RNA–Protein interactions for RNA: ENST00000520619.1

SNHG6-202, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 3 BASIC

Gene SNHG6, Length 479 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-202ENST00000520619 GSE1Q14687 1217 aa11.43□□□□□ -0.58
SNHG6-202ENST00000520619 ZNF579Q8NAF0 562 aaKnown RBP11.42□□□□□ -0.58
SNHG6-202ENST00000520619 CIZ1Q9ULV3 898 aaPredicted RBP11.42□□□□□ -0.58
SNHG6-202ENST00000520619 PHF12Q96QT6 1004 aa11.39□□□□□ -0.59
SNHG6-202ENST00000520619 SP7Q8TDD2 431 aaPredicted RBP11.38□□□□□ -0.59
SNHG6-202ENST00000520619 PYGBP11216 843 aa11.33□□□□□ -0.6
SNHG6-202ENST00000520619 KIF12Q96FN5 646 aa11.33□□□□□ -0.6
SNHG6-202ENST00000520619 PKD2Q13563 968 aa11.31□□□□□ -0.6
SNHG6-202ENST00000520619 GABBR2O75899 941 aa11.3□□□□□ -0.6
SNHG6-202ENST00000520619 CLCN6P51797 869 aa11.3□□□□□ -0.6
SNHG6-202ENST00000520619 MAP3K13O43283 966 aa11.29□□□□□ -0.6
SNHG6-202ENST00000520619 CHRM1P11229 460 aaPredicted RBP11.29□□□□□ -0.6
SNHG6-202ENST00000520619 TRIM41Q8WV44 630 aa11.28□□□□□ -0.6
SNHG6-202ENST00000520619 GALR2O43603 387 aaPredicted RBP11.25□□□□□ -0.61
SNHG6-202ENST00000520619 MS4A3Q96HJ5 214 aa11.25□□□□□ -0.61
SNHG6-202ENST00000520619 SGIP1Q9BQI5 828 aa11.25□□□□□ -0.61
SNHG6-202ENST00000520619 PCDHB13Q9Y5F0 798 aa11.25□□□□□ -0.61
SNHG6-202ENST00000520619 ECM2O94769 699 aaPredicted RBP11.23□□□□□ -0.61
SNHG6-202ENST00000520619 AMER1Q5JTC6 1135 aaPredicted RBP11.22□□□□□ -0.61
SNHG6-202ENST00000520619 IFNL1Q8IU54 200 aa11.21□□□□□ -0.61
SNHG6-202ENST00000520619 RTN4Q9NQC3 1192 aaKnown RBP11.2□□□□□ -0.62
SNHG6-202ENST00000520619 PCDHB8Q9UN66 801 aa11.19□□□□□ -0.62
SNHG6-202ENST00000520619 ZNF467Q7Z7K2 595 aaPredicted RBP11.17□□□□□ -0.62
SNHG6-202ENST00000520619 RNF25Q96BH1 459 aaPredicted RBP11.17□□□□□ -0.62
SNHG6-202ENST00000520619 TRPC6Q9Y210 931 aa11.15□□□□□ -0.62
SNHG6-202ENST00000520619 RGL2O15211 777 aa11.14□□□□□ -0.63
SNHG6-202ENST00000520619 RIOK3O14730 519 aaKnown RBP11.12□□□□□ -0.63
SNHG6-202ENST00000520619 DCBLD2Q96PD2 775 aa11.1□□□□□ -0.63
SNHG6-202ENST00000520619 POTEIP0CG38 1075 aa11.08□□□□□ -0.64
SNHG6-202ENST00000520619 TIE1P35590 1138 aa11.08□□□□□ -0.64
SNHG6-202ENST00000520619 BMP2KQ9NSY1 1161 aaPredicted RBP11.08□□□□□ -0.64
SNHG6-202ENST00000520619 PDAP1Q13442 181 aaKnown RBP11.07□□□□□ -0.64
SNHG6-202ENST00000520619 PSEN1P49768 467 aa11.06□□□□□ -0.64
SNHG6-202ENST00000520619 TTLL13PA6NNM8 815 aa11.05□□□□□ -0.64
SNHG6-202ENST00000520619 VGFO15240 615 aaPredicted RBP11.05□□□□□ -0.64
SNHG6-202ENST00000520619 ATMINO43313 823 aaPredicted RBP11.05□□□□□ -0.64
SNHG6-202ENST00000520619 ASTLQ6HA08 431 aaPredicted RBP11.05□□□□□ -0.64
SNHG6-202ENST00000520619 TMEM106CQ9BVX2 250 aa11.05□□□□□ -0.64
SNHG6-202ENST00000520619 ATN1P54259 1190 aaPredicted RBP11.02□□□□□ -0.65
SNHG6-202ENST00000520619 TAOK2Q9UL54 1235 aa11.02□□□□□ -0.65
SNHG6-202ENST00000520619 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.01□□□□□ -0.65
SNHG6-202ENST00000520619 ZFP91Q96JP5 570 aaPredicted RBP11.01□□□□□ -0.65
SNHG6-202ENST00000520619 PELP1Q8IZL8 1130 aaKnown RBP10.99□□□□□ -0.65
SNHG6-202ENST00000520619 TRIM35Q9UPQ4 493 aa10.98□□□□□ -0.65
SNHG6-202ENST00000520619 STK25O00506 426 aa10.94□□□□□ -0.66
SNHG6-202ENST00000520619 DCAF8L2P0C7V8 631 aa10.94□□□□□ -0.66
SNHG6-202ENST00000520619 BCL11BQ9C0K0 894 aaPredicted RBP10.94□□□□□ -0.66
SNHG6-202ENST00000520619 CABP2Q9NPB3 220 aa10.93□□□□□ -0.66
SNHG6-202ENST00000520619 STK24Q9Y6E0 443 aa10.92□□□□□ -0.66
SNHG6-202ENST00000520619 CHGAP10645 457 aaKnown RBP10.9□□□□□ -0.66
SNHG6-202ENST00000520619 GOLGA2Q08379 1002 aa10.9□□□□□ -0.66
SNHG6-202ENST00000520619 HS6ST3Q8IZP7 471 aa10.9□□□□□ -0.66
SNHG6-202ENST00000520619 SLC39A7Q92504 469 aa10.9□□□□□ -0.66
SNHG6-202ENST00000520619 C7P10643 843 aa10.88□□□□□ -0.67
SNHG6-202ENST00000520619 METRNQ9UJH8 293 aa10.88□□□□□ -0.67
SNHG6-202ENST00000520619 MKRN3Q13064 507 aaKnown RBP10.87□□□□□ -0.67
SNHG6-202ENST00000520619 IER5LQ5T953 404 aa10.87□□□□□ -0.67
SNHG6-202ENST00000520619 EFCAB3Q8N7B9 438 aa10.86□□□□□ -0.67
SNHG6-202ENST00000520619 IRX5P78411 483 aaPredicted RBP10.82□□□□□ -0.68
SNHG6-202ENST00000520619 POTEFA5A3E0 1075 aa10.81□□□□□ -0.68
SNHG6-202ENST00000520619 COLQQ9Y215 455 aaPredicted RBP10.81□□□□□ -0.68
SNHG6-202ENST00000520619 SOX12O15370 315 aa10.8□□□□□ -0.68
SNHG6-202ENST00000520619 SEC24BO95487 1268 aa10.8□□□□□ -0.68
SNHG6-202ENST00000520619 DNAJC5Q9H3Z4 198 aa10.8□□□□□ -0.68
SNHG6-202ENST00000520619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.8□□□□□ -0.685e-10■□□□□ 10.5
SNHG6-202ENST00000520619 ILDR1Q86SU0 546 aaPredicted RBP10.79□□□□□ -0.68
SNHG6-202ENST00000520619 OCEL1Q9H607 264 aa10.79□□□□□ -0.68
SNHG6-202ENST00000520619 PLCG2P16885 1265 aa10.78□□□□□ -0.68
SNHG6-202ENST00000520619 PHF8Q9UPP1 1060 aa10.77□□□□□ -0.69
SNHG6-202ENST00000520619 PDCD7Q8N8D1 485 aaKnown RBP10.76□□□□□ -0.69
SNHG6-202ENST00000520619 MFRPQ9BY79 579 aa10.76□□□□□ -0.69
SNHG6-202ENST00000520619 NKX1-1Q15270 411 aaPredicted RBP10.75□□□□□ -0.69
SNHG6-202ENST00000520619 POTEB2H3BUK9 544 aa10.73□□□□□ -0.69
SNHG6-202ENST00000520619 FBXO22Q8NEZ5 403 aa10.73□□□□□ -0.69
SNHG6-202ENST00000520619 NLRP6P59044 892 aa10.72□□□□□ -0.69
SNHG6-202ENST00000520619 BBXQ8WY36 941 aaPredicted RBP10.71□□□□□ -0.69
SNHG6-202ENST00000520619 MS4A4AQ96JQ5 239 aa10.71□□□□□ -0.69
SNHG6-202ENST00000520619 DPY19L2Q6NUT2 758 aa10.7□□□□□ -0.7
SNHG6-202ENST00000520619 LHX8Q68G74 356 aa10.68□□□□□ -0.7
SNHG6-202ENST00000520619 POTEJP0CG39 1038 aa10.67□□□□□ -0.7
SNHG6-202ENST00000520619 GTPBP6O43824 516 aaPredicted RBP10.64□□□□□ -0.71
SNHG6-202ENST00000520619 L3MBTL3Q96JM7 780 aaPredicted RBP10.64□□□□□ -0.71
SNHG6-202ENST00000520619 RYDENQ9NUL5 291 aaKnown RBP10.63□□□□□ -0.71
SNHG6-202ENST00000520619 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.62□□□□□ -0.71
SNHG6-202ENST00000520619 BOLA1Q9Y3E2 137 aa10.62□□□□□ -0.71
SNHG6-202ENST00000520619 PPP1R37O75864 691 aa10.61□□□□□ -0.71
SNHG6-202ENST00000520619 TMEM121BQ9BXQ6 578 aaPredicted RBP10.59□□□□□ -0.71
SNHG6-202ENST00000520619 G3V3G9 751 aa10.58□□□□□ -0.72
SNHG6-202ENST00000520619 MAMSTRQ6ZN01 415 aa10.57□□□□□ -0.72
SNHG6-202ENST00000520619 MICALL2Q8IY33 904 aa10.57□□□□□ -0.72
SNHG6-202ENST00000520619 SPRYD3Q8NCJ5 442 aa10.57□□□□□ -0.72
SNHG6-202ENST00000520619 OTUD5Q96G74 571 aa10.56□□□□□ -0.72
SNHG6-202ENST00000520619 SCUBE2Q9NQ36 999 aa10.56□□□□□ -0.72
SNHG6-202ENST00000520619 PAXIP1Q6ZW49 1069 aaPredicted RBP10.54□□□□□ -0.72
SNHG6-202ENST00000520619 C3orf67Q6ZVT6 689 aa10.53□□□□□ -0.72
SNHG6-202ENST00000520619 CFAP44Q96MT7 982 aa10.53□□□□□ -0.72
SNHG6-202ENST00000520619 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.51□□□□□ -0.73
SNHG6-202ENST00000520619 SLAIN1Q8ND83 568 aa10.46□□□□□ -0.73
SNHG6-202ENST00000520619 PLCB2Q00722 1185 aa10.45□□□□□ -0.74
SNHG6-202ENST00000520619 TMEM92Q6UXU6 159 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 313.3 ms