 508 aa14.96□□□□□ -0.01
SDCBP-210ENST00000522843 NUBP1P53384 320 aa14.96□□□□□ -0.01
SDCBP-210ENST00000522843 FKBP8Q14318 412 aa14.96□□□□□ -0.01
SDCBP-210ENST00000522843 SGIP1Q9BQI5 828 aa14.96□□□□□ -0.01
SDCBP-210ENST00000522843 POTEFA5A3E0 1075 aa14.94□□□□□ -0.02
SDCBP-210ENST00000522843 SCUBE2Q9NQ36 999 aa14.94□□□□□ -0.02
SDCBP-210ENST00000522843 TTLL13PA6NNM8 815 aa14.93□□□□□ -0.02
SDCBP-210ENST00000522843 NACADO15069 1562 aa14.93□□□□□ -0.02
SDCBP-210ENST00000522843 PCDHB13Q9Y5F0 798 aa14.92□□□□□ -0.02
SDCBP-210ENST00000522843 POTEGQ6S5H5 508 aa14.91□□□□□ -0.02
SDCBP-210ENST00000522843 SEC24BO95487 1268 aa14.87□□□□□ -0.03
SDCBP-210ENST00000522843 FAM212AQ96EL1 285 aa14.87□□□□□ -0.03
SDCBP-210ENST00000522843 UNC13AQ9UPW8 1703 aa14.86□□□□□ -0.03
SDCBP-210ENST00000522843 TRIM35Q9UPQ4 493 aa14.84□□□□□ -0.03
SDCBP-210ENST00000522843 COLQQ9Y215 455 aaPredicted RBP14.84□□□□□ -0.03
SDCBP-210ENST00000522843 IER5LQ5T953 404 aa14.82□□□□□ -0.04
SDCBP-210ENST00000522843 IFNL1Q8IU54 200 aa14.82□□□□□ -0.04
SDCBP-210ENST00000522843 BICRAQ9NZM4 1560 aa14.81□□□□□ -0.04
SDCBP-210ENST00000522843 FAM163AQ96GL9 167 aaPredicted RBP14.8□□□□□ -0.04
SDCBP-210ENST00000522843 PCDH10Q9P2E7 1040 aa14.78□□□□□ -0.04
SDCBP-210ENST00000522843 LCE2DQ5TA82 110 aaPredicted RBP14.75□□□□□ -0.05
SDCBP-210ENST00000522843 FBXO3Q9UK99 471 aa14.75□□□□□ -0.05
SDCBP-210ENST00000522843 TMEM106CQ9BVX2 250 aa14.74□□□□□ -0.05
SDCBP-210ENST00000522843 DCAF8Q5TAQ9 597 aa14.73□□□□□ -0.05
SDCBP-210ENST00000522843 DCAF8L2P0C7V8 631 aa14.72□□□□□ -0.05
SDCBP-210ENST00000522843 PYGBP11216 843 aa14.66□□□□□ -0.06
SDCBP-210ENST00000522843 DNAJC5Q9H3Z4 198 aa14.66□□□□□ -0.06
SDCBP-210ENST00000522843 PLCG2P16885 1265 aa14.64□□□□□ -0.07
SDCBP-210ENST00000522843 IRX5P78411 483 aaPredicted RBP14.61□□□□□ -0.07
SDCBP-210ENST00000522843 CECR2Q9BXF3 1484 aa14.61□□□□□ -0.07
SDCBP-210ENST00000522843 SLAIN1Q8ND83 568 aa14.59□□□□□ -0.07
SDCBP-210ENST00000522843 CC2D2AQ9P2K1 1620 aa14.59□□□□□ -0.07
SDCBP-210ENST00000522843 MYO15BQ96JP2 1530 aa14.58□□□□□ -0.08
SDCBP-210ENST00000522843 PCDHB8Q9UN66 801 aa14.58□□□□□ -0.08
SDCBP-210ENST00000522843 KLHL34Q8N239 644 aa14.56□□□□□ -0.08
SDCBP-210ENST00000522843 OCEL1Q9H607 264 aa14.55□□□□□ -0.08
SDCBP-210ENST00000522843 VASPP50552 380 aaPredicted RBP14.54□□□□□ -0.08
SDCBP-210ENST00000522843 GSE1Q14687 1217 aa14.53□□□□□ -0.08
SDCBP-210ENST00000522843 ZNF467Q7Z7K2 595 aaPredicted RBP14.47□□□□□ -0.09
SDCBP-210ENST00000522843 SHROOM4Q9ULL8 1493 aa14.46□□□□□ -0.09
SDCBP-210ENST00000522843 ST18O60284 1047 aa14.46□□□□□ -0.09
SDCBP-210ENST00000522843 EIF4G1Q04637 1599 aaKnown RBP14.44□□□□□ -0.1
SDCBP-210ENST00000522843 CHRM1P11229 460 aaPredicted RBP14.44□□□□□ -0.1
SDCBP-210ENST00000522843 CDAN1Q8IWY9 1227 aa14.43□□□□□ -0.1
SDCBP-210ENST00000522843 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.41□□□□□ -0.1
SDCBP-210ENST00000522843 GOLGA2Q08379 1002 aa14.39□□□□□ -0.11
SDCBP-210ENST00000522843 MKRN3Q13064 507 aaKnown RBP14.37□□□□□ -0.11
SDCBP-210ENST00000522843 SNPHO15079 494 aa14.35□□□□□ -0.11
SDCBP-210ENST00000522843 PDCD7Q8N8D1 485 aaKnown RBP14.35□□□□□ -0.11
SDCBP-210ENST00000522843 PSEN1P49768 467 aa14.34□□□□□ -0.11
SDCBP-210ENST00000522843 TMEM121BQ9BXQ6 578 aaPredicted RBP14.32□□□□□ -0.12
SDCBP-210ENST00000522843 L3MBTL3Q96JM7 780 aaPredicted RBP14.31□□□□□ -0.12
SDCBP-210ENST00000522843 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.29□□□□□ -0.12
SDCBP-210ENST00000522843 SCRIBQ14160 1630 aa14.28□□□□□ -0.12
SDCBP-210ENST00000522843 IFNLR1Q8IU57 520 aaPredicted RBP14.28□□□□□ -0.12
SDCBP-210ENST00000522843 SPOCK2Q92563 424 aa14.28□□□□□ -0.12
SDCBP-210ENST00000522843 C3orf67Q6ZVT6 689 aa14.27□□□□□ -0.13
SDCBP-210ENST00000522843 PDAP1Q13442 181 aaKnown RBP14.26□□□□□ -0.13
SDCBP-210ENST00000522843 CIZ1Q9ULV3 898 aaPredicted RBP14.25□□□□□ -0.13
SDCBP-210ENST00000522843 ZCCHC6Q5VYS8 1495 aaKnown RBP14.24□□□□□ -0.13
SDCBP-210ENST00000522843 DCAF1Q9Y4B6 1507 aa14.23□□□□□ -0.13
SDCBP-210ENST00000522843 ILDR1Q86SU0 546 aaPredicted RBP14.2□□□□□ -0.14
SDCBP-210ENST00000522843 MARVELD3Q96A59 401 aa14.19□□□□□ -0.14
SDCBP-210ENST00000522843 CABP2Q9NPB3 220 aa14.16□□□□□ -0.14
SDCBP-210ENST00000522843 DPY19L2Q6NUT2 758 aa14.13□□□□□ -0.15
SDCBP-210ENST00000522843 CUX2O14529 1486 aa14.09□□□□□ -0.15
SDCBP-210ENST00000522843 G3V3G9 751 aa14.08□□□□□ -0.16
SDCBP-210ENST00000522843 SPNS2Q8IVW8 549 aa14.08□□□□□ -0.16
SDCBP-210ENST00000522843 BOLA1Q9Y3E2 137 aa14.08□□□□□ -0.16
SDCBP-210ENST00000522843 EMP3P54852 163 aa14.07□□□□□ -0.16
SDCBP-210ENST00000522843 MMRN1Q13201 1228 aa14.05□□□□□ -0.16
SDCBP-210ENST00000522843 TRIM41Q8WV44 630 aa14.05□□□□□ -0.16
SDCBP-210ENST00000522843 HS3ST6Q96QI5 342 aa13.99□□□□□ -0.17
SDCBP-210ENST00000522843 FAM205CA6NFA0 338 aa13.98□□□□□ -0.17
SDCBP-210ENST00000522843 EFCAB3Q8N7B9 438 aa13.97□□□□□ -0.17
SDCBP-210ENST00000522843 POTEB3A0JP26 581 aa13.96□□□□□ -0.17
SDCBP-210ENST00000522843 POTEBQ6S5H4 581 aa13.96□□□□□ -0.17
SDCBP-210ENST00000522843 HOXB3P14651 431 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms