RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 GABBR2O75899 941 aa13.02□□□□□ -0.33
HMGB1P1-201ENST00000522557 CCDC61Q9Y6R9 512 aa13.02□□□□□ -0.33
HMGB1P1-201ENST00000522557 DCAF8Q5TAQ9 597 aa13.01□□□□□ -0.33
HMGB1P1-201ENST00000522557 FAM212AQ96EL1 285 aa12.99□□□□□ -0.33
HMGB1P1-201ENST00000522557 KIF12Q96FN5 646 aa12.91□□□□□ -0.34
HMGB1P1-201ENST00000522557 GALR2O43603 387 aaPredicted RBP12.9□□□□□ -0.34
HMGB1P1-201ENST00000522557 GSE1Q14687 1217 aa12.9□□□□□ -0.34
HMGB1P1-201ENST00000522557 CIZ1Q9ULV3 898 aaPredicted RBP12.9□□□□□ -0.34
HMGB1P1-201ENST00000522557 CLCN6P51797 869 aa12.89□□□□□ -0.35
HMGB1P1-201ENST00000522557 MAP3K13O43283 966 aa12.88□□□□□ -0.35
HMGB1P1-201ENST00000522557 PYGBP11216 843 aa12.87□□□□□ -0.35
HMGB1P1-201ENST00000522557 MS4A3Q96HJ5 214 aa12.86□□□□□ -0.35
HMGB1P1-201ENST00000522557 PCDHB13Q9Y5F0 798 aa12.8□□□□□ -0.36
HMGB1P1-201ENST00000522557 POTEIP0CG38 1075 aa12.77□□□□□ -0.37
HMGB1P1-201ENST00000522557 TRPC6Q9Y210 931 aa12.77□□□□□ -0.37
HMGB1P1-201ENST00000522557 CHRM1P11229 460 aaPredicted RBP12.76□□□□□ -0.37
HMGB1P1-201ENST00000522557 IFNL1Q8IU54 200 aa12.76□□□□□ -0.37
HMGB1P1-201ENST00000522557 DCBLD2Q96PD2 775 aa12.76□□□□□ -0.37
HMGB1P1-201ENST00000522557 SGIP1Q9BQI5 828 aa12.76□□□□□ -0.37
HMGB1P1-201ENST00000522557 PCDHB8Q9UN66 801 aa12.73□□□□□ -0.37
HMGB1P1-201ENST00000522557 PKD2Q13563 968 aa12.68□□□□□ -0.38
HMGB1P1-201ENST00000522557 TRIM41Q8WV44 630 aa12.66□□□□□ -0.38
HMGB1P1-201ENST00000522557 BMP2KQ9NSY1 1161 aaPredicted RBP12.66□□□□□ -0.38
HMGB1P1-201ENST00000522557 ATMINO43313 823 aaPredicted RBP12.65□□□□□ -0.38
HMGB1P1-201ENST00000522557 PELP1Q8IZL8 1130 aaKnown RBP12.64□□□□□ -0.39
HMGB1P1-201ENST00000522557 TIE1P35590 1138 aa12.63□□□□□ -0.39
HMGB1P1-201ENST00000522557 ASTLQ6HA08 431 aaPredicted RBP12.63□□□□□ -0.39
HMGB1P1-201ENST00000522557 ZNF467Q7Z7K2 595 aaPredicted RBP12.63□□□□□ -0.39
HMGB1P1-201ENST00000522557 ATN1P54259 1190 aaPredicted RBP12.62□□□□□ -0.39
HMGB1P1-201ENST00000522557 TTLL13PA6NNM8 815 aa12.61□□□□□ -0.39
HMGB1P1-201ENST00000522557 ECM2O94769 699 aaPredicted RBP12.61□□□□□ -0.39
HMGB1P1-201ENST00000522557 RNF25Q96BH1 459 aaPredicted RBP12.59□□□□□ -0.39
HMGB1P1-201ENST00000522557 TMEM106CQ9BVX2 250 aa12.58□□□□□ -0.4
HMGB1P1-201ENST00000522557 PSEN1P49768 467 aa12.55□□□□□ -0.4
HMGB1P1-201ENST00000522557 RIOK3O14730 519 aaKnown RBP12.53□□□□□ -0.4
HMGB1P1-201ENST00000522557 PDAP1Q13442 181 aaKnown RBP12.53□□□□□ -0.4
HMGB1P1-201ENST00000522557 RGL2O15211 777 aa12.52□□□□□ -0.41
HMGB1P1-201ENST00000522557 TRIM35Q9UPQ4 493 aa12.52□□□□□ -0.41
HMGB1P1-201ENST00000522557 RTN4Q9NQC3 1192 aaKnown RBP12.51□□□□□ -0.41
HMGB1P1-201ENST00000522557 SLC39A7Q92504 469 aa12.47□□□□□ -0.41
HMGB1P1-201ENST00000522557 AMER1Q5JTC6 1135 aaPredicted RBP12.46□□□□□ -0.41
HMGB1P1-201ENST00000522557 METRNQ9UJH8 293 aa12.46□□□□□ -0.41
HMGB1P1-201ENST00000522557 C7P10643 843 aa12.45□□□□□ -0.42
HMGB1P1-201ENST00000522557 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.44□□□□□ -0.42
HMGB1P1-201ENST00000522557 VGFO15240 615 aaPredicted RBP12.44□□□□□ -0.42
HMGB1P1-201ENST00000522557 ZFP91Q96JP5 570 aaPredicted RBP12.44□□□□□ -0.42
HMGB1P1-201ENST00000522557 POTEFA5A3E0 1075 aa12.41□□□□□ -0.42
HMGB1P1-201ENST00000522557 CABP2Q9NPB3 220 aa12.41□□□□□ -0.42
HMGB1P1-201ENST00000522557 COLQQ9Y215 455 aaPredicted RBP12.39□□□□□ -0.43
HMGB1P1-201ENST00000522557 POTEB2H3BUK9 544 aa12.38□□□□□ -0.43
HMGB1P1-201ENST00000522557 IER5LQ5T953 404 aa12.38□□□□□ -0.43
HMGB1P1-201ENST00000522557 LHX8Q68G74 356 aa12.38□□□□□ -0.43
HMGB1P1-201ENST00000522557 GOLGA2Q08379 1002 aa12.37□□□□□ -0.43
HMGB1P1-201ENST00000522557 TAOK2Q9UL54 1235 aa12.36□□□□□ -0.43
HMGB1P1-201ENST00000522557 SEC24BO95487 1268 aa12.35□□□□□ -0.43
HMGB1P1-201ENST00000522557 MKRN3Q13064 507 aaKnown RBP12.35□□□□□ -0.43
HMGB1P1-201ENST00000522557 IRX5P78411 483 aaPredicted RBP12.34□□□□□ -0.43
HMGB1P1-201ENST00000522557 BCL11BQ9C0K0 894 aaPredicted RBP12.34□□□□□ -0.43
HMGB1P1-201ENST00000522557 EFCAB3Q8N7B9 438 aa12.33□□□□□ -0.44
HMGB1P1-201ENST00000522557 STK25O00506 426 aa12.32□□□□□ -0.44
HMGB1P1-201ENST00000522557 STK24Q9Y6E0 443 aa12.32□□□□□ -0.44
HMGB1P1-201ENST00000522557 POTEJP0CG39 1038 aa12.3□□□□□ -0.44
HMGB1P1-201ENST00000522557 PLCG2P16885 1265 aa12.29□□□□□ -0.44
HMGB1P1-201ENST00000522557 OCEL1Q9H607 264 aa12.29□□□□□ -0.44
HMGB1P1-201ENST00000522557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.28□□□□□ -0.44
HMGB1P1-201ENST00000522557 PDCD7Q8N8D1 485 aaKnown RBP12.25□□□□□ -0.45
HMGB1P1-201ENST00000522557 DCAF8L2P0C7V8 631 aa12.24□□□□□ -0.45
HMGB1P1-201ENST00000522557 CHGAP10645 457 aaKnown RBP12.24□□□□□ -0.45
HMGB1P1-201ENST00000522557 ILDR1Q86SU0 546 aaPredicted RBP12.23□□□□□ -0.45
HMGB1P1-201ENST00000522557 DPY19L2Q6NUT2 758 aa12.22□□□□□ -0.45
HMGB1P1-201ENST00000522557 SOX12O15370 315 aa12.21□□□□□ -0.45
HMGB1P1-201ENST00000522557 PHF8Q9UPP1 1060 aa12.21□□□□□ -0.45
HMGB1P1-201ENST00000522557 HS6ST3Q8IZP7 471 aa12.2□□□□□ -0.46
HMGB1P1-201ENST00000522557 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
HMGB1P1-201ENST00000522557 MS4A4AQ96JQ5 239 aa12.15□□□□□ -0.46
HMGB1P1-201ENST00000522557 MFRPQ9BY79 579 aa12.15□□□□□ -0.46
HMGB1P1-201ENST00000522557 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
HMGB1P1-201ENST00000522557 NLRP6P59044 892 aa12.12□□□□□ -0.47
HMGB1P1-201ENST00000522557 MAMSTRQ6ZN01 415 aa12.12□□□□□ -0.47
HMGB1P1-201ENST00000522557 L3MBTL3Q96JM7 780 aaPredicted RBP12.11□□□□□ -0.47
HMGB1P1-201ENST00000522557 NKX1-1Q15270 411 aaPredicted RBP12.1□□□□□ -0.47
HMGB1P1-201ENST00000522557 SCUBE2Q9NQ36 999 aa12.09□□□□□ -0.47
HMGB1P1-201ENST00000522557 SLC24A1O60721 1099 aa12.08□□□□□ -0.48
HMGB1P1-201ENST00000522557 DNAJC5Q9H3Z4 198 aa12.07□□□□□ -0.48
HMGB1P1-201ENST00000522557 BOLA1Q9Y3E2 137 aa12.06□□□□□ -0.48
HMGB1P1-201ENST00000522557 G3V3G9 751 aa12.02□□□□□ -0.49
HMGB1P1-201ENST00000522557 PPP1R37O75864 691 aa12.02□□□□□ -0.49
HMGB1P1-201ENST00000522557 TMEM121BQ9BXQ6 578 aaPredicted RBP12.01□□□□□ -0.49
HMGB1P1-201ENST00000522557 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.01□□□□□ -0.49
HMGB1P1-201ENST00000522557 MICALL2Q8IY33 904 aa12□□□□□ -0.49
HMGB1P1-201ENST00000522557 SLAIN1Q8ND83 568 aa12□□□□□ -0.49
HMGB1P1-201ENST00000522557 C3orf67Q6ZVT6 689 aa11.99□□□□□ -0.49
HMGB1P1-201ENST00000522557 GTPBP6O43824 516 aaPredicted RBP11.95□□□□□ -0.5
HMGB1P1-201ENST00000522557 BBXQ8WY36 941 aaPredicted RBP11.93□□□□□ -0.5
HMGB1P1-201ENST00000522557 TMEM92Q6UXU6 159 aa11.91□□□□□ -0.5
HMGB1P1-201ENST00000522557 RYDENQ9NUL5 291 aaKnown RBP11.89□□□□□ -0.51
HMGB1P1-201ENST00000522557 FAM163AQ96GL9 167 aaPredicted RBP11.83□□□□□ -0.52
HMGB1P1-201ENST00000522557 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.82□□□□□ -0.52
HMGB1P1-201ENST00000522557 SPRYD3Q8NCJ5 442 aa11.79□□□□□ -0.52
HMGB1P1-201ENST00000522557 C2orf72A6NCS6 295 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms