RNA–Protein interactions for RNA: ENST00000520858.5

PSD3-213, Transcript of pleckstrin and Sec7 domain containing 3, humanhuman

TSL 2

Gene PSD3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSD3-213ENST00000520858 ATMINO43313 823 aaPredicted RBP16.24■□□□□ 0.19
PSD3-213ENST00000520858 METRNQ9UJH8 293 aa16.24■□□□□ 0.19
PSD3-213ENST00000520858 SLC39A7Q92504 469 aa16.15■□□□□ 0.18
PSD3-213ENST00000520858 C7P10643 843 aa16.14■□□□□ 0.17
PSD3-213ENST00000520858 LCE2DQ5TA82 110 aaPredicted RBP16.12■□□□□ 0.17
PSD3-213ENST00000520858 ATN1P54259 1190 aaPredicted RBP16.08■□□□□ 0.16
PSD3-213ENST00000520858 TSPYL2Q9H2G4 693 aaPredicted RBP16.08■□□□□ 0.16
PSD3-213ENST00000520858 CCDC61Q9Y6R9 512 aa16.07■□□□□ 0.16
PSD3-213ENST00000520858 EHMT2Q96KQ7 1210 aa16.04■□□□□ 0.16
PSD3-213ENST00000520858 POTEFA5A3E0 1075 aa16.03■□□□□ 0.16
PSD3-213ENST00000520858 MAMSTRQ6ZN01 415 aa16.01■□□□□ 0.15
PSD3-213ENST00000520858 PROM2Q8N271 834 aa16.01■□□□□ 0.15
PSD3-213ENST00000520858 TRPC6Q9Y210 931 aa16.01■□□□□ 0.15
PSD3-213ENST00000520858 PCDH10Q9P2E7 1040 aa16■□□□□ 0.15
PSD3-213ENST00000520858 KIF12Q96FN5 646 aa15.99■□□□□ 0.15
PSD3-213ENST00000520858 BMP2KQ9NSY1 1161 aaPredicted RBP15.96■□□□□ 0.15
PSD3-213ENST00000520858 FAM163AQ96GL9 167 aaPredicted RBP15.94■□□□□ 0.14
PSD3-213ENST00000520858 SCUBE2Q9NQ36 999 aa15.91■□□□□ 0.14
PSD3-213ENST00000520858 MAP3K13O43283 966 aa15.88■□□□□ 0.13
PSD3-213ENST00000520858 RASEFQ8IZ41 740 aa15.83■□□□□ 0.12
PSD3-213ENST00000520858 TIE1P35590 1138 aa15.82■□□□□ 0.12
PSD3-213ENST00000520858 COLQQ9Y215 455 aaPredicted RBP15.82■□□□□ 0.12
PSD3-213ENST00000520858 TTLL13PA6NNM8 815 aa15.77■□□□□ 0.12
PSD3-213ENST00000520858 MIER1Q8N108 512 aa15.7■□□□□ 0.1
PSD3-213ENST00000520858 SEC24BO95487 1268 aa15.67■□□□□ 0.1
PSD3-213ENST00000520858 TRIM35Q9UPQ4 493 aa15.66■□□□□ 0.1
PSD3-213ENST00000520858 CDAN1Q8IWY9 1227 aa15.63■□□□□ 0.09
PSD3-213ENST00000520858 PLEKHG5O94827 1062 aa15.6■□□□□ 0.09
PSD3-213ENST00000520858 IER5LQ5T953 404 aa15.6■□□□□ 0.09
PSD3-213ENST00000520858 PCDHB13Q9Y5F0 798 aa15.59■□□□□ 0.09
PSD3-213ENST00000520858 SGIP1Q9BQI5 828 aa15.58■□□□□ 0.08
PSD3-213ENST00000520858 NUBP1P53384 320 aa15.54■□□□□ 0.08
PSD3-213ENST00000520858 IFNL1Q8IU54 200 aa15.54■□□□□ 0.08
PSD3-213ENST00000520858 ST18O60284 1047 aa15.53■□□□□ 0.08
PSD3-213ENST00000520858 SLAIN1Q8ND83 568 aa15.52■□□□□ 0.08
PSD3-213ENST00000520858 PLCD3Q8N3E9 789 aa15.48■□□□□ 0.07
PSD3-213ENST00000520858 TMEM106CQ9BVX2 250 aa15.46■□□□□ 0.07
PSD3-213ENST00000520858 IRX5P78411 483 aaPredicted RBP15.43■□□□□ 0.06
PSD3-213ENST00000520858 PLCG2P16885 1265 aa15.39■□□□□ 0.05
PSD3-213ENST00000520858 ZBTB47Q9UFB7 747 aaPredicted RBP15.34■□□□□ 0.05
PSD3-213ENST00000520858 FAM212AQ96EL1 285 aa15.33■□□□□ 0.04
PSD3-213ENST00000520858 MMRN1Q13201 1228 aa15.29■□□□□ 0.04
PSD3-213ENST00000520858 SPNS2Q8IVW8 549 aa15.28■□□□□ 0.04
PSD3-213ENST00000520858 OCEL1Q9H607 264 aa15.27■□□□□ 0.04
PSD3-213ENST00000520858 TMEM121BQ9BXQ6 578 aaPredicted RBP15.24■□□□□ 0.03
PSD3-213ENST00000520858 PYGBP11216 843 aa15.23■□□□□ 0.03
PSD3-213ENST00000520858 MARVELD3Q96A59 401 aa15.22■□□□□ 0.03
PSD3-213ENST00000520858 PCDHB8Q9UN66 801 aa15.2■□□□□ 0.02
PSD3-213ENST00000520858 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.18■□□□□ 0.02
PSD3-213ENST00000520858 DCAF8Q5TAQ9 597 aa15.16■□□□□ 0.02
PSD3-213ENST00000520858 SNPHO15079 494 aa15.14■□□□□ 0.01
PSD3-213ENST00000520858 PDCD7Q8N8D1 485 aaKnown RBP15.13■□□□□ 0.01
PSD3-213ENST00000520858 POTEB3A0JP26 581 aa15.06■□□□□ 0
PSD3-213ENST00000520858 POTEBQ6S5H4 581 aa15.06■□□□□ 0
PSD3-213ENST00000520858 FKBP8Q14318 412 aa15.05■□□□□ -0
PSD3-213ENST00000520858 KRTAP3-3Q9BYR6 98 aa15.02■□□□□ -0
PSD3-213ENST00000520858 KRTAP3-2Q9BYR7 98 aa15.02■□□□□ -0
PSD3-213ENST00000520858 EMP3P54852 163 aa15□□□□□ -0.01
PSD3-213ENST00000520858 C3orf67Q6ZVT6 689 aa14.98□□□□□ -0.01
PSD3-213ENST00000520858 HS3ST6Q96QI5 342 aa14.96□□□□□ -0.01
PSD3-213ENST00000520858 L3MBTL3Q96JM7 780 aaPredicted RBP14.93□□□□□ -0.02
PSD3-213ENST00000520858 FAM205CA6NFA0 338 aa14.92□□□□□ -0.02
PSD3-213ENST00000520858 MKRN3Q13064 507 aaKnown RBP14.92□□□□□ -0.02
PSD3-213ENST00000520858 ZNF467Q7Z7K2 595 aaPredicted RBP14.91□□□□□ -0.02
PSD3-213ENST00000520858 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.9□□□□□ -0.021e-6■■■■□ 21.7
PSD3-213ENST00000520858 GOLGA2Q08379 1002 aa14.88□□□□□ -0.03
PSD3-213ENST00000520858 ILDR1Q86SU0 546 aaPredicted RBP14.88□□□□□ -0.03
PSD3-213ENST00000520858 PSEN1P49768 467 aa14.86□□□□□ -0.03
PSD3-213ENST00000520858 DPY19L2Q6NUT2 758 aa14.86□□□□□ -0.03
PSD3-213ENST00000520858 CHRM1P11229 460 aaPredicted RBP14.84□□□□□ -0.03
PSD3-213ENST00000520858 GSE1Q14687 1217 aa14.84□□□□□ -0.03
PSD3-213ENST00000520858 HOXB3P14651 431 aaPredicted RBP14.8□□□□□ -0.04
PSD3-213ENST00000520858 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
PSD3-213ENST00000520858 KLHL34Q8N239 644 aa14.77□□□□□ -0.05
PSD3-213ENST00000520858 VASPP50552 380 aaPredicted RBP14.74□□□□□ -0.05
PSD3-213ENST00000520858 PDAP1Q13442 181 aaKnown RBP14.7□□□□□ -0.06
PSD3-213ENST00000520858 BOLA1Q9Y3E2 137 aa14.7□□□□□ -0.06
PSD3-213ENST00000520858 CABP2Q9NPB3 220 aa14.69□□□□□ -0.06
PSD3-213ENST00000520858 HOXB1P14653 301 aaPredicted RBP14.68□□□□□ -0.06
PSD3-213ENST00000520858 ZNF710Q8N1W2 664 aa14.59□□□□□ -0.07
PSD3-213ENST00000520858 ERBB3P21860 1342 aa14.59□□□□□ -0.07
PSD3-213ENST00000520858 G3V3G9 751 aa14.58□□□□□ -0.08
PSD3-213ENST00000520858 DOK7Q18PE1 504 aa14.56□□□□□ -0.08
PSD3-213ENST00000520858 RNF166Q96A37 237 aaPredicted RBP14.55□□□□□ -0.08
PSD3-213ENST00000520858 VARS2Q5ST30 1063 aaKnown RBP14.52□□□□□ -0.09
PSD3-213ENST00000520858 TMEM92Q6UXU6 159 aa14.51□□□□□ -0.09
PSD3-213ENST00000520858 CIZ1Q9ULV3 898 aaPredicted RBP14.5□□□□□ -0.09
PSD3-213ENST00000520858 IFNLR1Q8IU57 520 aaPredicted RBP14.49□□□□□ -0.09
PSD3-213ENST00000520858 EFCAB3Q8N7B9 438 aa14.48□□□□□ -0.09
PSD3-213ENST00000520858 SPOCK2Q92563 424 aa14.46□□□□□ -0.09
PSD3-213ENST00000520858 MYT1LQ9UL68 1186 aa14.45□□□□□ -0.1
PSD3-213ENST00000520858 RIMBP2O15034 1052 aa14.42□□□□□ -0.1
PSD3-213ENST00000520858 ZNF687Q8N1G0 1237 aa14.42□□□□□ -0.1
PSD3-213ENST00000520858 GPR153Q6NV75 609 aa14.41□□□□□ -0.1
PSD3-213ENST00000520858 MICALL2Q8IY33 904 aa14.41□□□□□ -0.1
PSD3-213ENST00000520858 ZSWIM6Q9HCJ5 1215 aa14.38□□□□□ -0.11
PSD3-213ENST00000520858 MS4A4AQ96JQ5 239 aa14.34□□□□□ -0.11
PSD3-213ENST00000520858 ARSIQ5FYB1 569 aa14.28□□□□□ -0.12
PSD3-213ENST00000520858 KHSRPQ92945 711 aaKnown RBP eCLIP14.26□□□□□ -0.13
PSD3-213ENST00000520858 PTGER2P43116 358 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms