RNA–Protein interactions for RNA: ENST00000520549.1

IRGM-201, Transcript of immunity related GTPase M, humanhuman

TSL 1 (best)

Gene IRGM, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRGM-201ENST00000520549 MIER1Q8N108 512 aa18.88■□□□□ 0.61
IRGM-201ENST00000520549 CCDC61Q9Y6R9 512 aa18.88■□□□□ 0.61
IRGM-201ENST00000520549 ATMINO43313 823 aaPredicted RBP18.85■□□□□ 0.61
IRGM-201ENST00000520549 METRNQ9UJH8 293 aa18.82■□□□□ 0.6
IRGM-201ENST00000520549 SLC39A7Q92504 469 aa18.81■□□□□ 0.6
IRGM-201ENST00000520549 KIF12Q96FN5 646 aa18.78■□□□□ 0.6
IRGM-201ENST00000520549 C7P10643 843 aa18.77■□□□□ 0.6
IRGM-201ENST00000520549 RASEFQ8IZ41 740 aa18.73■□□□□ 0.59
IRGM-201ENST00000520549 PLCD3Q8N3E9 789 aa18.71■□□□□ 0.59
IRGM-201ENST00000520549 ATN1P54259 1190 aaPredicted RBP18.7■□□□□ 0.58
IRGM-201ENST00000520549 MAP3K13O43283 966 aa18.67■□□□□ 0.58
IRGM-201ENST00000520549 BMP2KQ9NSY1 1161 aaPredicted RBP18.63■□□□□ 0.57
IRGM-201ENST00000520549 ZBTB47Q9UFB7 747 aaPredicted RBP18.61■□□□□ 0.57
IRGM-201ENST00000520549 TRPC6Q9Y210 931 aa18.61■□□□□ 0.57
IRGM-201ENST00000520549 POTEJP0CG39 1038 aa18.59■□□□□ 0.57
IRGM-201ENST00000520549 MAMSTRQ6ZN01 415 aa18.59■□□□□ 0.57
IRGM-201ENST00000520549 TIE1P35590 1138 aa18.58■□□□□ 0.56
IRGM-201ENST00000520549 PLSCR2Q9NRY7 297 aa18.57■□□□□ 0.56
IRGM-201ENST00000520549 FKBP8Q14318 412 aa18.55■□□□□ 0.56
IRGM-201ENST00000520549 POTEMA6NI47 508 aa18.5■□□□□ 0.55
IRGM-201ENST00000520549 NUBP1P53384 320 aa18.49■□□□□ 0.55
IRGM-201ENST00000520549 SCUBE2Q9NQ36 999 aa18.49■□□□□ 0.55
IRGM-201ENST00000520549 SGIP1Q9BQI5 828 aa18.48■□□□□ 0.55
IRGM-201ENST00000520549 TTLL13PA6NNM8 815 aa18.47■□□□□ 0.55
IRGM-201ENST00000520549 PCDHB13Q9Y5F0 798 aa18.47■□□□□ 0.55
IRGM-201ENST00000520549 POTEFA5A3E0 1075 aa18.46■□□□□ 0.55
IRGM-201ENST00000520549 POTEGQ6S5H5 508 aa18.45■□□□□ 0.54
IRGM-201ENST00000520549 FAM212AQ96EL1 285 aa18.42■□□□□ 0.54
IRGM-201ENST00000520549 SEC24BO95487 1268 aa18.4■□□□□ 0.54
IRGM-201ENST00000520549 TRIM35Q9UPQ4 493 aa18.37■□□□□ 0.53
IRGM-201ENST00000520549 COLQQ9Y215 455 aaPredicted RBP18.35■□□□□ 0.53
IRGM-201ENST00000520549 IFNL1Q8IU54 200 aa18.34■□□□□ 0.53
IRGM-201ENST00000520549 IER5LQ5T953 404 aa18.32■□□□□ 0.52
IRGM-201ENST00000520549 FAM163AQ96GL9 167 aaPredicted RBP18.28■□□□□ 0.52
IRGM-201ENST00000520549 TMEM106CQ9BVX2 250 aa18.25■□□□□ 0.51
IRGM-201ENST00000520549 FBXO3Q9UK99 471 aa18.25■□□□□ 0.51
IRGM-201ENST00000520549 LCE2DQ5TA82 110 aaPredicted RBP18.23■□□□□ 0.51
IRGM-201ENST00000520549 DCAF8Q5TAQ9 597 aa18.22■□□□□ 0.51
IRGM-201ENST00000520549 PCDH10Q9P2E7 1040 aa18.22■□□□□ 0.51
IRGM-201ENST00000520549 PYGBP11216 843 aa18.16■□□□□ 0.5
IRGM-201ENST00000520549 PLCG2P16885 1265 aa18.13■□□□□ 0.49
IRGM-201ENST00000520549 IRX5P78411 483 aaPredicted RBP18.06■□□□□ 0.48
IRGM-201ENST00000520549 SLAIN1Q8ND83 568 aa18.05■□□□□ 0.48
IRGM-201ENST00000520549 KLHL34Q8N239 644 aa18.04■□□□□ 0.48
IRGM-201ENST00000520549 PCDHB8Q9UN66 801 aa18.04■□□□□ 0.48
IRGM-201ENST00000520549 VASPP50552 380 aaPredicted RBP18.02■□□□□ 0.48
IRGM-201ENST00000520549 GSE1Q14687 1217 aa17.98■□□□□ 0.47
IRGM-201ENST00000520549 OCEL1Q9H607 264 aa17.98■□□□□ 0.47
IRGM-201ENST00000520549 ZNF467Q7Z7K2 595 aaPredicted RBP17.91■□□□□ 0.46
IRGM-201ENST00000520549 ST18O60284 1047 aa17.87■□□□□ 0.45
IRGM-201ENST00000520549 CDAN1Q8IWY9 1227 aa17.84■□□□□ 0.45
IRGM-201ENST00000520549 GOLGA2Q08379 1002 aa17.83■□□□□ 0.44
IRGM-201ENST00000520549 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.83■□□□□ 0.44
IRGM-201ENST00000520549 CHRM1P11229 460 aaPredicted RBP17.82■□□□□ 0.44
IRGM-201ENST00000520549 MKRN3Q13064 507 aaKnown RBP17.79■□□□□ 0.44
IRGM-201ENST00000520549 PDCD7Q8N8D1 485 aaKnown RBP17.75■□□□□ 0.43
IRGM-201ENST00000520549 SNPHO15079 494 aa17.74■□□□□ 0.43
IRGM-201ENST00000520549 PSEN1P49768 467 aa17.74■□□□□ 0.43
IRGM-201ENST00000520549 C3orf67Q6ZVT6 689 aa17.69■□□□□ 0.42
IRGM-201ENST00000520549 L3MBTL3Q96JM7 780 aaPredicted RBP17.69■□□□□ 0.42
IRGM-201ENST00000520549 TMEM121BQ9BXQ6 578 aaPredicted RBP17.69■□□□□ 0.42
IRGM-201ENST00000520549 SPOCK2Q92563 424 aa17.68■□□□□ 0.42
IRGM-201ENST00000520549 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.68■□□□□ 0.42
IRGM-201ENST00000520549 IFNLR1Q8IU57 520 aaPredicted RBP17.66■□□□□ 0.42
IRGM-201ENST00000520549 CIZ1Q9ULV3 898 aaPredicted RBP17.66■□□□□ 0.42
IRGM-201ENST00000520549 PDAP1Q13442 181 aaKnown RBP17.65■□□□□ 0.42
IRGM-201ENST00000520549 MARVELD3Q96A59 401 aa17.56■□□□□ 0.4
IRGM-201ENST00000520549 CABP2Q9NPB3 220 aa17.55■□□□□ 0.4
IRGM-201ENST00000520549 ILDR1Q86SU0 546 aaPredicted RBP17.53■□□□□ 0.4
IRGM-201ENST00000520549 DPY19L2Q6NUT2 758 aa17.48■□□□□ 0.39
IRGM-201ENST00000520549 G3V3G9 751 aa17.46■□□□□ 0.39
IRGM-201ENST00000520549 EMP3P54852 163 aa17.44■□□□□ 0.38
IRGM-201ENST00000520549 BOLA1Q9Y3E2 137 aa17.42■□□□□ 0.38
IRGM-201ENST00000520549 SPNS2Q8IVW8 549 aa17.4■□□□□ 0.38
IRGM-201ENST00000520549 TRIM41Q8WV44 630 aa17.38■□□□□ 0.37
IRGM-201ENST00000520549 MMRN1Q13201 1228 aa17.37■□□□□ 0.37
IRGM-201ENST00000520549 HS3ST6Q96QI5 342 aa17.32■□□□□ 0.36
IRGM-201ENST00000520549 FAM205CA6NFA0 338 aa17.31■□□□□ 0.36
IRGM-201ENST00000520549 EFCAB3Q8N7B9 438 aa17.29■□□□□ 0.36
IRGM-201ENST00000520549 POTEB3A0JP26 581 aa17.25■□□□□ 0.35
IRGM-201ENST00000520549 POTEBQ6S5H4 581 aa17.25■□□□□ 0.35
IRGM-201ENST00000520549 HOXB3P14651 431 aaPredicted RBP17.24■□□□□ 0.35
IRGM-201ENST00000520549 ZNF710Q8N1W2 664 aa17.21■□□□□ 0.35
IRGM-201ENST00000520549 KRTAP3-3Q9BYR6 98 aa17.2■□□□□ 0.34
IRGM-201ENST00000520549 KRTAP3-2Q9BYR7 98 aa17.2■□□□□ 0.34
IRGM-201ENST00000520549 DOK7Q18PE1 504 aa17.18■□□□□ 0.34
IRGM-201ENST00000520549 RIOK3O14730 519 aaKnown RBP17.16■□□□□ 0.34
IRGM-201ENST00000520549 HOXB1P14653 301 aaPredicted RBP17.15■□□□□ 0.34
IRGM-201ENST00000520549 SOX12O15370 315 aa17.12■□□□□ 0.33
IRGM-201ENST00000520549 MICALL2Q8IY33 904 aa17.12■□□□□ 0.33
IRGM-201ENST00000520549 RNF25Q96BH1 459 aaPredicted RBP17.12■□□□□ 0.33
IRGM-201ENST00000520549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.1■□□□□ 0.33
IRGM-201ENST00000520549 RIMBP2O15034 1052 aa17.1■□□□□ 0.33
IRGM-201ENST00000520549 ZFP91Q96JP5 570 aaPredicted RBP17.1■□□□□ 0.33
IRGM-201ENST00000520549 VGFO15240 615 aaPredicted RBP17.09■□□□□ 0.33
IRGM-201ENST00000520549 ERBB3P21860 1342 aa17.08■□□□□ 0.32
IRGM-201ENST00000520549 TMEM92Q6UXU6 159 aa17.04■□□□□ 0.32
IRGM-201ENST00000520549 MS4A4AQ96JQ5 239 aa17.03■□□□□ 0.32
IRGM-201ENST00000520549 PHF8Q9UPP1 1060 aa17.03■□□□□ 0.32
IRGM-201ENST00000520549 ZSWIM6Q9HCJ5 1215 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms