RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 ATMINO43313 823 aaPredicted RBP12.09□□□□□ -0.47
PCM1-214ENST00000521338 KIF12Q96FN5 646 aa12.04□□□□□ -0.48
PCM1-214ENST00000521338 POTEJP0CG39 1038 aa12.02□□□□□ -0.49
PCM1-214ENST00000521338 METRNQ9UJH8 293 aa12.02□□□□□ -0.49
PCM1-214ENST00000521338 MIER1Q8N108 512 aa12.01□□□□□ -0.49
PCM1-214ENST00000521338 C7P10643 843 aa12□□□□□ -0.49
PCM1-214ENST00000521338 RASEFQ8IZ41 740 aa12□□□□□ -0.49
PCM1-214ENST00000521338 SLC39A7Q92504 469 aa12□□□□□ -0.49
PCM1-214ENST00000521338 ATN1P54259 1190 aaPredicted RBP11.99□□□□□ -0.49
PCM1-214ENST00000521338 TRPC6Q9Y210 931 aa11.97□□□□□ -0.49
PCM1-214ENST00000521338 MAP3K13O43283 966 aa11.96□□□□□ -0.49
PCM1-214ENST00000521338 BMP2KQ9NSY1 1161 aaPredicted RBP11.94□□□□□ -0.5
PCM1-214ENST00000521338 PLEKHG5O94827 1062 aa11.93□□□□□ -0.5
PCM1-214ENST00000521338 POTEFA5A3E0 1075 aa11.92□□□□□ -0.5
PCM1-214ENST00000521338 TIE1P35590 1138 aa11.88□□□□□ -0.51
PCM1-214ENST00000521338 NUBP1P53384 320 aa11.88□□□□□ -0.51
PCM1-214ENST00000521338 PLCD3Q8N3E9 789 aa11.87□□□□□ -0.51
PCM1-214ENST00000521338 POTEMA6NI47 508 aa11.84□□□□□ -0.51
PCM1-214ENST00000521338 TTLL13PA6NNM8 815 aa11.83□□□□□ -0.52
PCM1-214ENST00000521338 MAMSTRQ6ZN01 415 aa11.83□□□□□ -0.52
PCM1-214ENST00000521338 PLSCR2Q9NRY7 297 aa11.82□□□□□ -0.52
PCM1-214ENST00000521338 FKBP8Q14318 412 aa11.81□□□□□ -0.52
PCM1-214ENST00000521338 SGIP1Q9BQI5 828 aa11.81□□□□□ -0.52
PCM1-214ENST00000521338 POTEGQ6S5H5 508 aa11.8□□□□□ -0.52
PCM1-214ENST00000521338 LCE2DQ5TA82 110 aaPredicted RBP11.79□□□□□ -0.52
PCM1-214ENST00000521338 COLQQ9Y215 455 aaPredicted RBP11.79□□□□□ -0.52
PCM1-214ENST00000521338 ZBTB47Q9UFB7 747 aaPredicted RBP11.78□□□□□ -0.52
PCM1-214ENST00000521338 PCDHB13Q9Y5F0 798 aa11.77□□□□□ -0.53
PCM1-214ENST00000521338 IFNL1Q8IU54 200 aa11.75□□□□□ -0.53
PCM1-214ENST00000521338 SCUBE2Q9NQ36 999 aa11.75□□□□□ -0.53
PCM1-214ENST00000521338 TRIM35Q9UPQ4 493 aa11.73□□□□□ -0.53
PCM1-214ENST00000521338 IER5LQ5T953 404 aa11.71□□□□□ -0.53
PCM1-214ENST00000521338 FAM212AQ96EL1 285 aa11.7□□□□□ -0.54
PCM1-214ENST00000521338 SEC24BO95487 1268 aa11.68□□□□□ -0.54
PCM1-214ENST00000521338 FAM163AQ96GL9 167 aaPredicted RBP11.67□□□□□ -0.54
PCM1-214ENST00000521338 TMEM106CQ9BVX2 250 aa11.64□□□□□ -0.55
PCM1-214ENST00000521338 PCDH10Q9P2E7 1040 aa11.64□□□□□ -0.55
PCM1-214ENST00000521338 IRX5P78411 483 aaPredicted RBP11.59□□□□□ -0.55
PCM1-214ENST00000521338 DCAF8Q5TAQ9 597 aa11.59□□□□□ -0.55
PCM1-214ENST00000521338 PYGBP11216 843 aa11.58□□□□□ -0.56
PCM1-214ENST00000521338 FBXO3Q9UK99 471 aa11.58□□□□□ -0.56
PCM1-214ENST00000521338 PCDHB8Q9UN66 801 aa11.54□□□□□ -0.56
PCM1-214ENST00000521338 PLCG2P16885 1265 aa11.52□□□□□ -0.57
PCM1-214ENST00000521338 SLAIN1Q8ND83 568 aa11.5□□□□□ -0.57
PCM1-214ENST00000521338 VASPP50552 380 aaPredicted RBP11.49□□□□□ -0.57
PCM1-214ENST00000521338 OCEL1Q9H607 264 aa11.49□□□□□ -0.57
PCM1-214ENST00000521338 ST18O60284 1047 aa11.45□□□□□ -0.58
PCM1-214ENST00000521338 CHRM1P11229 460 aaPredicted RBP11.43□□□□□ -0.58
PCM1-214ENST00000521338 GSE1Q14687 1217 aa11.43□□□□□ -0.58
PCM1-214ENST00000521338 KLHL34Q8N239 644 aa11.42□□□□□ -0.58
PCM1-214ENST00000521338 CDAN1Q8IWY9 1227 aa11.4□□□□□ -0.58
PCM1-214ENST00000521338 PDCD7Q8N8D1 485 aaKnown RBP11.4□□□□□ -0.58
PCM1-214ENST00000521338 ZNF467Q7Z7K2 595 aaPredicted RBP11.39□□□□□ -0.59
PCM1-214ENST00000521338 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.34□□□□□ -0.59
PCM1-214ENST00000521338 IFNLR1Q8IU57 520 aaPredicted RBP11.33□□□□□ -0.6
PCM1-214ENST00000521338 PSEN1P49768 467 aa11.32□□□□□ -0.6
PCM1-214ENST00000521338 ILDR1Q86SU0 546 aaPredicted RBP11.31□□□□□ -0.6
PCM1-214ENST00000521338 MKRN3Q13064 507 aaKnown RBP11.29□□□□□ -0.6
PCM1-214ENST00000521338 TMEM121BQ9BXQ6 578 aaPredicted RBP11.29□□□□□ -0.6
PCM1-214ENST00000521338 SNPHO15079 494 aa11.27□□□□□ -0.61
PCM1-214ENST00000521338 GOLGA2Q08379 1002 aa11.26□□□□□ -0.61
PCM1-214ENST00000521338 SPOCK2Q92563 424 aa11.26□□□□□ -0.61
PCM1-214ENST00000521338 L3MBTL3Q96JM7 780 aaPredicted RBP11.26□□□□□ -0.61
PCM1-214ENST00000521338 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.26□□□□□ -0.617e-11■■□□□ 14.5
PCM1-214ENST00000521338 PDAP1Q13442 181 aaKnown RBP11.24□□□□□ -0.61
PCM1-214ENST00000521338 MARVELD3Q96A59 401 aa11.23□□□□□ -0.61
PCM1-214ENST00000521338 DPY19L2Q6NUT2 758 aa11.22□□□□□ -0.61
PCM1-214ENST00000521338 C3orf67Q6ZVT6 689 aa11.21□□□□□ -0.61
PCM1-214ENST00000521338 CIZ1Q9ULV3 898 aaPredicted RBP11.19□□□□□ -0.62
PCM1-214ENST00000521338 CABP2Q9NPB3 220 aa11.17□□□□□ -0.62
PCM1-214ENST00000521338 SPNS2Q8IVW8 549 aa11.16□□□□□ -0.62
PCM1-214ENST00000521338 POTEB3A0JP26 581 aa11.14□□□□□ -0.63
PCM1-214ENST00000521338 POTEBQ6S5H4 581 aa11.14□□□□□ -0.63
PCM1-214ENST00000521338 MMRN1Q13201 1228 aa11.13□□□□□ -0.63
PCM1-214ENST00000521338 BOLA1Q9Y3E2 137 aa11.1□□□□□ -0.63
PCM1-214ENST00000521338 HOXB3P14651 431 aaPredicted RBP11.09□□□□□ -0.63
PCM1-214ENST00000521338 EMP3P54852 163 aa11.09□□□□□ -0.63
PCM1-214ENST00000521338 HS3ST6Q96QI5 342 aa11.06□□□□□ -0.64
PCM1-214ENST00000521338 KRTAP3-3Q9BYR6 98 aa11.06□□□□□ -0.64
PCM1-214ENST00000521338 KRTAP3-2Q9BYR7 98 aa11.06□□□□□ -0.64
PCM1-214ENST00000521338 EFCAB3Q8N7B9 438 aa11.05□□□□□ -0.64
PCM1-214ENST00000521338 TRIM41Q8WV44 630 aa11.05□□□□□ -0.64
PCM1-214ENST00000521338 FAM205CA6NFA0 338 aa11.04□□□□□ -0.64
PCM1-214ENST00000521338 RNF25Q96BH1 459 aaPredicted RBP11.01□□□□□ -0.65
PCM1-214ENST00000521338 G3V3G9 751 aa11□□□□□ -0.65
PCM1-214ENST00000521338 HOXB1P14653 301 aaPredicted RBP10.98□□□□□ -0.65
PCM1-214ENST00000521338 TMEM92Q6UXU6 159 aa10.97□□□□□ -0.65
PCM1-214ENST00000521338 MS4A4AQ96JQ5 239 aa10.95□□□□□ -0.66
PCM1-214ENST00000521338 RIOK3O14730 519 aaKnown RBP10.94□□□□□ -0.66
PCM1-214ENST00000521338 MICALL2Q8IY33 904 aa10.94□□□□□ -0.66
PCM1-214ENST00000521338 SOX12O15370 315 aa10.93□□□□□ -0.66
PCM1-214ENST00000521338 DOK7Q18PE1 504 aa10.93□□□□□ -0.66
PCM1-214ENST00000521338 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.92□□□□□ -0.66
PCM1-214ENST00000521338 ZFP91Q96JP5 570 aaPredicted RBP10.92□□□□□ -0.66
PCM1-214ENST00000521338 ZNF710Q8N1W2 664 aa10.91□□□□□ -0.66
PCM1-214ENST00000521338 VGFO15240 615 aaPredicted RBP10.89□□□□□ -0.67
PCM1-214ENST00000521338 PHF8Q9UPP1 1060 aa10.88□□□□□ -0.67
PCM1-214ENST00000521338 ERBB3P21860 1342 aa10.85□□□□□ -0.67
PCM1-214ENST00000521338 GPR153Q6NV75 609 aa10.84□□□□□ -0.67
PCM1-214ENST00000521338 ZSWIM6Q9HCJ5 1215 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 873.8 ms