RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 RGL2O15211 777 aa14.78□□□□□ -0.04
SHPRH-208ENST00000520752 CHRM1P11229 460 aaPredicted RBP14.76□□□□□ -0.05
SHPRH-208ENST00000520752 DCAF8L2P0C7V8 631 aa14.75□□□□□ -0.05
SHPRH-208ENST00000520752 TSPYL2Q9H2G4 693 aaPredicted RBP14.68□□□□□ -0.06
SHPRH-208ENST00000520752 RNF25Q96BH1 459 aaPredicted RBP14.66□□□□□ -0.06
SHPRH-208ENST00000520752 PYGBP11216 843 aa14.62□□□□□ -0.07
SHPRH-208ENST00000520752 CCDC61Q9Y6R9 512 aa14.62□□□□□ -0.07
SHPRH-208ENST00000520752 TTBK1Q5TCY1 1321 aaPredicted RBP14.62□□□□□ -0.07
SHPRH-208ENST00000520752 RIOK3O14730 519 aaKnown RBP14.61□□□□□ -0.07
SHPRH-208ENST00000520752 PAK3O75914 559 aaPredicted RBP14.61□□□□□ -0.07
SHPRH-208ENST00000520752 TAOK2Q9UL54 1235 aa14.58□□□□□ -0.08
SHPRH-208ENST00000520752 BBXQ8WY36 941 aaPredicted RBP14.54□□□□□ -0.08
SHPRH-208ENST00000520752 CD44P16070 742 aaKnown RBP14.53□□□□□ -0.08
SHPRH-208ENST00000520752 VGFO15240 615 aaPredicted RBP14.52□□□□□ -0.09
SHPRH-208ENST00000520752 SLC24A1O60721 1099 aa14.52□□□□□ -0.09
SHPRH-208ENST00000520752 CHGAP10645 457 aaKnown RBP14.52□□□□□ -0.09
SHPRH-208ENST00000520752 SGIP1Q9BQI5 828 aa14.51□□□□□ -0.09
SHPRH-208ENST00000520752 C19orf67A6NJJ6 358 aa14.5□□□□□ -0.09
SHPRH-208ENST00000520752 HS6ST3Q8IZP7 471 aa14.5□□□□□ -0.09
SHPRH-208ENST00000520752 ZRANB1Q9UGI0 708 aa14.5□□□□□ -0.09
SHPRH-208ENST00000520752 ZNF467Q7Z7K2 595 aaPredicted RBP14.49□□□□□ -0.09
SHPRH-208ENST00000520752 PLCB2Q00722 1185 aa14.47□□□□□ -0.09
SHPRH-208ENST00000520752 KIF12Q96FN5 646 aa14.46□□□□□ -0.09
SHPRH-208ENST00000520752 DNAJC5Q9H3Z4 198 aa14.45□□□□□ -0.1
SHPRH-208ENST00000520752 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.45□□□□□ -0.1
SHPRH-208ENST00000520752 ZNF579Q8NAF0 562 aaKnown RBP14.44□□□□□ -0.1
SHPRH-208ENST00000520752 MAP3K13O43283 966 aa14.41□□□□□ -0.1
SHPRH-208ENST00000520752 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.4□□□□□ -0.1
SHPRH-208ENST00000520752 ZFP91Q96JP5 570 aaPredicted RBP14.4□□□□□ -0.1
SHPRH-208ENST00000520752 PCDHB8Q9UN66 801 aa14.4□□□□□ -0.1
SHPRH-208ENST00000520752 PCDHB13Q9Y5F0 798 aa14.4□□□□□ -0.1
SHPRH-208ENST00000520752 STK25O00506 426 aa14.39□□□□□ -0.11
SHPRH-208ENST00000520752 HRCP23327 699 aa14.37□□□□□ -0.11
SHPRH-208ENST00000520752 PDAP1Q13442 181 aaKnown RBP14.37□□□□□ -0.11
SHPRH-208ENST00000520752 PHF12Q96QT6 1004 aa14.37□□□□□ -0.11
SHPRH-208ENST00000520752 IFNL1Q8IU54 200 aa14.36□□□□□ -0.11
SHPRH-208ENST00000520752 BCL11BQ9C0K0 894 aaPredicted RBP14.34□□□□□ -0.11
SHPRH-208ENST00000520752 HAX1O00165 279 aa14.33□□□□□ -0.12
SHPRH-208ENST00000520752 STK24Q9Y6E0 443 aa14.32□□□□□ -0.12
SHPRH-208ENST00000520752 PSEN1P49768 467 aa14.31□□□□□ -0.12
SHPRH-208ENST00000520752 SPRYD3Q8NCJ5 442 aa14.31□□□□□ -0.12
SHPRH-208ENST00000520752 PAXIP1Q6ZW49 1069 aaPredicted RBP14.3□□□□□ -0.12
SHPRH-208ENST00000520752 NKX1-1Q15270 411 aaPredicted RBP14.27□□□□□ -0.13
SHPRH-208ENST00000520752 CFAP44Q96MT7 982 aa14.26□□□□□ -0.13
SHPRH-208ENST00000520752 EVX2Q03828 476 aa14.25□□□□□ -0.13
SHPRH-208ENST00000520752 CLCN6P51797 869 aa14.24□□□□□ -0.13
SHPRH-208ENST00000520752 POTEHQ6S545 545 aa14.24□□□□□ -0.13
SHPRH-208ENST00000520752 MS4A3Q96HJ5 214 aa14.22□□□□□ -0.13
SHPRH-208ENST00000520752 HAP1P54257 671 aaPredicted RBP14.2□□□□□ -0.14
SHPRH-208ENST00000520752 GTPBP6O43824 516 aaPredicted RBP14.18□□□□□ -0.14
SHPRH-208ENST00000520752 RYDENQ9NUL5 291 aaKnown RBP14.17□□□□□ -0.14
SHPRH-208ENST00000520752 TRPC6Q9Y210 931 aa14.13□□□□□ -0.15
SHPRH-208ENST00000520752 TIE1P35590 1138 aa14.11□□□□□ -0.15
SHPRH-208ENST00000520752 TMEM106CQ9BVX2 250 aa14.11□□□□□ -0.15
SHPRH-208ENST00000520752 GALR2O43603 387 aaPredicted RBP14.1□□□□□ -0.15
SHPRH-208ENST00000520752 CABP2Q9NPB3 220 aa14.1□□□□□ -0.15
SHPRH-208ENST00000520752 VSIG10Q8N0Z9 540 aa14.08□□□□□ -0.16
SHPRH-208ENST00000520752 SOX12O15370 315 aa14.07□□□□□ -0.16
SHPRH-208ENST00000520752 EFCAB3Q8N7B9 438 aa14.07□□□□□ -0.16
SHPRH-208ENST00000520752 TSHZ2Q9NRE2 1034 aa14.06□□□□□ -0.16
SHPRH-208ENST00000520752 MFRPQ9BY79 579 aa14.05□□□□□ -0.16
SHPRH-208ENST00000520752 TTLL13PA6NNM8 815 aa14.04□□□□□ -0.16
SHPRH-208ENST00000520752 BMP2KQ9NSY1 1161 aaPredicted RBP14.03□□□□□ -0.16
SHPRH-208ENST00000520752 GABBR2O75899 941 aa14.01□□□□□ -0.17
SHPRH-208ENST00000520752 NLRP6P59044 892 aa14□□□□□ -0.17
SHPRH-208ENST00000520752 GOLGA2Q08379 1002 aa14□□□□□ -0.17
SHPRH-208ENST00000520752 FBXO22Q8NEZ5 403 aa13.99□□□□□ -0.17
SHPRH-208ENST00000520752 PHF8Q9UPP1 1060 aa13.97□□□□□ -0.17
SHPRH-208ENST00000520752 KDM2AQ9Y2K7 1162 aa13.96□□□□□ -0.17
SHPRH-208ENST00000520752 MKRN3Q13064 507 aaKnown RBP13.95□□□□□ -0.18
SHPRH-208ENST00000520752 ASTLQ6HA08 431 aaPredicted RBP13.94□□□□□ -0.18
SHPRH-208ENST00000520752 TRIM35Q9UPQ4 493 aa13.93□□□□□ -0.18
SHPRH-208ENST00000520752 ATMINO43313 823 aaPredicted RBP13.92□□□□□ -0.18
SHPRH-208ENST00000520752 ATN1P54259 1190 aaPredicted RBP13.9□□□□□ -0.18
SHPRH-208ENST00000520752 ILDR1Q86SU0 546 aaPredicted RBP13.9□□□□□ -0.18
SHPRH-208ENST00000520752 MS4A4AQ96JQ5 239 aa13.88□□□□□ -0.19
SHPRH-208ENST00000520752 PPP1R37O75864 691 aa13.87□□□□□ -0.19
SHPRH-208ENST00000520752 SP7Q8TDD2 431 aaPredicted RBP13.86□□□□□ -0.19
SHPRH-208ENST00000520752 IER5LQ5T953 404 aa13.84□□□□□ -0.19
SHPRH-208ENST00000520752 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.84□□□□□ -0.192e-7■■■■□ 22.1
SHPRH-208ENST00000520752 DCBLD2Q96PD2 775 aa13.83□□□□□ -0.2
SHPRH-208ENST00000520752 NISCHQ9Y2I1 1504 aa13.83□□□□□ -0.2
SHPRH-208ENST00000520752 IRX5P78411 483 aaPredicted RBP13.78□□□□□ -0.2
SHPRH-208ENST00000520752 CADPS2Q86UW7 1296 aa13.77□□□□□ -0.21
SHPRH-208ENST00000520752 PDCD7Q8N8D1 485 aaKnown RBP13.75□□□□□ -0.21
SHPRH-208ENST00000520752 OCEL1Q9H607 264 aa13.75□□□□□ -0.21
SHPRH-208ENST00000520752 POTEIP0CG38 1075 aa13.71□□□□□ -0.21
SHPRH-208ENST00000520752 DPY19L2Q6NUT2 758 aa13.7□□□□□ -0.22
SHPRH-208ENST00000520752 SLC39A7Q92504 469 aa13.7□□□□□ -0.22
SHPRH-208ENST00000520752 C7P10643 843 aa13.68□□□□□ -0.22
SHPRH-208ENST00000520752 PLCG2P16885 1265 aa13.67□□□□□ -0.22
SHPRH-208ENST00000520752 ERICH6Q7L0X2 663 aa13.67□□□□□ -0.22
SHPRH-208ENST00000520752 SEC24BO95487 1268 aa13.64□□□□□ -0.23
SHPRH-208ENST00000520752 WDR70Q9NW82 654 aa13.63□□□□□ -0.23
SHPRH-208ENST00000520752 COLQQ9Y215 455 aaPredicted RBP13.63□□□□□ -0.23
SHPRH-208ENST00000520752 BCANQ96GW7 911 aa13.62□□□□□ -0.23
SHPRH-208ENST00000520752 TMEM121BQ9BXQ6 578 aaPredicted RBP13.62□□□□□ -0.23
SHPRH-208ENST00000520752 NCKAP5LQ9HCH0 1330 aa13.62□□□□□ -0.23
SHPRH-208ENST00000520752 PDE4AP27815 886 aa13.61□□□□□ -0.23
SHPRH-208ENST00000520752 MICALL2Q8IY33 904 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms