RNA–Protein interactions for RNA: ENST00000520580.5

SREK1-208, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 2,369 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-208ENST00000520580 GTPBP6O43824 516 aaPredicted RBP7.01□□□□□ -1.29
SREK1-208ENST00000520580 SSUH2Q9Y2M2 353 aa7.01□□□□□ -1.29
SREK1-208ENST00000520580 ZBTB47Q9UFB7 747 aaPredicted RBP7□□□□□ -1.29
SREK1-208ENST00000520580 SPDYE2BA6NHP3 402 aa6.98□□□□□ -1.29
SREK1-208ENST00000520580 SPDYE6P0CI01 402 aa6.98□□□□□ -1.29
SREK1-208ENST00000520580 SPDYE2Q495Y8 402 aa6.98□□□□□ -1.29
SREK1-208ENST00000520580 RNF39Q9H2S5 420 aa6.98□□□□□ -1.29
SREK1-208ENST00000520580 STK25O00506 426 aa6.97□□□□□ -1.29
SREK1-208ENST00000520580 ERICH6Q7L0X2 663 aa6.97□□□□□ -1.29
SREK1-208ENST00000520580 TRIM41Q8WV44 630 aa6.97□□□□□ -1.29
SREK1-208ENST00000520580 HOMEZQ8IX15 550 aa6.96□□□□□ -1.29
SREK1-208ENST00000520580 RIOK3O14730 519 aaKnown RBP6.94□□□□□ -1.3
SREK1-208ENST00000520580 PLSCR2Q9NRY7 297 aa6.94□□□□□ -1.3
SREK1-208ENST00000520580 GSE1Q14687 1217 aa6.92□□□□□ -1.3
SREK1-208ENST00000520580 DCAF8Q5TAQ9 597 aa6.92□□□□□ -1.3
SREK1-208ENST00000520580 SUPT5HO00267 1087 aaKnown RBP6.89□□□□□ -1.31
SREK1-208ENST00000520580 STK24Q9Y6E0 443 aa6.89□□□□□ -1.31
SREK1-208ENST00000520580 C1QBPQ07021 282 aaKnown RBP6.89□□□□□ -1.31
SREK1-208ENST00000520580 LMOD2Q6P5Q4 547 aa6.89□□□□□ -1.31
SREK1-208ENST00000520580 BCL11BQ9C0K0 894 aaPredicted RBP6.88□□□□□ -1.31
SREK1-208ENST00000520580 DSG3P32926 999 aa6.88□□□□□ -1.31
SREK1-208ENST00000520580 NUBP1P53384 320 aa6.88□□□□□ -1.31
SREK1-208ENST00000520580 KCNV2Q8TDN2 545 aa6.87□□□□□ -1.31
SREK1-208ENST00000520580 BRPF1P55201 1214 aaPredicted RBP6.87□□□□□ -1.31
SREK1-208ENST00000520580 P3H3Q8IVL6 736 aa6.87□□□□□ -1.31
SREK1-208ENST00000520580 VGFO15240 615 aaPredicted RBP6.86□□□□□ -1.31
SREK1-208ENST00000520580 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.86□□□□□ -1.31
SREK1-208ENST00000520580 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.86□□□□□ -1.31
SREK1-208ENST00000520580 ZFP91Q96JP5 570 aaPredicted RBP6.86□□□□□ -1.31
SREK1-208ENST00000520580 CADPS2Q86UW7 1296 aa6.82□□□□□ -1.32
SREK1-208ENST00000520580 WDR70Q9NW82 654 aa6.82□□□□□ -1.32
SREK1-208ENST00000520580 NEUROD2Q15784 382 aa6.82□□□□□ -1.32
SREK1-208ENST00000520580 FAM212AQ96EL1 285 aa6.82□□□□□ -1.32
SREK1-208ENST00000520580 PYGBP11216 843 aa6.8□□□□□ -1.32
SREK1-208ENST00000520580 RYDENQ9NUL5 291 aaKnown RBP6.8□□□□□ -1.32
SREK1-208ENST00000520580 SLC24A3Q9HC58 644 aa6.78□□□□□ -1.32
SREK1-208ENST00000520580 RASEFQ8IZ41 740 aa6.77□□□□□ -1.33
SREK1-208ENST00000520580 ZC3H15Q8WU90 426 aaKnown RBP6.76□□□□□ -1.33
SREK1-208ENST00000520580 PODXL2Q9NZ53 605 aa6.75□□□□□ -1.33
SREK1-208ENST00000520580 SEMA3EO15041 775 aa6.73□□□□□ -1.33
SREK1-208ENST00000520580 SGIP1Q9BQI5 828 aa6.73□□□□□ -1.33
SREK1-208ENST00000520580 CLEC11AQ9Y240 323 aa6.73□□□□□ -1.33
SREK1-208ENST00000520580 CHRM1P11229 460 aaPredicted RBP6.72□□□□□ -1.33
SREK1-208ENST00000520580 MNX1P50219 401 aaPredicted RBP6.72□□□□□ -1.33
SREK1-208ENST00000520580 UBTFP17480 764 aaKnown RBP6.72□□□□□ -1.33
SREK1-208ENST00000520580 CREBZFQ9NS37 354 aa6.71□□□□□ -1.34
SREK1-208ENST00000520580 PRR29P0C7W0 189 aa6.68□□□□□ -1.34
SREK1-208ENST00000520580 ARHGEF1Q92888 912 aaKnown RBP6.67□□□□□ -1.34
SREK1-208ENST00000520580 E2F4Q16254 413 aa6.66□□□□□ -1.34
SREK1-208ENST00000520580 SPDYE1Q8NFV5 336 aaPredicted RBP6.65□□□□□ -1.34
SREK1-208ENST00000520580 MFRPQ9BY79 579 aa6.65□□□□□ -1.35
SREK1-208ENST00000520580 GPBP1L1Q9HC44 474 aaPredicted RBP6.65□□□□□ -1.35
SREK1-208ENST00000520580 TESPA1A2RU30 521 aaPredicted RBP6.64□□□□□ -1.35
SREK1-208ENST00000520580 PPP1R37O75864 691 aa6.64□□□□□ -1.35
SREK1-208ENST00000520580 ZMYND10O75800 440 aa6.63□□□□□ -1.35
SREK1-208ENST00000520580 ARID3AQ99856 593 aa6.63□□□□□ -1.35
SREK1-208ENST00000520580 IL27Q8NEV9 243 aa6.62□□□□□ -1.35
SREK1-208ENST00000520580 PCDHB8Q9UN66 801 aa6.62□□□□□ -1.35
SREK1-208ENST00000520580 PCDHB13Q9Y5F0 798 aa6.62□□□□□ -1.35
SREK1-208ENST00000520580 TRIM26Q12899 539 aaPredicted RBP6.62□□□□□ -1.35
SREK1-208ENST00000520580 TSPYL2Q9H2G4 693 aaPredicted RBP6.61□□□□□ -1.35
SREK1-208ENST00000520580 RANGAP1P46060 587 aaPredicted RBP6.6□□□□□ -1.35
SREK1-208ENST00000520580 PDAP1Q13442 181 aaKnown RBP6.59□□□□□ -1.35
SREK1-208ENST00000520580 ZNF467Q7Z7K2 595 aaPredicted RBP6.59□□□□□ -1.35
SREK1-208ENST00000520580 ZMYND15Q9H091 742 aa6.58□□□□□ -1.36
SREK1-208ENST00000520580 NCKAP5LQ9HCH0 1330 aa6.56□□□□□ -1.36
SREK1-208ENST00000520580 RBM26Q5T8P6 1007 aaKnown RBP6.55□□□□□ -1.36
SREK1-208ENST00000520580 BARGINQ6ZT62 677 aa6.55□□□□□ -1.36
SREK1-208ENST00000520580 LARP6Q9BRS8 491 aaKnown RBP6.55□□□□□ -1.36
SREK1-208ENST00000520580 HRCP23327 699 aa6.55□□□□□ -1.36
SREK1-208ENST00000520580 PSEN1P49768 467 aa6.55□□□□□ -1.36
SREK1-208ENST00000520580 SMYD5Q6GMV2 418 aa6.55□□□□□ -1.36
SREK1-208ENST00000520580 KRI1Q8N9T8 703 aaKnown RBP6.55□□□□□ -1.36
SREK1-208ENST00000520580 RSPH6AQ9H0K4 717 aa6.55□□□□□ -1.36
SREK1-208ENST00000520580 EFCAB3Q8N7B9 438 aa6.54□□□□□ -1.36
SREK1-208ENST00000520580 KDM4CQ9H3R0 1056 aa6.54□□□□□ -1.36
SREK1-208ENST00000520580 PHF8Q9UPP1 1060 aa6.54□□□□□ -1.36
SREK1-208ENST00000520580 ARID3CA6NKF2 412 aa6.53□□□□□ -1.36
SREK1-208ENST00000520580 AK7Q96M32 723 aa6.53□□□□□ -1.36
SREK1-208ENST00000520580 REM2Q8IYK8 340 aaPredicted RBP6.52□□□□□ -1.37
SREK1-208ENST00000520580 FBXO22Q8NEZ5 403 aa6.52□□□□□ -1.37
SREK1-208ENST00000520580 C1orf115Q9H7X2 142 aa6.52□□□□□ -1.37
SREK1-208ENST00000520580 CABP2Q9NPB3 220 aa6.52□□□□□ -1.37
SREK1-208ENST00000520580 MLLT3P42568 568 aaPredicted RBP6.52□□□□□ -1.37
SREK1-208ENST00000520580 AKT1S1Q96B36 256 aa6.52□□□□□ -1.37
SREK1-208ENST00000520580 CHADLQ6NUI6 762 aa6.51□□□□□ -1.37
SREK1-208ENST00000520580 GPIHBP1Q8IV16 184 aa6.51□□□□□ -1.37
SREK1-208ENST00000520580 NPM2Q86SE8 214 aaKnown RBP6.5□□□□□ -1.37
SREK1-208ENST00000520580 NLRP6P59044 892 aa6.5□□□□□ -1.37
SREK1-208ENST00000520580 MKRN3Q13064 507 aaKnown RBP6.5□□□□□ -1.37
SREK1-208ENST00000520580 DDX27Q96GQ7 796 aaKnown RBP6.49□□□□□ -1.37
SREK1-208ENST00000520580 PDE4DQ08499 809 aa6.48□□□□□ -1.37
SREK1-208ENST00000520580 APBB1O00213 710 aa6.47□□□□□ -1.37
SREK1-208ENST00000520580 TRIM66O15016 1216 aa6.47□□□□□ -1.37
SREK1-208ENST00000520580 PDE4AP27815 886 aa6.47□□□□□ -1.37
SREK1-208ENST00000520580 FAM117AQ9C073 453 aa6.47□□□□□ -1.37
SREK1-208ENST00000520580 PITPNM1O00562 1244 aa6.46□□□□□ -1.37
SREK1-208ENST00000520580 IFNL1Q8IU54 200 aa6.46□□□□□ -1.37
SREK1-208ENST00000520580 CCDC61Q9Y6R9 512 aa6.46□□□□□ -1.38
SREK1-208ENST00000520580 ZNF579Q8NAF0 562 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms