RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 FAM212AQ96EL1 285 aa16.94■□□□□ 0.3
NUDCD1-204ENST00000521439 ZNF579Q8NAF0 562 aaKnown RBP16.91■□□□□ 0.3
NUDCD1-204ENST00000521439 DCAF8Q5TAQ9 597 aa16.85■□□□□ 0.29
NUDCD1-204ENST00000521439 CCDC61Q9Y6R9 512 aa16.85■□□□□ 0.29
NUDCD1-204ENST00000521439 GSE1Q14687 1217 aa16.84■□□□□ 0.29
NUDCD1-204ENST00000521439 CLCN6P51797 869 aa16.83■□□□□ 0.28
NUDCD1-204ENST00000521439 PKD2Q13563 968 aa16.79■□□□□ 0.28
NUDCD1-204ENST00000521439 PHF12Q96QT6 1004 aa16.79■□□□□ 0.28
NUDCD1-204ENST00000521439 CIZ1Q9ULV3 898 aaPredicted RBP16.75■□□□□ 0.27
NUDCD1-204ENST00000521439 SLC24A1O60721 1099 aa16.74■□□□□ 0.27
NUDCD1-204ENST00000521439 GABBR2O75899 941 aa16.74■□□□□ 0.27
NUDCD1-204ENST00000521439 KIF12Q96FN5 646 aa16.69■□□□□ 0.26
NUDCD1-204ENST00000521439 PYGBP11216 843 aa16.64■□□□□ 0.25
NUDCD1-204ENST00000521439 MAP3K13O43283 966 aa16.63■□□□□ 0.25
NUDCD1-204ENST00000521439 TRIM41Q8WV44 630 aa16.63■□□□□ 0.25
NUDCD1-204ENST00000521439 SGIP1Q9BQI5 828 aa16.63■□□□□ 0.25
NUDCD1-204ENST00000521439 GALR2O43603 387 aaPredicted RBP16.61■□□□□ 0.25
NUDCD1-204ENST00000521439 MS4A3Q96HJ5 214 aa16.61■□□□□ 0.25
NUDCD1-204ENST00000521439 CHRM1P11229 460 aaPredicted RBP16.6■□□□□ 0.25
NUDCD1-204ENST00000521439 ECM2O94769 699 aaPredicted RBP16.59■□□□□ 0.25
NUDCD1-204ENST00000521439 DCAF8L2P0C7V8 631 aa16.59■□□□□ 0.25
NUDCD1-204ENST00000521439 PCDHB13Q9Y5F0 798 aa16.59■□□□□ 0.25
NUDCD1-204ENST00000521439 IFNL1Q8IU54 200 aa16.5■□□□□ 0.23
NUDCD1-204ENST00000521439 ZNF467Q7Z7K2 595 aaPredicted RBP16.48■□□□□ 0.23
NUDCD1-204ENST00000521439 DCBLD2Q96PD2 775 aa16.48■□□□□ 0.23
NUDCD1-204ENST00000521439 PCDHB8Q9UN66 801 aa16.42■□□□□ 0.22
NUDCD1-204ENST00000521439 RGL2O15211 777 aa16.41■□□□□ 0.22
NUDCD1-204ENST00000521439 TIE1P35590 1138 aa16.4■□□□□ 0.22
NUDCD1-204ENST00000521439 TRPC6Q9Y210 931 aa16.39■□□□□ 0.21
NUDCD1-204ENST00000521439 POTEIP0CG38 1075 aa16.36■□□□□ 0.21
NUDCD1-204ENST00000521439 ASTLQ6HA08 431 aaPredicted RBP16.35■□□□□ 0.21
NUDCD1-204ENST00000521439 PLCB2Q00722 1185 aa16.34■□□□□ 0.21
NUDCD1-204ENST00000521439 BMP2KQ9NSY1 1161 aaPredicted RBP16.34■□□□□ 0.21
NUDCD1-204ENST00000521439 RNF25Q96BH1 459 aaPredicted RBP16.33■□□□□ 0.2
NUDCD1-204ENST00000521439 RIOK3O14730 519 aaKnown RBP16.32■□□□□ 0.2
NUDCD1-204ENST00000521439 ATMINO43313 823 aaPredicted RBP16.32■□□□□ 0.2
NUDCD1-204ENST00000521439 TTLL13PA6NNM8 815 aa16.3■□□□□ 0.2
NUDCD1-204ENST00000521439 PDAP1Q13442 181 aaKnown RBP16.3■□□□□ 0.2
NUDCD1-204ENST00000521439 TMEM106CQ9BVX2 250 aa16.29■□□□□ 0.2
NUDCD1-204ENST00000521439 PSEN1P49768 467 aa16.27■□□□□ 0.2
NUDCD1-204ENST00000521439 ATN1P54259 1190 aaPredicted RBP16.26■□□□□ 0.19
NUDCD1-204ENST00000521439 TAOK2Q9UL54 1235 aa16.26■□□□□ 0.19
NUDCD1-204ENST00000521439 VGFO15240 615 aaPredicted RBP16.25■□□□□ 0.19
NUDCD1-204ENST00000521439 BBXQ8WY36 941 aaPredicted RBP16.24■□□□□ 0.19
NUDCD1-204ENST00000521439 TRIM35Q9UPQ4 493 aa16.2■□□□□ 0.18
NUDCD1-204ENST00000521439 PELP1Q8IZL8 1130 aaKnown RBP16.19■□□□□ 0.18
NUDCD1-204ENST00000521439 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.19■□□□□ 0.18
NUDCD1-204ENST00000521439 SLC39A7Q92504 469 aa16.17■□□□□ 0.18
NUDCD1-204ENST00000521439 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.15■□□□□ 0.18
NUDCD1-204ENST00000521439 CHGAP10645 457 aaKnown RBP16.15■□□□□ 0.18
NUDCD1-204ENST00000521439 ZFP91Q96JP5 570 aaPredicted RBP16.15■□□□□ 0.18
NUDCD1-204ENST00000521439 C7P10643 843 aa16.12■□□□□ 0.17
NUDCD1-204ENST00000521439 GOLGA2Q08379 1002 aa16.12■□□□□ 0.17
NUDCD1-204ENST00000521439 IER5LQ5T953 404 aa16.1■□□□□ 0.17
NUDCD1-204ENST00000521439 METRNQ9UJH8 293 aa16.1■□□□□ 0.17
NUDCD1-204ENST00000521439 HAP1P54257 671 aaPredicted RBP16.09■□□□□ 0.17
NUDCD1-204ENST00000521439 CABP2Q9NPB3 220 aa16.08■□□□□ 0.16
NUDCD1-204ENST00000521439 HS6ST3Q8IZP7 471 aa16.06■□□□□ 0.16
NUDCD1-204ENST00000521439 MKRN3Q13064 507 aaKnown RBP16.05■□□□□ 0.16
NUDCD1-204ENST00000521439 PAXIP1Q6ZW49 1069 aaPredicted RBP16.05■□□□□ 0.16
NUDCD1-204ENST00000521439 STK25O00506 426 aa16.04■□□□□ 0.16
NUDCD1-204ENST00000521439 BCL11BQ9C0K0 894 aaPredicted RBP16.04■□□□□ 0.16
NUDCD1-204ENST00000521439 STK24Q9Y6E0 443 aa16.02■□□□□ 0.16
NUDCD1-204ENST00000521439 CFAP44Q96MT7 982 aa16.01■□□□□ 0.15
NUDCD1-204ENST00000521439 SEC24BO95487 1268 aa16■□□□□ 0.15
NUDCD1-204ENST00000521439 SPRYD3Q8NCJ5 442 aa15.99■□□□□ 0.15
NUDCD1-204ENST00000521439 IRX5P78411 483 aaPredicted RBP15.96■□□□□ 0.15
NUDCD1-204ENST00000521439 EFCAB3Q8N7B9 438 aa15.96■□□□□ 0.15
NUDCD1-204ENST00000521439 DNAJC5Q9H3Z4 198 aa15.96■□□□□ 0.15
NUDCD1-204ENST00000521439 PLCG2P16885 1265 aa15.95■□□□□ 0.14
NUDCD1-204ENST00000521439 POTEFA5A3E0 1075 aa15.94■□□□□ 0.14
NUDCD1-204ENST00000521439 OCEL1Q9H607 264 aa15.93■□□□□ 0.14
NUDCD1-204ENST00000521439 COLQQ9Y215 455 aaPredicted RBP15.93■□□□□ 0.14
NUDCD1-204ENST00000521439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.91■□□□□ 0.141e-6■■■■□ 20.7
NUDCD1-204ENST00000521439 SOX12O15370 315 aa15.9■□□□□ 0.14
NUDCD1-204ENST00000521439 LHX8Q68G74 356 aa15.89■□□□□ 0.13
NUDCD1-204ENST00000521439 VSIG10Q8N0Z9 540 aa15.88■□□□□ 0.13
NUDCD1-204ENST00000521439 ILDR1Q86SU0 546 aaPredicted RBP15.87■□□□□ 0.13
NUDCD1-204ENST00000521439 PDCD7Q8N8D1 485 aaKnown RBP15.85■□□□□ 0.13
NUDCD1-204ENST00000521439 POTEB2H3BUK9 544 aa15.83■□□□□ 0.12
NUDCD1-204ENST00000521439 NKX1-1Q15270 411 aaPredicted RBP15.82■□□□□ 0.12
NUDCD1-204ENST00000521439 NLRP6P59044 892 aa15.79■□□□□ 0.12
NUDCD1-204ENST00000521439 PHF8Q9UPP1 1060 aa15.79■□□□□ 0.12
NUDCD1-204ENST00000521439 MFRPQ9BY79 579 aa15.77■□□□□ 0.12
NUDCD1-204ENST00000521439 TSHZ2Q9NRE2 1034 aa15.76■□□□□ 0.11
NUDCD1-204ENST00000521439 MAMSTRQ6ZN01 415 aa15.74■□□□□ 0.11
NUDCD1-204ENST00000521439 L3MBTL3Q96JM7 780 aaPredicted RBP15.74■□□□□ 0.11
NUDCD1-204ENST00000521439 GTPBP6O43824 516 aaPredicted RBP15.73■□□□□ 0.11
NUDCD1-204ENST00000521439 POTEJP0CG39 1038 aa15.73■□□□□ 0.11
NUDCD1-204ENST00000521439 FBXO22Q8NEZ5 403 aa15.73■□□□□ 0.11
NUDCD1-204ENST00000521439 KDM2AQ9Y2K7 1162 aa15.72■□□□□ 0.11
NUDCD1-204ENST00000521439 DPY19L2Q6NUT2 758 aa15.71■□□□□ 0.11
NUDCD1-204ENST00000521439 MS4A4AQ96JQ5 239 aa15.71■□□□□ 0.11
NUDCD1-204ENST00000521439 SCUBE2Q9NQ36 999 aa15.69■□□□□ 0.1
NUDCD1-204ENST00000521439 G3V3G9 751 aa15.67■□□□□ 0.1
NUDCD1-204ENST00000521439 RYDENQ9NUL5 291 aaKnown RBP15.67■□□□□ 0.1
NUDCD1-204ENST00000521439 BOLA1Q9Y3E2 137 aa15.65■□□□□ 0.1
NUDCD1-204ENST00000521439 OTUD5Q96G74 571 aa15.64■□□□□ 0.09
NUDCD1-204ENST00000521439 C3orf67Q6ZVT6 689 aa15.59■□□□□ 0.09
NUDCD1-204ENST00000521439 TMEM121BQ9BXQ6 578 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms